RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 MT2AP02795 61 aa7.24□□□□□ -1.25
PAX6-268ENST00000640287 COX7CP15954 63 aa7.24□□□□□ -1.25
PAX6-268ENST00000640287 DMAC1Q96GE9 116 aa7.23□□□□□ -1.25
PAX6-268ENST00000640287 KRTAP10-10P60014 251 aa7.21□□□□□ -1.26
PAX6-268ENST00000640287 ANAPC13Q9BS18 74 aa7.21□□□□□ -1.26
PAX6-268ENST00000640287 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.26
PAX6-268ENST00000640287 NDUFC1O43677 76 aa7.2□□□□□ -1.26
PAX6-268ENST00000640287 MT1FP04733 61 aa7.19□□□□□ -1.26
PAX6-268ENST00000640287 ACYP2P14621 99 aa7.15□□□□□ -1.27
PAX6-268ENST00000640287 SPANXA2-OT1Q8N9U9 137 aa7.13□□□□□ -1.27
PAX6-268ENST00000640287 CHKB-CPT1BH3BT56 60 aa7.06□□□□□ -1.28
PAX6-268ENST00000640287 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
PAX6-268ENST00000640287 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
PAX6-268ENST00000640287 CCDC179H3BU77 68 aa7.03□□□□□ -1.28
PAX6-268ENST00000640287 H7BZZ5 65 aa7.03□□□□□ -1.28
PAX6-268ENST00000640287 FSIP2Q5CZC0 6907 aa7.02□□□□□ -1.29
PAX6-268ENST00000640287 SPTSSBQ8NFR3 76 aa7.01□□□□□ -1.29
PAX6-268ENST00000640287 H0YAA0 97 aa6.98□□□□□ -1.29
PAX6-268ENST00000640287 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
PAX6-268ENST00000640287 COA5Q86WW8 74 aa6.93□□□□□ -1.3
PAX6-268ENST00000640287 USH2AO75445 5202 aa6.93□□□□□ -1.3
PAX6-268ENST00000640287 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
PAX6-268ENST00000640287 CRCT1Q9UGL9 99 aa6.88□□□□□ -1.31
PAX6-268ENST00000640287 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
PAX6-268ENST00000640287 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
PAX6-268ENST00000640287 P0C880 135 aa6.84□□□□□ -1.31
PAX6-268ENST00000640287 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.31
PAX6-268ENST00000640287 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
PAX6-268ENST00000640287 SSPOA2VEC9 5147 aa6.81□□□□□ -1.32
PAX6-268ENST00000640287 TMEM258P61165 79 aa6.79□□□□□ -1.32
PAX6-268ENST00000640287 R4GN34 69 aa6.79□□□□□ -1.32
PAX6-268ENST00000640287 M0QZ58 72 aa6.75□□□□□ -1.33
PAX6-268ENST00000640287 Q5VV11 94 aa6.75□□□□□ -1.33
PAX6-268ENST00000640287 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
PAX6-268ENST00000640287 SEC61GP60059 68 aa6.72□□□□□ -1.33
PAX6-268ENST00000640287 SERP1Q9Y6X1 66 aa6.69□□□□□ -1.34
PAX6-268ENST00000640287 H3BS24 57 aa6.68□□□□□ -1.34
PAX6-268ENST00000640287 MT1BP07438 61 aa6.67□□□□□ -1.34
PAX6-268ENST00000640287 LINC01554Q52M75 96 aa6.66□□□□□ -1.34
PAX6-268ENST00000640287 PCP4P48539 62 aa6.64□□□□□ -1.35
PAX6-268ENST00000640287 KRTAP19-6Q3LI70 58 aa6.64□□□□□ -1.35
PAX6-268ENST00000640287 A0A1B0GU69 56 aa6.6□□□□□ -1.35
PAX6-268ENST00000640287 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
PAX6-268ENST00000640287 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
PAX6-268ENST00000640287 A0A1B0GU33 70 aa6.53□□□□□ -1.36
PAX6-268ENST00000640287 A6NN06 94 aa6.53□□□□□ -1.36
PAX6-268ENST00000640287 KRTAP13-4Q3LI77 160 aa6.53□□□□□ -1.36
PAX6-268ENST00000640287 PRR15LQ9BU68 103 aa6.52□□□□□ -1.37
PAX6-268ENST00000640287 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
PAX6-268ENST00000640287 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
PAX6-268ENST00000640287 SPATA8Q6RVD6 105 aa6.47□□□□□ -1.37
PAX6-268ENST00000640287 KRTAP10-5P60370 271 aa6.46□□□□□ -1.38
PAX6-268ENST00000640287 A0A0D9SG42 100 aa6.43□□□□□ -1.38
PAX6-268ENST00000640287 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
PAX6-268ENST00000640287 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
PAX6-268ENST00000640287 MACF1Q9UPN3 7388 aaKnown RBP6.38□□□□□ -1.39
PAX6-268ENST00000640287 MT1XP80297 61 aa6.36□□□□□ -1.39
PAX6-268ENST00000640287 V9GYY9 64 aa6.36□□□□□ -1.39
PAX6-268ENST00000640287 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
PAX6-268ENST00000640287 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
PAX6-268ENST00000640287 Q1T7F1 81 aa6.31□□□□□ -1.4
PAX6-268ENST00000640287 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
PAX6-268ENST00000640287 A8MU10 97 aa6.29□□□□□ -1.4
PAX6-268ENST00000640287 RPS28P62857 69 aaKnown RBP6.29□□□□□ -1.4
PAX6-268ENST00000640287 UQCR11O14957 56 aa6.28□□□□□ -1.4
PAX6-268ENST00000640287 PSPHP1O15172 72 aa6.28□□□□□ -1.4
PAX6-268ENST00000640287 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
PAX6-268ENST00000640287 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
PAX6-268ENST00000640287 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
PAX6-268ENST00000640287 KRTAP9-7A8MTY7 169 aa6.2□□□□□ -1.42
PAX6-268ENST00000640287 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
PAX6-268ENST00000640287 A6NED7 52 aa6.11□□□□□ -1.43
PAX6-268ENST00000640287 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
PAX6-268ENST00000640287 KMT2DO14686 5537 aa6.08□□□□□ -1.44
PAX6-268ENST00000640287 KRTAP6-3Q3LI67 103 aa6.07□□□□□ -1.44
PAX6-268ENST00000640287 K7ERS5 55 aa6.03□□□□□ -1.44
PAX6-268ENST00000640287 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
PAX6-268ENST00000640287 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
PAX6-268ENST00000640287 KRTAP4-8A0A0G2JLE6 195 aa5.98□□□□□ -1.45
PAX6-268ENST00000640287 KRTAP4-8Q9BYQ9 185 aa5.98□□□□□ -1.45
PAX6-268ENST00000640287 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
PAX6-268ENST00000640287 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
PAX6-268ENST00000640287 MUC12Q9UKN1 5478 aa5.9□□□□□ -1.46
PAX6-268ENST00000640287 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
PAX6-268ENST00000640287 TNP1P09430 55 aa5.89□□□□□ -1.47
PAX6-268ENST00000640287 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
PAX6-268ENST00000640287 NEBP20929 6669 aa5.81□□□□□ -1.48
PAX6-268ENST00000640287 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
PAX6-268ENST00000640287 SPRR2EP22531 72 aa5.73□□□□□ -1.49
PAX6-268ENST00000640287 SPRR2BP35325 72 aa5.73□□□□□ -1.49
PAX6-268ENST00000640287 SPRR2AP35326 72 aa5.73□□□□□ -1.49
PAX6-268ENST00000640287 KRTAP25-1Q3LHN0 102 aa5.71□□□□□ -1.49
PAX6-268ENST00000640287 LCE3AQ5TA76 89 aa5.71□□□□□ -1.49
PAX6-268ENST00000640287 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
PAX6-268ENST00000640287 BRK1Q8WUW1 75 aa5.67□□□□□ -1.5
PAX6-268ENST00000640287 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
PAX6-268ENST00000640287 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
PAX6-268ENST00000640287 ROMO1P60602 79 aa5.65□□□□□ -1.5
PAX6-268ENST00000640287 MT1EP04732 61 aa5.62□□□□□ -1.51
PAX6-268ENST00000640287 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms