RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 MYT1Q01538 1121 aa9.59□□□□□ -0.87
RTTN-214ENST00000639128 PELP1Q8IZL8 1130 aaKnown RBP9.32□□□□□ -0.92
RTTN-214ENST00000639128 TTBK1Q5TCY1 1321 aaPredicted RBP8.93□□□□□ -0.98
RTTN-214ENST00000639128 CCER1Q8TC90 406 aaPredicted RBP8.81□□□□□ -1
RTTN-214ENST00000639128 YTHDC1Q96MU7 727 aaKnown RBP8.77□□□□□ -1.01
RTTN-214ENST00000639128 ERICH6Q7L0X2 663 aa8.73□□□□□ -1.01
RTTN-214ENST00000639128 CENPBP07199 599 aaPredicted RBP8.52□□□□□ -1.05
RTTN-214ENST00000639128 RANGAP1P46060 587 aaPredicted RBP8.39□□□□□ -1.07
RTTN-214ENST00000639128 GLIPR1L2Q4G1C9 344 aa8.29□□□□□ -1.08
RTTN-214ENST00000639128 NEFLP07196 543 aa8.23□□□□□ -1.09
RTTN-214ENST00000639128 ZEB1P37275 1124 aaPredicted RBP8.22□□□□□ -1.09
RTTN-214ENST00000639128 CHIC1Q5VXU3 224 aa8.15□□□□□ -1.1
RTTN-214ENST00000639128 RTL5Q5HYW3 569 aaPredicted RBP8.14□□□□□ -1.11
RTTN-214ENST00000639128 DAXXQ9UER7 740 aaPredicted RBP8.13□□□□□ -1.11
RTTN-214ENST00000639128 EHMT2Q96KQ7 1210 aa8.11□□□□□ -1.11
RTTN-214ENST00000639128 MYT1LQ9UL68 1186 aa8.04□□□□□ -1.12
RTTN-214ENST00000639128 CLSPNQ9HAW4 1339 aa8.01□□□□□ -1.13
RTTN-214ENST00000639128 SLC24A1O60721 1099 aa7.91□□□□□ -1.14
RTTN-214ENST00000639128 POLR3GLQ9BT43 218 aa7.91□□□□□ -1.14
RTTN-214ENST00000639128 ZNF316A6NFI3 1004 aaPredicted RBP7.86□□□□□ -1.15
RTTN-214ENST00000639128 DCAF8L2P0C7V8 631 aa7.86□□□□□ -1.15
RTTN-214ENST00000639128 EIF5BO60841 1220 aaKnown RBP7.85□□□□□ -1.15
RTTN-214ENST00000639128 TNNT2P45379 298 aaPredicted RBP7.82□□□□□ -1.16
RTTN-214ENST00000639128 APLP2Q06481 763 aa7.8□□□□□ -1.16
RTTN-214ENST00000639128 NCLP19338 710 aaKnown RBP7.8□□□□□ -1.16
RTTN-214ENST00000639128 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
RTTN-214ENST00000639128 AEBP2Q6ZN18 517 aaPredicted RBP7.73□□□□□ -1.17
RTTN-214ENST00000639128 TRIM44Q96DX7 344 aaPredicted RBP7.73□□□□□ -1.17
RTTN-214ENST00000639128 ANP32BQ92688 251 aaKnown RBP7.71□□□□□ -1.17
RTTN-214ENST00000639128 CDK11BP21127 795 aaKnown RBP7.7□□□□□ -1.18
RTTN-214ENST00000639128 NISCHQ9Y2I1 1504 aa7.69□□□□□ -1.18
RTTN-214ENST00000639128 PCGF6Q9BYE7 350 aa7.68□□□□□ -1.18
RTTN-214ENST00000639128 ZNF326Q5BKZ1 582 aaKnown RBP7.63□□□□□ -1.19
RTTN-214ENST00000639128 CDK11AQ9UQ88 783 aaPredicted RBP7.62□□□□□ -1.19
RTTN-214ENST00000639128 PTMSP20962 102 aa7.61□□□□□ -1.19
RTTN-214ENST00000639128 HRCP23327 699 aa7.59□□□□□ -1.19
RTTN-214ENST00000639128 ANP32AP39687 249 aaKnown RBP7.58□□□□□ -1.2
RTTN-214ENST00000639128 PPARGC1BQ86YN6 1023 aaKnown RBP7.55□□□□□ -1.2
RTTN-214ENST00000639128 ERICH6BQ5W0A0 696 aa7.53□□□□□ -1.2
RTTN-214ENST00000639128 ANP32EQ9BTT0 268 aa7.53□□□□□ -1.2
RTTN-214ENST00000639128 CALRP27797 417 aaKnown RBP7.51□□□□□ -1.21
RTTN-214ENST00000639128 SUPT5HO00267 1087 aaKnown RBP7.47□□□□□ -1.21
RTTN-214ENST00000639128 GTF3C3Q9Y5Q9 886 aa7.45□□□□□ -1.22
RTTN-214ENST00000639128 NEFMP07197 916 aa7.42□□□□□ -1.22
RTTN-214ENST00000639128 BCL11AQ9H165 835 aa7.42□□□□□ -1.22
RTTN-214ENST00000639128 TRIM26Q12899 539 aaPredicted RBP7.4□□□□□ -1.23
RTTN-214ENST00000639128 ZBTB47Q9UFB7 747 aaPredicted RBP7.39□□□□□ -1.23
RTTN-214ENST00000639128 HMGB1P09429 215 aaKnown RBP7.39□□□□□ -1.23
RTTN-214ENST00000639128 SHROOM4Q9ULL8 1493 aa7.38□□□□□ -1.23
RTTN-214ENST00000639128 ACIN1Q9UKV3 1341 aaKnown RBP7.37□□□□□ -1.23
RTTN-214ENST00000639128 DIEXFQ68CQ4 756 aaKnown RBP7.36□□□□□ -1.23
RTTN-214ENST00000639128 ATP1B4Q9UN42 357 aaPredicted RBP7.36□□□□□ -1.23
RTTN-214ENST00000639128 TNNT3P45378 269 aaPredicted RBP7.35□□□□□ -1.23
RTTN-214ENST00000639128 UPF2Q9HAU5 1272 aaKnown RBP7.34□□□□□ -1.23
RTTN-214ENST00000639128 CNGB1Q14028 1251 aaPredicted RBP7.33□□□□□ -1.24
RTTN-214ENST00000639128 LAS1LQ9Y4W2 734 aaKnown RBP7.31□□□□□ -1.24
RTTN-214ENST00000639128 GOLGA6L22H0YM25 854 aa7.31□□□□□ -1.24
RTTN-214ENST00000639128 NAP1L5Q96NT1 182 aaPredicted RBP7.31□□□□□ -1.24
RTTN-214ENST00000639128 A0A0U1RQG5 324 aaPredicted RBP7.3□□□□□ -1.24
RTTN-214ENST00000639128 PODXL2Q9NZ53 605 aa7.29□□□□□ -1.24
RTTN-214ENST00000639128 ARID4BQ4LE39 1312 aaPredicted RBP7.29□□□□□ -1.24
RTTN-214ENST00000639128 PPM1GO15355 546 aaPredicted RBP7.28□□□□□ -1.24
RTTN-214ENST00000639128 HSP90AA1P07900 732 aaKnown RBP7.28□□□□□ -1.24
RTTN-214ENST00000639128 PNNQ9H307 717 aaKnown RBP7.28□□□□□ -1.24
RTTN-214ENST00000639128 APPP05067 770 aa7.28□□□□□ -1.24
RTTN-214ENST00000639128 DDRGK1Q96HY6 314 aa7.27□□□□□ -1.25
RTTN-214ENST00000639128 SCAF1Q9H7N4 1312 aaKnown RBP7.25□□□□□ -1.25
RTTN-214ENST00000639128 CHAF1AQ13111 956 aaPredicted RBP7.23□□□□□ -1.25
RTTN-214ENST00000639128 USP35Q9P2H5 1018 aa7.23□□□□□ -1.25
RTTN-214ENST00000639128 STK11IPQ8N1F8 1099 aa7.22□□□□□ -1.25
RTTN-214ENST00000639128 NRDCO43847 1150 aa7.21□□□□□ -1.25
RTTN-214ENST00000639128 DNTTIP2Q5QJE6 756 aaKnown RBP7.21□□□□□ -1.25
RTTN-214ENST00000639128 L1TD1Q5T7N2 865 aaKnown RBP7.21□□□□□ -1.25
RTTN-214ENST00000639128 BCANQ96GW7 911 aa7.21□□□□□ -1.25
RTTN-214ENST00000639128 GOLGA6L6A8MZA4 724 aa7.21□□□□□ -1.26
RTTN-214ENST00000639128 HOMEZQ8IX15 550 aa7.21□□□□□ -1.26
RTTN-214ENST00000639128 SETQ01105 290 aaPredicted RBP7.2□□□□□ -1.26
RTTN-214ENST00000639128 RSPH6AQ9H0K4 717 aa7.2□□□□□ -1.26
RTTN-214ENST00000639128 NBR1Q14596 966 aa7.2□□□□□ -1.26
RTTN-214ENST00000639128 BECN1Q14457 450 aa7.19□□□□□ -1.26
RTTN-214ENST00000639128 ANP32CO43423 234 aa7.19□□□□□ -1.26
RTTN-214ENST00000639128 PTMAP06454 111 aaKnown RBP7.18□□□□□ -1.26
RTTN-214ENST00000639128 GOLGA6L3A6NEY3 463 aa7.17□□□□□ -1.26
RTTN-214ENST00000639128 NEFHP12036 1026 aa7.17□□□□□ -1.26
RTTN-214ENST00000639128 PLPPR3Q6T4P5 718 aa7.17□□□□□ -1.26
RTTN-214ENST00000639128 NPM2Q86SE8 214 aaKnown RBP7.17□□□□□ -1.26
RTTN-214ENST00000639128 PKNOX2Q96KN3 472 aa7.17□□□□□ -1.26
RTTN-214ENST00000639128 HSP90AA2PQ14568 343 aaPredicted RBP7.15□□□□□ -1.26
RTTN-214ENST00000639128 GOLGA6L1Q8N7Z2 621 aa7.15□□□□□ -1.27
RTTN-214ENST00000639128 LOC105371045A0A1W2PR82 267 aa7.14□□□□□ -1.27
RTTN-214ENST00000639128 VSIG10Q8N0Z9 540 aa7.14□□□□□ -1.27
RTTN-214ENST00000639128 AMER1Q5JTC6 1135 aaPredicted RBP7.13□□□□□ -1.27
RTTN-214ENST00000639128 MSNP26038 577 aaKnown RBP7.13□□□□□ -1.27
RTTN-214ENST00000639128 CANXP27824 592 aaKnown RBP7.13□□□□□ -1.27
RTTN-214ENST00000639128 PHF23Q9BUL5 403 aaPredicted RBP7.13□□□□□ -1.27
RTTN-214ENST00000639128 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
RTTN-214ENST00000639128 MYO15BQ96JP2 1530 aa7.11□□□□□ -1.27
RTTN-214ENST00000639128 PRKCSHP14314 528 aaPredicted RBP7.1□□□□□ -1.27
RTTN-214ENST00000639128 C14orf37Q86TY3 774 aa7.1□□□□□ -1.27
RTTN-214ENST00000639128 DCAF1Q9Y4B6 1507 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms