RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 KRTAP10-2P60368 255 aa2.66□□□□□ -1.98
RTTN-214ENST00000639128 TGP01266 2768 aa2.65□□□□□ -1.99
RTTN-214ENST00000639128 DNAH10Q8IVF4 4471 aa2.63□□□□□ -1.99
RTTN-214ENST00000639128 DNAH9Q9NYC9 4486 aa2.57□□□□□ -2
RTTN-214ENST00000639128 KRTAP10-10P60014 251 aa2.57□□□□□ -2
RTTN-214ENST00000639128 MEGF8Q7Z7M0 2845 aa2.56□□□□□ -2
RTTN-214ENST00000639128 HECTD4Q9Y4D8 3996 aa2.56□□□□□ -2
RTTN-214ENST00000639128 FBN3Q75N90 2809 aa2.55□□□□□ -2
RTTN-214ENST00000639128 DNAH6Q9C0G6 4158 aa2.53□□□□□ -2
RTTN-214ENST00000639128 PKD1P98161 4303 aa2.53□□□□□ -2
RTTN-214ENST00000639128 HYDINQ4G0P3 5121 aa2.53□□□□□ -2.01
RTTN-214ENST00000639128 KRTAP1-4P0C5Y4 121 aa2.52□□□□□ -2.01
RTTN-214ENST00000639128 DNAH2Q9P225 4427 aa2.52□□□□□ -2.01
RTTN-214ENST00000639128 FAT2Q9NYQ8 4349 aa2.52□□□□□ -2.01
RTTN-214ENST00000639128 LCE2AQ5TA79 106 aaPredicted RBP2.51□□□□□ -2.01
RTTN-214ENST00000639128 KRTAP3-1Q9BYR8 98 aa2.5□□□□□ -2.01
RTTN-214ENST00000639128 LORP23490 312 aaPredicted RBP2.49□□□□□ -2.01
RTTN-214ENST00000639128 KRTAP19-4Q3LI73 84 aa2.49□□□□□ -2.01
RTTN-214ENST00000639128 MT3P25713 68 aa2.49□□□□□ -2.01
RTTN-214ENST00000639128 STARD9Q9P2P6 4700 aa2.48□□□□□ -2.01
RTTN-214ENST00000639128 KMT2AQ03164 3969 aa2.48□□□□□ -2.01
RTTN-214ENST00000639128 KRTAP10-6P60371 365 aaPredicted RBP2.48□□□□□ -2.01
RTTN-214ENST00000639128 RYR3Q15413 4870 aa2.47□□□□□ -2.01
RTTN-214ENST00000639128 HUWE1Q7Z6Z7 4374 aaKnown RBP2.47□□□□□ -2.01
RTTN-214ENST00000639128 A0A1B0GVY2 172 aa2.47□□□□□ -2.01
RTTN-214ENST00000639128 VPS13BQ7Z7G8 4022 aa2.47□□□□□ -2.01
RTTN-214ENST00000639128 DNAH8Q96JB1 4490 aa2.46□□□□□ -2.02
RTTN-214ENST00000639128 VPS13DQ5THJ4 4388 aa2.46□□□□□ -2.02
RTTN-214ENST00000639128 KMT2CQ8NEZ4 4911 aaKnown RBP2.46□□□□□ -2.02
RTTN-214ENST00000639128 DNAH17Q9UFH2 4485 aa2.44□□□□□ -2.02
RTTN-214ENST00000639128 PKHD1P08F94 4074 aa2.43□□□□□ -2.02
RTTN-214ENST00000639128 DNAH11Q96DT5 4516 aa2.43□□□□□ -2.02
RTTN-214ENST00000639128 FAT3Q8TDW7 4589 aa2.43□□□□□ -2.02
RTTN-214ENST00000639128 PLECQ15149 4684 aaKnown RBP2.42□□□□□ -2.02
RTTN-214ENST00000639128 SACSQ9NZJ4 4579 aa2.41□□□□□ -2.02
RTTN-214ENST00000639128 PKHD1L1Q86WI1 4243 aa2.41□□□□□ -2.02
RTTN-214ENST00000639128 KRTAP12-3P60328 96 aa2.4□□□□□ -2.02
RTTN-214ENST00000639128 KRTAP10-12P60413 245 aa2.4□□□□□ -2.03
RTTN-214ENST00000639128 RYR2Q92736 4967 aa2.37□□□□□ -2.03
RTTN-214ENST00000639128 DNAH5Q8TE73 4624 aa2.35□□□□□ -2.03
RTTN-214ENST00000639128 KRTAP10-5P60370 271 aa2.34□□□□□ -2.04
RTTN-214ENST00000639128 LRP1BQ9NZR2 4599 aa2.33□□□□□ -2.04
RTTN-214ENST00000639128 EPPK1P58107 5090 aaKnown RBP2.3□□□□□ -2.04
RTTN-214ENST00000639128 LOC100996750A0A140TA64 210 aa2.3□□□□□ -2.04
RTTN-214ENST00000639128 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
RTTN-214ENST00000639128 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
RTTN-214ENST00000639128 MYCBP2O75592 4640 aa2.23□□□□□ -2.05
RTTN-214ENST00000639128 CRCT1Q9UGL9 99 aa2.22□□□□□ -2.05
RTTN-214ENST00000639128 FAT1Q14517 4588 aa2.22□□□□□ -2.05
RTTN-214ENST00000639128 APOBP04114 4563 aaKnown RBP2.21□□□□□ -2.06
RTTN-214ENST00000639128 HSPG2P98160 4391 aa2.2□□□□□ -2.06
RTTN-214ENST00000639128 TNXBP22105 4242 aa2.19□□□□□ -2.06
RTTN-214ENST00000639128 DYNC1H1Q14204 4646 aaKnown RBP2.19□□□□□ -2.06
RTTN-214ENST00000639128 PCLOQ9Y6V0 5065 aa2.18□□□□□ -2.06
RTTN-214ENST00000639128 ABCA13Q86UQ4 5058 aa2.18□□□□□ -2.06
RTTN-214ENST00000639128 KRTAP10-7P60409 375 aaPredicted RBP2.17□□□□□ -2.06
RTTN-214ENST00000639128 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
RTTN-214ENST00000639128 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
RTTN-214ENST00000639128 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
RTTN-214ENST00000639128 LPAP08519 4548 aa2.09□□□□□ -2.07
RTTN-214ENST00000639128 KRTAP8-1Q8IUC2 63 aa2.08□□□□□ -2.08
RTTN-214ENST00000639128 RYR1P21817 5038 aa2.07□□□□□ -2.08
RTTN-214ENST00000639128 HERC2O95714 4834 aa2.07□□□□□ -2.08
RTTN-214ENST00000639128 LRP2P98164 4655 aa2.06□□□□□ -2.08
RTTN-214ENST00000639128 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
RTTN-214ENST00000639128 KRTAP4-8Q9BYQ9 185 aa2.05□□□□□ -2.08
RTTN-214ENST00000639128 LCE3CQ5T5A8 94 aa2.05□□□□□ -2.08
RTTN-214ENST00000639128 BIRC6Q9NR09 4857 aa2.04□□□□□ -2.08
RTTN-214ENST00000639128 LCE3BQ5TA77 95 aa2.02□□□□□ -2.09
RTTN-214ENST00000639128 KRTAP17-1Q9BYP8 105 aa2.02□□□□□ -2.09
RTTN-214ENST00000639128 HERC1Q15751 4861 aa2□□□□□ -2.09
RTTN-214ENST00000639128 FLGP20930 4061 aaPredicted RBP2□□□□□ -2.09
RTTN-214ENST00000639128 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
RTTN-214ENST00000639128 KRTAP9-6A0A140TA67 174 aa1.98□□□□□ -2.09
RTTN-214ENST00000639128 KRTAP9-2Q9BYQ4 174 aa1.98□□□□□ -2.09
RTTN-214ENST00000639128 KIAA1109Q2LD37 5005 aa1.97□□□□□ -2.09
RTTN-214ENST00000639128 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
RTTN-214ENST00000639128 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.96□□□□□ -2.1
RTTN-214ENST00000639128 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
RTTN-214ENST00000639128 MT1HL1P0DM35 61 aa1.94□□□□□ -2.1
RTTN-214ENST00000639128 HMCN2Q8NDA2 5059 aa1.94□□□□□ -2.1
RTTN-214ENST00000639128 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
RTTN-214ENST00000639128 MUC2Q02817 5179 aa1.93□□□□□ -2.1
RTTN-214ENST00000639128 KRTAP4-8A0A0G2JLE6 195 aa1.93□□□□□ -2.1
RTTN-214ENST00000639128 SPRR2GQ9BYE4 73 aa1.92□□□□□ -2.1
RTTN-214ENST00000639128 OBSCNQ5VST9 7968 aa1.92□□□□□ -2.1
RTTN-214ENST00000639128 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.11
RTTN-214ENST00000639128 KRTAP9-7A8MTY7 169 aa1.9□□□□□ -2.11
RTTN-214ENST00000639128 KRTAP9-8Q9BYQ0 159 aa1.9□□□□□ -2.11
RTTN-214ENST00000639128 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
RTTN-214ENST00000639128 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
RTTN-214ENST00000639128 KRTAP4-7Q9BYR0 210 aa1.88□□□□□ -2.11
RTTN-214ENST00000639128 LCE1DQ5T752 114 aa1.87□□□□□ -2.11
RTTN-214ENST00000639128 KRTAP9-9Q9BYP9 154 aa1.87□□□□□ -2.11
RTTN-214ENST00000639128 KRTAP9-4Q9BYQ2 154 aa1.87□□□□□ -2.11
RTTN-214ENST00000639128 KRTAP5-3Q6L8H2 238 aa1.86□□□□□ -2.11
RTTN-214ENST00000639128 UBR4Q5T4S7 5183 aa1.86□□□□□ -2.11
RTTN-214ENST00000639128 KRTAP4-5Q9BYR2 181 aa1.84□□□□□ -2.12
RTTN-214ENST00000639128 RNF213Q63HN8 5207 aa1.81□□□□□ -2.12
RTTN-214ENST00000639128 KRTAP4-9Q9BYQ8 210 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms