RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Med12A2AGH6 2190 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Igkv5-37A0A140T8N4 115 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm28038F7BCN9 126 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm20726G3UX18 150 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 CntfrO88507 372 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 P18530 117 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 C1qcQ02105 246 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 4930518I15RikQ3V2W7 57 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Cxxc4Q6NXI8 198 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Mrpl55Q9CZ83 127 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Znf414Q9DCK4 299 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Med12lQ8BQM9 2157 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Znf575Q3TXZ1 239 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Lypd1Q8BLC3 141 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Lyzl6Q9DA11 148 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Trav5-1A0A075B5Z7 114 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 9830107B12RikD3Z5D6 160 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 KncnQ307W7 124 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Tcf15Q60756 195 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Defb22Q8BVC1 179 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm17334Q8C6U3 126 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Immp1lQ9CQU8 166 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 P01724 129 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 P01725 110 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Hist1h4aP62806 103 aaKnown RBP7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Defb47Q30KN1 79 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 D130052B06RikQ3UW13 202 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Plxdc1Q91ZV7 500 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Cysrt1Q9D1E4 142 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Tmem89Q9DA04 169 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm26938S4R185 226 aa7.5□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Myo7aP97479 2215 aa7.49□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Vma21-psA0A140T8R2 101 aa7.49□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Ovol3D3YYM0 189 aa7.49□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Ormdl2Q9CQZ0 153 aa7.49□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Lyg1Q9D7Q0 197 aa7.49□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Fstl3Q9EQC7 256 aa7.49□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Dusp13Q9QYJ7 198 aa7.49□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 KprpB2RUR4 657 aa7.48□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Zfp248Q640N4 576 aa7.48□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Defb6Q91VD6 63 aa7.48□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Wnk2Q3UH66 2149 aa7.48□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Trav7-6A0A075B640 112 aa7.48□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm37389A0A0A6YW05 95 aa7.48□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Ighv1-9A0A0A6YW37 117 aa7.48□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Ntn5Q3UQ22 452 aa7.48□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Ndufa4l2Q4FZG9 87 aa7.48□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 P01729 129 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 P06329 120 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Pde6hP61249 83 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm9936Q8C864 160 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Q8R092 253 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Npc2Q9Z0J0 149 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Dchs2A0A0A6YW72 3346 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 H2al1bA0A087WP11 105 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Shisal2aA2A9G7 189 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 H2al1kJ3QP08 105 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Foxi2Q3I5G5 311 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Sdhaf1Q3U276 118 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 H2al1eQ810S6 105 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 NpbQ8K4P1 119 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Cd164l2Q9D6W7 172 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 H2al1mQ9DAD9 105 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Esm1Q9QYY7 184 aa7.47□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 P01806 116 aa7.46□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Edn2P22389 175 aa7.46□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Folr2Q05685 251 aa7.46□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Ifitm10Q8BR26 201 aa7.46□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 CenpfE9Q3P4 2997 aaKnown RBP7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 7530416G11RikJ3QJX6 159 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Igf1P05017 153 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 P84751 237 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Cdx4Q07424 282 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Nxph1Q61200 271 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 S100a15aQ6S5I3 108 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Znrd1Q791N7 123 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Znf239P24399 201 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Cox7a2P48771 83 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Eif4ebp1Q60876 117 aa7.46□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Kiaa1549Q68FD9 1940 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 AcanQ61282 2132 aaKnown RBP7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Trav9-1A0A075B601 112 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Ighv1-23A0A0A6YVW3 117 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Tmem240B2RWJ3 173 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 P01783 136 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 P01811 117 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Ighv3-6P18531 116 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Gm10384Q3UQ87 92 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 EpopQ7TNS8 369 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 D330020A13RikQ8C799 211 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 C920008G01RikA0A0B4J1N1 112 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 P01820 115 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Gm13199Q8C8E0 125 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Znrf1Q91V17 227 aa7.45□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Klk1b4P00757 256 aa7.44□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Sec61gP60060 68 aa7.44□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Q9CQ90 155 aa7.44□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Rnase4Q9JJH1 148 aa7.44□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Olfr313Q5NC55 308 aa7.43□□□□□ -1.22
Hmgb1-201ENSMUST00000085546 Cox6cQ9CPQ1 76 aa7.43□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms