RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ADM2Q7Z4H4 148 aa8.79□□□□□ -1
PHGDH-216ENST00000641375 RPL37P61927 97 aaKnown RBP8.78□□□□□ -1
PHGDH-216ENST00000641375 J3QL48 77 aa8.77□□□□□ -1.01
PHGDH-216ENST00000641375 ABCA13Q86UQ4 5058 aa8.77□□□□□ -1.01
PHGDH-216ENST00000641375 HERC2O95714 4834 aa8.76□□□□□ -1.01
PHGDH-216ENST00000641375 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
PHGDH-216ENST00000641375 SPATA8Q6RVD6 105 aa8.76□□□□□ -1.01
PHGDH-216ENST00000641375 DMAC1Q96GE9 116 aa8.76□□□□□ -1.01
PHGDH-216ENST00000641375 ACYP2P14621 99 aa8.75□□□□□ -1.01
PHGDH-216ENST00000641375 A0A1B0GU69 56 aa8.66□□□□□ -1.02
PHGDH-216ENST00000641375 MIR22HGQ0VDD5 57 aa8.63□□□□□ -1.03
PHGDH-216ENST00000641375 UQCR11O14957 56 aa8.62□□□□□ -1.03
PHGDH-216ENST00000641375 CSAG1Q6PB30 78 aa8.59□□□□□ -1.03
PHGDH-216ENST00000641375 COX6B2Q6YFQ2 88 aa8.53□□□□□ -1.04
PHGDH-216ENST00000641375 LPAP08519 4548 aa8.52□□□□□ -1.04
PHGDH-216ENST00000641375 LRP2P98164 4655 aa8.52□□□□□ -1.05
PHGDH-216ENST00000641375 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
PHGDH-216ENST00000641375 SEC61BP60468 96 aaKnown RBP8.46□□□□□ -1.06
PHGDH-216ENST00000641375 PCLOQ9Y6V0 5065 aa8.45□□□□□ -1.06
PHGDH-216ENST00000641375 ROMO1P60602 79 aa8.35□□□□□ -1.07
PHGDH-216ENST00000641375 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
PHGDH-216ENST00000641375 H1FX-AS1Q4G0G2 97 aa8.29□□□□□ -1.08
PHGDH-216ENST00000641375 HERC1Q15751 4861 aa8.27□□□□□ -1.08
PHGDH-216ENST00000641375 S4R3F8 94 aa8.27□□□□□ -1.09
PHGDH-216ENST00000641375 MUC17Q685J3 4493 aa8.22□□□□□ -1.09
PHGDH-216ENST00000641375 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
PHGDH-216ENST00000641375 HMCN2Q8NDA2 5059 aa8.2□□□□□ -1.1
PHGDH-216ENST00000641375 KRTAP4-1Q9BYQ7 146 aa8.2□□□□□ -1.1
PHGDH-216ENST00000641375 H0YAA0 97 aa8.15□□□□□ -1.11
PHGDH-216ENST00000641375 P0C880 135 aa8.08□□□□□ -1.12
PHGDH-216ENST00000641375 A0A1B0GU33 70 aa8.04□□□□□ -1.12
PHGDH-216ENST00000641375 KRTAP19-2Q3LHN2 52 aa8.01□□□□□ -1.13
PHGDH-216ENST00000641375 MUC2Q02817 5179 aa8□□□□□ -1.13
PHGDH-216ENST00000641375 K7ERS5 55 aa7.99□□□□□ -1.13
PHGDH-216ENST00000641375 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-216ENST00000641375 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
PHGDH-216ENST00000641375 CRIPTQ9P021 101 aa7.87□□□□□ -1.15
PHGDH-216ENST00000641375 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
PHGDH-216ENST00000641375 UBR4Q5T4S7 5183 aa7.83□□□□□ -1.16
PHGDH-216ENST00000641375 SPINT4Q6UDR6 99 aa7.83□□□□□ -1.16
PHGDH-216ENST00000641375 RNF213Q63HN8 5207 aa7.78□□□□□ -1.16
PHGDH-216ENST00000641375 LCE2CQ5TA81 110 aa7.77□□□□□ -1.17
PHGDH-216ENST00000641375 KRTAP15-1Q3LI76 137 aa7.76□□□□□ -1.17
PHGDH-216ENST00000641375 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
PHGDH-216ENST00000641375 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
PHGDH-216ENST00000641375 M0QZ58 72 aa7.73□□□□□ -1.17
PHGDH-216ENST00000641375 R4GN34 69 aa7.64□□□□□ -1.19
PHGDH-216ENST00000641375 A0A0D9SG42 100 aa7.63□□□□□ -1.19
PHGDH-216ENST00000641375 FAT4Q6V0I7 4981 aa7.63□□□□□ -1.19
PHGDH-216ENST00000641375 MT1HP80294 61 aa7.62□□□□□ -1.19
PHGDH-216ENST00000641375 M0R2T5 61 aa7.6□□□□□ -1.19
PHGDH-216ENST00000641375 A0A0A0MQY5 61 aa7.56□□□□□ -1.2
PHGDH-216ENST00000641375 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-216ENST00000641375 C10orf95Q9H7T3 257 aa7.54□□□□□ -1.2
PHGDH-216ENST00000641375 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
PHGDH-216ENST00000641375 KRTAP12-2P59991 146 aa7.46□□□□□ -1.21
PHGDH-216ENST00000641375 KRTAP9-8Q9BYQ0 159 aa7.36□□□□□ -1.23
PHGDH-216ENST00000641375 MT2AP02795 61 aa7.35□□□□□ -1.23
PHGDH-216ENST00000641375 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
PHGDH-216ENST00000641375 MT1FP04733 61 aa7.3□□□□□ -1.24
PHGDH-216ENST00000641375 SPRR2GQ9BYE4 73 aa7.3□□□□□ -1.24
PHGDH-216ENST00000641375 LUZP6Q538Z0 58 aa7.29□□□□□ -1.24
PHGDH-216ENST00000641375 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
PHGDH-216ENST00000641375 LCE2AQ5TA79 106 aaPredicted RBP7.21□□□□□ -1.26
PHGDH-216ENST00000641375 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
PHGDH-216ENST00000641375 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
PHGDH-216ENST00000641375 KRTAP9-3Q9BYQ3 159 aa7.09□□□□□ -1.27
PHGDH-216ENST00000641375 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
PHGDH-216ENST00000641375 MT1BP07438 61 aa6.95□□□□□ -1.3
PHGDH-216ENST00000641375 LCE2BO14633 110 aa6.85□□□□□ -1.31
PHGDH-216ENST00000641375 TNP1P09430 55 aa6.85□□□□□ -1.31
PHGDH-216ENST00000641375 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
PHGDH-216ENST00000641375 MT1XP80297 61 aa6.76□□□□□ -1.33
PHGDH-216ENST00000641375 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
PHGDH-216ENST00000641375 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
PHGDH-216ENST00000641375 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
PHGDH-216ENST00000641375 USH2AO75445 5202 aa6.62□□□□□ -1.35
PHGDH-216ENST00000641375 SPRR5A0A1B0GTR4 108 aa6.6□□□□□ -1.35
PHGDH-216ENST00000641375 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-216ENST00000641375 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-216ENST00000641375 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
PHGDH-216ENST00000641375 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
PHGDH-216ENST00000641375 SSPOA2VEC9 5147 aa6.42□□□□□ -1.38
PHGDH-216ENST00000641375 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
PHGDH-216ENST00000641375 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
PHGDH-216ENST00000641375 INE1O15225 51 aa6.33□□□□□ -1.4
PHGDH-216ENST00000641375 FSIP2Q5CZC0 6907 aa6.29□□□□□ -1.4
PHGDH-216ENST00000641375 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
PHGDH-216ENST00000641375 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
PHGDH-216ENST00000641375 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
PHGDH-216ENST00000641375 KMT2DO14686 5537 aa6.19□□□□□ -1.42
PHGDH-216ENST00000641375 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
PHGDH-216ENST00000641375 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.43
PHGDH-216ENST00000641375 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
PHGDH-216ENST00000641375 KRTAP19-7Q3SYF9 63 aa6.03□□□□□ -1.44
PHGDH-216ENST00000641375 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
PHGDH-216ENST00000641375 MT1EP04732 61 aa5.92□□□□□ -1.46
PHGDH-216ENST00000641375 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
PHGDH-216ENST00000641375 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
PHGDH-216ENST00000641375 MT1LQ93083 61 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms