RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Ighv1-62-2A0A0A6YXZ4 119 aa11.5□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Gm12888Q3UW77 119 aa11.5□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Prr9Q8BV84 116 aa11.5□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Arl3Q9WUL7 182 aa11.5□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 P01724 129 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 BtcQ05928 177 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Gng7Q61016 68 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Zfp248Q640N4 576 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Ly6g5bQ8K1T4 194 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Hspb8Q9JK92 196 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 TroQ6DIC6 2087 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Ighv1-62-3P01754 117 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 H2-DMb1P35737 261 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Fhl1P97447 280 aaKnown RBP11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Hist1h1tQ07133 208 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Rasl11bQ922H7 247 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Ighv1-16A0A075B5U1 98 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Smad7O35253 426 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Psmg4P0C7N9 123 aa11.49□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Trav16d-dv11A0A075B617 117 aa11.48□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Gm45521A0A1B0GRK0 198 aa11.48□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Il22ra1Q80XZ4 581 aa11.48□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Znf787Q8BIF9 381 aa11.48□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Gm16442D3YZG3 307 aa11.48□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 P01820 115 aa11.48□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Vps25Q9CQ80 176 aa11.48□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 RhohQ9D3G9 191 aa11.48□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Itpr3P70227 2670 aa11.48□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Ins2P01326 110 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 NpsP0C0P8 89 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Edn2P22389 175 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Tmem88bQ3TYP4 173 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Ighv1-80A0A075B5Y3 117 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Vsig4F6TUL9 280 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Gm10604Q3V0X7 143 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Ang5Q5GAN1 145 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Clec4b2Q67DU8 208 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Hif1anQ8BLR9 349 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Dpm3Q9D1Q4 92 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Gm26938S4R185 226 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Igkv20-101-2A0A0G2JDU3 113 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 BC107364E9Q5A2 140 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Q4KKZ1 196 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Gpx7Q99LJ6 186 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Spink12Q9D256 87 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 OtorQ9JIE3 128 aa11.47□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Igkv4-57-1A0A075B5M4 119 aa11.46□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Adrb3P25962 400 aa11.46□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Odf1Q61999 247 aa11.46□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Slc35d2Q762D5 326 aa11.46□□□□□ -0.57
Nkx3-1-201ENSMUST00000022646 Igkv4-71A0A0G2JEH0 117 aa11.46□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 PlnP61014 52 aa11.46□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Gm94Q3V2D2 93 aa11.46□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Taf15Q8BQ46 557 aaKnown RBP11.46□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Gng4P50153 75 aa11.45□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Ndufc2Q9CQ54 120 aa11.45□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Dido1Q8C9B9 2256 aaKnown RBP11.45□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Plscr4P58196 326 aa11.45□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Gm6040Q4QY32 63 aa11.45□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 G0s2Q61585 103 aa11.45□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Psmb11Q8BG41 302 aa11.45□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Rpl11Q9CXW4 178 aaKnown RBP11.45□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 P06330 118 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Tex48Q9DA81 110 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 CtrlQ9ER05 264 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Nit2Q9JHW2 276 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Slc25a20Q9Z2Z6 301 aaKnown RBP11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Prrc2aQ7TSC1 2158 aaKnown RBP11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Ighv1-9A0A0A6YW37 117 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Igkv4-70A0A0B4J1I5 116 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Tcte2E9PY37 120 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Emp2O88662 172 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Spock3Q8BKV0 436 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 SNORCQ9CXL7 121 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Dusp14Q9JLY7 198 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 AcacbE9Q4Z2 2448 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 P01801 115 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Khdc1cQ4KL78 166 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Sec11aQ9R0P6 179 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 OtoglF7A4A7 2325 aa11.44□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Ighv1-82A0A0G2JEU7 117 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Tcl1b4P56844 120 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 BlcapP62951 87 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 TctaQ8VEA7 122 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Olfr498Q8VEW2 330 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Obox1Q9D350 204 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Lelp1Q9DAE3 120 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Gnb1lQ9EQ15 326 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 P01727 129 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 NrgnP60761 78 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Atp6v0bQ91V37 205 aa11.43□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Gm10521E9PZK0 135 aa11.42□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Tctex1d4Q8CDY7 219 aa11.42□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Vmn1r197Q8R265 298 aa11.42□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Tmem8bB1AWJ5 472 aa11.42□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Olfr311Q5NC59 308 aa11.42□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Samd10Q7TST3 202 aa11.42□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Smim13E9Q942 88 aa11.42□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 Defa9P50707 93 aa11.42□□□□□ -0.58
Nkx3-1-201ENSMUST00000022646 PpdpfQ9CR37 115 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms