RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Srsf9Q9D0B0 222 aaKnown RBP7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Rbmxl2Q9DAE2 385 aaKnown RBP7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Tcrg-V6A0A075B5Y8 134 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 LoxP28301 411 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Mrpl36Q99N90 102 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 TroQ6DIC6 2087 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Ighv1-62-3P01754 117 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Plscr4P58196 326 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 MycbQ6P8Z1 170 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Lypd1Q8BLC3 141 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Tmem129Q8K304 362 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Tomm6Q9CQN3 74 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Cend1Q9JKC6 149 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 BC107364E9Q5A2 140 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Thy1P01831 162 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 P04944 107 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 A730015C16RikQ8C992 119 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Prss41Q920S2 322 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Dusp14Q9JLY7 198 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Abca2P41234 2434 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Abca12E9Q876 2595 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gm20481G3UXK4 153 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gm26727M0QWT1 121 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Pde6hP61249 83 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Dmrtc2Q8CGW9 370 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gtsf1lQ9CWD0 151 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Ighv1-22A0A075B5U7 117 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Mtatp8P03930 67 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 OtorQ9JIE3 128 aa7.59□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Olfr1209Q3SXJ3 310 aa7.59□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 9130230L23RikQ8CC80 163 aa7.59□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Rasl10aQ8K5A4 203 aa7.59□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Q9D131 166 aa7.59□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Ighv3-8A0A075B5T0 131 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 NpsP0C0P8 89 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 GlrxQ9QUH0 107 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Brwd1Q921C3 2304 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 PolP10400 120 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Reg1P43137 165 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 PlnP61014 52 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 BtcQ05928 177 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm26566Q8CAC1 153 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Uqcrfs1Q9CR68 274 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Fam241bQ9D882 120 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gnb1lQ9EQ15 326 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm5150Q1AN92 299 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Pgpep1lQ9CWB5 130 aa7.58□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Rtl10D3YWW5 146 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Olfr322Q5NCC8 327 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Rchy1Q9CR50 261 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 ApomQ9Z1R3 190 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Adrb3P25962 400 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Spsb3Q571F5 354 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Msrb2Q78J03 175 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 AcanQ61282 2132 aaKnown RBP7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm33815A0A087WNV3 176 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm29644A0A087WPG2 191 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm10521E9PZK0 135 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Olfr317Q5NCD6 327 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Prrc2aQ7TSC1 2158 aaKnown RBP7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Klk7Q91VE3 249 aa7.57□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Trav14-2A0A075B694 121 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Trbv14A0A140T8L9 115 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm45521A0A1B0GRK0 198 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Srsf1Q6PDM2 248 aaKnown RBP7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Parm1Q923D3 296 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Wfdc2Q9DAU7 174 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Slamf6Q9ET39 351 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Ankhd1E9PUR0 2548 aaKnown RBP7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 S100a8P27005 89 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Hint1P70349 126 aaKnown RBP7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Obox1Q9D350 204 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Ndufa11Q9D8B4 141 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Adgrg4B7ZCC9 3073 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Ighv1-20A0A0A6YX66 117 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Igkv20-101-2A0A0G2JDU3 113 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 P01756 117 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 P01757 117 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm10604Q3V0X7 143 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Tmem89Q9DA04 169 aa7.56□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 P06330 118 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm21370Q3T9V6 190 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Ang5Q5GAN1 145 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Hspe1Q64433 102 aaKnown RBP7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gp9O88186 177 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Minos1Q7TNS2 76 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Brd3osA0A1B0GRB6 84 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Nsun4C4P6S0 806 aaKnown RBP7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm9970F6ZED4 185 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Cela2aP05208 271 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 P06334 169 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm17334Q8C6U3 126 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Ndufc2Q9CQ54 120 aa7.55□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Ighv1-80A0A075B5Y3 117 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 CrxO54751 299 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 NrgnP60761 78 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 NrepQ07475 68 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Ramp1Q9WTJ5 148 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Nav3Q80TN7 2359 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm28038F7BCN9 126 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms