RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 A0A1B0GU33 70 aa5.42□□□□□ -1.54
PAX6-244ENST00000638913 RYR1P21817 5038 aa5.41□□□□□ -1.54
PAX6-244ENST00000638913 KIAA1109Q2LD37 5005 aa5.41□□□□□ -1.54
PAX6-244ENST00000638913 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
PAX6-244ENST00000638913 KRTAP17-1Q9BYP8 105 aa5.41□□□□□ -1.54
PAX6-244ENST00000638913 EPPK1P58107 5090 aaKnown RBP5.4□□□□□ -1.55
PAX6-244ENST00000638913 DMBT1Q9UGM3 2413 aaPredicted RBP5.38□□□□□ -1.55
PAX6-244ENST00000638913 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
PAX6-244ENST00000638913 COX6B2Q6YFQ2 88 aa5.38□□□□□ -1.55
PAX6-244ENST00000638913 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
PAX6-244ENST00000638913 Q5VSD8 79 aa5.33□□□□□ -1.56
PAX6-244ENST00000638913 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
PAX6-244ENST00000638913 CRIPTQ9P021 101 aa5.31□□□□□ -1.56
PAX6-244ENST00000638913 LPAP08519 4548 aa5.31□□□□□ -1.56
PAX6-244ENST00000638913 XP32Q5T750 250 aa5.28□□□□□ -1.56
PAX6-244ENST00000638913 H3BS24 57 aa5.28□□□□□ -1.56
PAX6-244ENST00000638913 RPL37P61927 97 aaKnown RBP5.27□□□□□ -1.57
PAX6-244ENST00000638913 A0A0D9SG42 100 aa5.27□□□□□ -1.57
PAX6-244ENST00000638913 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
PAX6-244ENST00000638913 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
PAX6-244ENST00000638913 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
PAX6-244ENST00000638913 S4R3F8 94 aa5.22□□□□□ -1.57
PAX6-244ENST00000638913 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
PAX6-244ENST00000638913 K7ERS5 55 aa5.2□□□□□ -1.58
PAX6-244ENST00000638913 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
PAX6-244ENST00000638913 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
PAX6-244ENST00000638913 LRP2P98164 4655 aa5.19□□□□□ -1.58
PAX6-244ENST00000638913 P0C880 135 aa5.19□□□□□ -1.58
PAX6-244ENST00000638913 MT1HL1P0DM35 61 aa5.16□□□□□ -1.58
PAX6-244ENST00000638913 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.58
PAX6-244ENST00000638913 ABCA13Q86UQ4 5058 aa5.13□□□□□ -1.59
PAX6-244ENST00000638913 ROMO1P60602 79 aa5.11□□□□□ -1.59
PAX6-244ENST00000638913 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
PAX6-244ENST00000638913 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
PAX6-244ENST00000638913 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
PAX6-244ENST00000638913 HERC2O95714 4834 aa5.04□□□□□ -1.6
PAX6-244ENST00000638913 TPRXLQ17RH7 258 aa5.04□□□□□ -1.6
PAX6-244ENST00000638913 BIRC6Q9NR09 4857 aa5.02□□□□□ -1.61
PAX6-244ENST00000638913 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
PAX6-244ENST00000638913 LCE2BO14633 110 aa4.92□□□□□ -1.62
PAX6-244ENST00000638913 M0QZ58 72 aa4.91□□□□□ -1.62
PAX6-244ENST00000638913 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
PAX6-244ENST00000638913 PCLOQ9Y6V0 5065 aa4.91□□□□□ -1.62
PAX6-244ENST00000638913 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
PAX6-244ENST00000638913 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
PAX6-244ENST00000638913 R4GN34 69 aa4.87□□□□□ -1.63
PAX6-244ENST00000638913 MUC2Q02817 5179 aa4.87□□□□□ -1.63
PAX6-244ENST00000638913 HERC1Q15751 4861 aa4.85□□□□□ -1.63
PAX6-244ENST00000638913 SEC61BP60468 96 aaKnown RBP4.83□□□□□ -1.64
PAX6-244ENST00000638913 HMCN2Q8NDA2 5059 aa4.76□□□□□ -1.65
PAX6-244ENST00000638913 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
PAX6-244ENST00000638913 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
PAX6-244ENST00000638913 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
PAX6-244ENST00000638913 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
PAX6-244ENST00000638913 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
PAX6-244ENST00000638913 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
PAX6-244ENST00000638913 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
PAX6-244ENST00000638913 FAT4Q6V0I7 4981 aa4.6□□□□□ -1.67
PAX6-244ENST00000638913 UBR4Q5T4S7 5183 aa4.59□□□□□ -1.67
PAX6-244ENST00000638913 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
PAX6-244ENST00000638913 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
PAX6-244ENST00000638913 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.5□□□□□ -1.69
PAX6-244ENST00000638913 LCE2CQ5TA81 110 aa4.49□□□□□ -1.69
PAX6-244ENST00000638913 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
PAX6-244ENST00000638913 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
PAX6-244ENST00000638913 M0R2T5 61 aa4.43□□□□□ -1.7
PAX6-244ENST00000638913 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
PAX6-244ENST00000638913 TNP1P09430 55 aa4.42□□□□□ -1.7
PAX6-244ENST00000638913 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
PAX6-244ENST00000638913 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
PAX6-244ENST00000638913 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
PAX6-244ENST00000638913 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
PAX6-244ENST00000638913 MT1HP80294 61 aa4.33□□□□□ -1.72
PAX6-244ENST00000638913 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
PAX6-244ENST00000638913 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
PAX6-244ENST00000638913 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
PAX6-244ENST00000638913 MT1FP04733 61 aa4.29□□□□□ -1.72
PAX6-244ENST00000638913 MT2AP02795 61 aa4.26□□□□□ -1.73
PAX6-244ENST00000638913 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
PAX6-244ENST00000638913 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
PAX6-244ENST00000638913 LCE3AQ5TA76 89 aa4.24□□□□□ -1.73
PAX6-244ENST00000638913 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
PAX6-244ENST00000638913 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
PAX6-244ENST00000638913 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
PAX6-244ENST00000638913 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
PAX6-244ENST00000638913 MT1BP07438 61 aa4.12□□□□□ -1.75
PAX6-244ENST00000638913 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
PAX6-244ENST00000638913 MT1XP80297 61 aa4.11□□□□□ -1.75
PAX6-244ENST00000638913 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
PAX6-244ENST00000638913 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
PAX6-244ENST00000638913 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
PAX6-244ENST00000638913 USH2AO75445 5202 aa4.04□□□□□ -1.76
PAX6-244ENST00000638913 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
PAX6-244ENST00000638913 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
PAX6-244ENST00000638913 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
PAX6-244ENST00000638913 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
PAX6-244ENST00000638913 KMT2DO14686 5537 aa4□□□□□ -1.77
PAX6-244ENST00000638913 KRTAP12-3P60328 96 aa4□□□□□ -1.77
PAX6-244ENST00000638913 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
PAX6-244ENST00000638913 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms