RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 LINC00208Q96KT6 92 aa7.42□□□□□ -1.22
CNTNAP2-225ENST00000639247 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
CNTNAP2-225ENST00000639247 KRTAP19-2Q3LHN2 52 aa7.4□□□□□ -1.22
CNTNAP2-225ENST00000639247 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.22
CNTNAP2-225ENST00000639247 LCA10Q71F78 164 aa7.38□□□□□ -1.23
CNTNAP2-225ENST00000639247 MP68P56378 58 aa7.37□□□□□ -1.23
CNTNAP2-225ENST00000639247 PRR15LQ9BU68 103 aa7.37□□□□□ -1.23
CNTNAP2-225ENST00000639247 LOC101927531A0A1B0GV80 90 aa7.36□□□□□ -1.23
CNTNAP2-225ENST00000639247 SPANXA2-OT1Q8N9U9 137 aa7.36□□□□□ -1.23
CNTNAP2-225ENST00000639247 CDC42SE1Q9NRR8 79 aa7.36□□□□□ -1.23
CNTNAP2-225ENST00000639247 LCE2CQ5TA81 110 aa7.35□□□□□ -1.23
CNTNAP2-225ENST00000639247 A6NED7 52 aa7.33□□□□□ -1.24
CNTNAP2-225ENST00000639247 COX6B2Q6YFQ2 88 aa7.29□□□□□ -1.24
CNTNAP2-225ENST00000639247 H3BPC8 53 aa7.28□□□□□ -1.24
CNTNAP2-225ENST00000639247 H3BS24 57 aa7.27□□□□□ -1.25
CNTNAP2-225ENST00000639247 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
CNTNAP2-225ENST00000639247 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
CNTNAP2-225ENST00000639247 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
CNTNAP2-225ENST00000639247 MT1HP80294 61 aa7.2□□□□□ -1.26
CNTNAP2-225ENST00000639247 COA5Q86WW8 74 aa7.2□□□□□ -1.26
CNTNAP2-225ENST00000639247 LINC01554Q52M75 96 aa7.15□□□□□ -1.26
CNTNAP2-225ENST00000639247 H1FX-AS1Q4G0G2 97 aa7.14□□□□□ -1.27
CNTNAP2-225ENST00000639247 LCE2AQ5TA79 106 aaPredicted RBP7.13□□□□□ -1.27
CNTNAP2-225ENST00000639247 M0R2T5 61 aa7.09□□□□□ -1.27
CNTNAP2-225ENST00000639247 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
CNTNAP2-225ENST00000639247 DMAC1Q96GE9 116 aa7.05□□□□□ -1.28
CNTNAP2-225ENST00000639247 S4R3F8 94 aa7.03□□□□□ -1.28
CNTNAP2-225ENST00000639247 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
CNTNAP2-225ENST00000639247 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
CNTNAP2-225ENST00000639247 KRTAP10-6P60371 365 aaPredicted RBP6.97□□□□□ -1.29
CNTNAP2-225ENST00000639247 ACYP2P14621 99 aa6.95□□□□□ -1.3
CNTNAP2-225ENST00000639247 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
CNTNAP2-225ENST00000639247 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
CNTNAP2-225ENST00000639247 CSAG1Q6PB30 78 aa6.88□□□□□ -1.31
CNTNAP2-225ENST00000639247 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
CNTNAP2-225ENST00000639247 MT2AP02795 61 aa6.84□□□□□ -1.31
CNTNAP2-225ENST00000639247 MT1FP04733 61 aa6.82□□□□□ -1.32
CNTNAP2-225ENST00000639247 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
CNTNAP2-225ENST00000639247 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
CNTNAP2-225ENST00000639247 A0A1B0GU69 56 aa6.76□□□□□ -1.33
CNTNAP2-225ENST00000639247 UQCR11O14957 56 aa6.75□□□□□ -1.33
CNTNAP2-225ENST00000639247 P0C880 135 aa6.68□□□□□ -1.34
CNTNAP2-225ENST00000639247 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
CNTNAP2-225ENST00000639247 ROMO1P60602 79 aa6.67□□□□□ -1.34
CNTNAP2-225ENST00000639247 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.35
CNTNAP2-225ENST00000639247 H0YAA0 97 aa6.64□□□□□ -1.35
CNTNAP2-225ENST00000639247 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
CNTNAP2-225ENST00000639247 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
CNTNAP2-225ENST00000639247 LCE2BO14633 110 aa6.56□□□□□ -1.36
CNTNAP2-225ENST00000639247 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
CNTNAP2-225ENST00000639247 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
CNTNAP2-225ENST00000639247 USH2AO75445 5202 aa6.53□□□□□ -1.36
CNTNAP2-225ENST00000639247 LCE2DQ5TA82 110 aaPredicted RBP6.52□□□□□ -1.37
CNTNAP2-225ENST00000639247 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
CNTNAP2-225ENST00000639247 M0QZ58 72 aa6.47□□□□□ -1.37
CNTNAP2-225ENST00000639247 R4GN34 69 aa6.47□□□□□ -1.37
CNTNAP2-225ENST00000639247 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.37
CNTNAP2-225ENST00000639247 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
CNTNAP2-225ENST00000639247 A0A1B0GU33 70 aa6.39□□□□□ -1.39
CNTNAP2-225ENST00000639247 MT1BP07438 61 aa6.37□□□□□ -1.39
CNTNAP2-225ENST00000639247 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
CNTNAP2-225ENST00000639247 SSPOA2VEC9 5147 aa6.34□□□□□ -1.39
CNTNAP2-225ENST00000639247 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
CNTNAP2-225ENST00000639247 A0A0D9SG42 100 aa6.31□□□□□ -1.4
CNTNAP2-225ENST00000639247 K7ERS5 55 aa6.24□□□□□ -1.41
CNTNAP2-225ENST00000639247 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
CNTNAP2-225ENST00000639247 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.41
CNTNAP2-225ENST00000639247 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
CNTNAP2-225ENST00000639247 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
CNTNAP2-225ENST00000639247 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
CNTNAP2-225ENST00000639247 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
CNTNAP2-225ENST00000639247 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
CNTNAP2-225ENST00000639247 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
CNTNAP2-225ENST00000639247 FCGBPQ9Y6R7 5405 aaPredicted RBP6.11□□□□□ -1.43
CNTNAP2-225ENST00000639247 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
CNTNAP2-225ENST00000639247 MT1XP80297 61 aa6.09□□□□□ -1.43
CNTNAP2-225ENST00000639247 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
CNTNAP2-225ENST00000639247 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
CNTNAP2-225ENST00000639247 LUZP6Q538Z0 58 aa5.94□□□□□ -1.46
CNTNAP2-225ENST00000639247 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
CNTNAP2-225ENST00000639247 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
CNTNAP2-225ENST00000639247 KMT2DO14686 5537 aa5.88□□□□□ -1.47
CNTNAP2-225ENST00000639247 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
CNTNAP2-225ENST00000639247 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
CNTNAP2-225ENST00000639247 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
CNTNAP2-225ENST00000639247 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
CNTNAP2-225ENST00000639247 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
CNTNAP2-225ENST00000639247 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
CNTNAP2-225ENST00000639247 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
CNTNAP2-225ENST00000639247 TNP1P09430 55 aa5.63□□□□□ -1.51
CNTNAP2-225ENST00000639247 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.52
CNTNAP2-225ENST00000639247 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
CNTNAP2-225ENST00000639247 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
CNTNAP2-225ENST00000639247 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
CNTNAP2-225ENST00000639247 KRTAP6-3Q3LI67 103 aa5.49□□□□□ -1.53
CNTNAP2-225ENST00000639247 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
CNTNAP2-225ENST00000639247 KRTAP5-9P26371 169 aa5.46□□□□□ -1.54
CNTNAP2-225ENST00000639247 KRTAP19-5Q3LI72 72 aa5.44□□□□□ -1.54
CNTNAP2-225ENST00000639247 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
CNTNAP2-225ENST00000639247 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms