RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 LINC00304Q8N9R0 145 aa4.19□□□□□ -1.74
NECAP1-213ENST00000638883 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
NECAP1-213ENST00000638883 BIRC6Q9NR09 4857 aa4.18□□□□□ -1.74
NECAP1-213ENST00000638883 RYR1P21817 5038 aa4.18□□□□□ -1.74
NECAP1-213ENST00000638883 LRP1Q07954 4544 aaKnown RBP4.18□□□□□ -1.74
NECAP1-213ENST00000638883 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
NECAP1-213ENST00000638883 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
NECAP1-213ENST00000638883 A0A1B0GU33 70 aa4.17□□□□□ -1.74
NECAP1-213ENST00000638883 Q96NJ1 140 aa4.16□□□□□ -1.74
NECAP1-213ENST00000638883 ANAPC11Q9NYG5 84 aa4.15□□□□□ -1.74
NECAP1-213ENST00000638883 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
NECAP1-213ENST00000638883 TGP01266 2768 aa4.14□□□□□ -1.75
NECAP1-213ENST00000638883 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
NECAP1-213ENST00000638883 Q8N1X5 172 aa4.14□□□□□ -1.75
NECAP1-213ENST00000638883 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
NECAP1-213ENST00000638883 PSORS1C2Q9UIG4 136 aa4.12□□□□□ -1.75
NECAP1-213ENST00000638883 KRTAP11-1Q8IUC1 163 aa4.12□□□□□ -1.75
NECAP1-213ENST00000638883 XP32Q5T750 250 aa4.12□□□□□ -1.75
NECAP1-213ENST00000638883 PANO1I0J062 215 aa4.11□□□□□ -1.75
NECAP1-213ENST00000638883 KRTAP1-5Q9BYS1 174 aa4.1□□□□□ -1.75
NECAP1-213ENST00000638883 Q6ZSA8 131 aa4.09□□□□□ -1.75
NECAP1-213ENST00000638883 H0YAA0 97 aa4.09□□□□□ -1.76
NECAP1-213ENST00000638883 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.76
NECAP1-213ENST00000638883 APLNQ9ULZ1 77 aa4.08□□□□□ -1.76
NECAP1-213ENST00000638883 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
NECAP1-213ENST00000638883 HERC2O95714 4834 aa4.07□□□□□ -1.76
NECAP1-213ENST00000638883 H1FX-AS1Q4G0G2 97 aa4.06□□□□□ -1.76
NECAP1-213ENST00000638883 A0A0D9SG42 100 aa4.04□□□□□ -1.76
NECAP1-213ENST00000638883 KRTAP13-3Q3SY46 172 aa4.04□□□□□ -1.76
NECAP1-213ENST00000638883 A0A087WTM6 91 aa4.03□□□□□ -1.76
NECAP1-213ENST00000638883 KRTAP17-1Q9BYP8 105 aa4.03□□□□□ -1.76
NECAP1-213ENST00000638883 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
NECAP1-213ENST00000638883 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
NECAP1-213ENST00000638883 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
NECAP1-213ENST00000638883 PCLOQ9Y6V0 5065 aa4.02□□□□□ -1.77
NECAP1-213ENST00000638883 SPACA4Q8TDM5 124 aa4.02□□□□□ -1.77
NECAP1-213ENST00000638883 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
NECAP1-213ENST00000638883 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
NECAP1-213ENST00000638883 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
NECAP1-213ENST00000638883 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
NECAP1-213ENST00000638883 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
NECAP1-213ENST00000638883 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
NECAP1-213ENST00000638883 KRTAP13-1Q8IUC0 172 aa3.96□□□□□ -1.78
NECAP1-213ENST00000638883 Q5VSD8 79 aa3.96□□□□□ -1.78
NECAP1-213ENST00000638883 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
NECAP1-213ENST00000638883 COX6B2Q6YFQ2 88 aa3.93□□□□□ -1.78
NECAP1-213ENST00000638883 Q6ZRN7 208 aaPredicted RBP3.93□□□□□ -1.78
NECAP1-213ENST00000638883 KRTAP10-1P60331 282 aa3.86□□□□□ -1.79
NECAP1-213ENST00000638883 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
NECAP1-213ENST00000638883 KRTAP10-4P60372 401 aaPredicted RBP3.83□□□□□ -1.8
NECAP1-213ENST00000638883 C9orf92A6NGG3 77 aa3.82□□□□□ -1.8
NECAP1-213ENST00000638883 KIAA1109Q2LD37 5005 aa3.81□□□□□ -1.8
NECAP1-213ENST00000638883 M0R2T5 61 aa3.81□□□□□ -1.8
NECAP1-213ENST00000638883 LRP2P98164 4655 aa3.79□□□□□ -1.8
NECAP1-213ENST00000638883 S4R3F8 94 aa3.78□□□□□ -1.8
NECAP1-213ENST00000638883 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
NECAP1-213ENST00000638883 HERC1Q15751 4861 aa3.74□□□□□ -1.81
NECAP1-213ENST00000638883 KRTAP13-2Q52LG2 175 aa3.74□□□□□ -1.81
NECAP1-213ENST00000638883 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
NECAP1-213ENST00000638883 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
NECAP1-213ENST00000638883 MUC2Q02817 5179 aa3.67□□□□□ -1.82
NECAP1-213ENST00000638883 A0A1B0GVY2 172 aa3.67□□□□□ -1.82
NECAP1-213ENST00000638883 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
NECAP1-213ENST00000638883 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
NECAP1-213ENST00000638883 KRTAP10-6P60371 365 aaPredicted RBP3.64□□□□□ -1.83
NECAP1-213ENST00000638883 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
NECAP1-213ENST00000638883 KRTAP10-8P60410 259 aa3.62□□□□□ -1.83
NECAP1-213ENST00000638883 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
NECAP1-213ENST00000638883 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
NECAP1-213ENST00000638883 M0QZ58 72 aa3.56□□□□□ -1.84
NECAP1-213ENST00000638883 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
NECAP1-213ENST00000638883 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
NECAP1-213ENST00000638883 R4GN34 69 aa3.53□□□□□ -1.84
NECAP1-213ENST00000638883 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
NECAP1-213ENST00000638883 RPS29P62273 56 aaKnown RBP3.49□□□□□ -1.85
NECAP1-213ENST00000638883 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
NECAP1-213ENST00000638883 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
NECAP1-213ENST00000638883 PRO2289Q9P1D8 64 aa3.45□□□□□ -1.86
NECAP1-213ENST00000638883 KRTAP4-5Q9BYR2 181 aa3.44□□□□□ -1.86
NECAP1-213ENST00000638883 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
NECAP1-213ENST00000638883 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
NECAP1-213ENST00000638883 RNF213Q63HN8 5207 aa3.4□□□□□ -1.86
NECAP1-213ENST00000638883 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
NECAP1-213ENST00000638883 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
NECAP1-213ENST00000638883 MT1HL1P0DM35 61 aa3.33□□□□□ -1.88
NECAP1-213ENST00000638883 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
NECAP1-213ENST00000638883 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
NECAP1-213ENST00000638883 INE1O15225 51 aa3.31□□□□□ -1.88
NECAP1-213ENST00000638883 TNP1P09430 55 aa3.3□□□□□ -1.88
NECAP1-213ENST00000638883 KRTAP10-10P60014 251 aa3.24□□□□□ -1.89
NECAP1-213ENST00000638883 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
NECAP1-213ENST00000638883 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.91
NECAP1-213ENST00000638883 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
NECAP1-213ENST00000638883 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
NECAP1-213ENST00000638883 SSPOA2VEC9 5147 aa3.1□□□□□ -1.91
NECAP1-213ENST00000638883 USH2AO75445 5202 aa3.05□□□□□ -1.92
NECAP1-213ENST00000638883 LCE3AQ5TA76 89 aa2.93□□□□□ -1.94
NECAP1-213ENST00000638883 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
NECAP1-213ENST00000638883 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
NECAP1-213ENST00000638883 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms