RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 LPAP08519 4548 aa5.57□□□□□ -1.52
PAX6-236ENST00000638685 LRP2P98164 4655 aa5.55□□□□□ -1.52
PAX6-236ENST00000638685 A6NN06 94 aa5.55□□□□□ -1.52
PAX6-236ENST00000638685 UQCR11O14957 56 aa5.54□□□□□ -1.52
PAX6-236ENST00000638685 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
PAX6-236ENST00000638685 SEC61GP60059 68 aa5.52□□□□□ -1.53
PAX6-236ENST00000638685 SPATA8Q6RVD6 105 aa5.52□□□□□ -1.53
PAX6-236ENST00000638685 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
PAX6-236ENST00000638685 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
PAX6-236ENST00000638685 KRTAP3-1Q9BYR8 98 aa5.44□□□□□ -1.54
PAX6-236ENST00000638685 XP32Q5T750 250 aa5.43□□□□□ -1.54
PAX6-236ENST00000638685 COX6B2Q6YFQ2 88 aa5.42□□□□□ -1.54
PAX6-236ENST00000638685 HERC1Q15751 4861 aa5.4□□□□□ -1.54
PAX6-236ENST00000638685 RPL37P61927 97 aaKnown RBP5.38□□□□□ -1.55
PAX6-236ENST00000638685 LCE2BO14633 110 aa5.35□□□□□ -1.55
PAX6-236ENST00000638685 A0A1B0GU33 70 aa5.34□□□□□ -1.55
PAX6-236ENST00000638685 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
PAX6-236ENST00000638685 H1FX-AS1Q4G0G2 97 aa5.31□□□□□ -1.56
PAX6-236ENST00000638685 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
PAX6-236ENST00000638685 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
PAX6-236ENST00000638685 H0YAA0 97 aa5.3□□□□□ -1.56
PAX6-236ENST00000638685 MUC2Q02817 5179 aa5.29□□□□□ -1.56
PAX6-236ENST00000638685 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
PAX6-236ENST00000638685 S4R3F8 94 aa5.23□□□□□ -1.57
PAX6-236ENST00000638685 PRAC1Q96KF2 57 aa5.22□□□□□ -1.57
PAX6-236ENST00000638685 K7ERS5 55 aa5.21□□□□□ -1.57
PAX6-236ENST00000638685 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.57
PAX6-236ENST00000638685 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
PAX6-236ENST00000638685 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
PAX6-236ENST00000638685 LCE2CQ5TA81 110 aa5.15□□□□□ -1.59
PAX6-236ENST00000638685 CSAG1Q6PB30 78 aa5.13□□□□□ -1.59
PAX6-236ENST00000638685 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
PAX6-236ENST00000638685 UBR4Q5T4S7 5183 aa5.11□□□□□ -1.59
PAX6-236ENST00000638685 LINC01554Q52M75 96 aa5.11□□□□□ -1.59
PAX6-236ENST00000638685 SEC61BP60468 96 aaKnown RBP5.08□□□□□ -1.6
PAX6-236ENST00000638685 KRTAP13-4Q3LI77 160 aa5.06□□□□□ -1.6
PAX6-236ENST00000638685 P0C880 135 aa5.06□□□□□ -1.6
PAX6-236ENST00000638685 LCE2AQ5TA79 106 aaPredicted RBP5.06□□□□□ -1.6
PAX6-236ENST00000638685 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
PAX6-236ENST00000638685 FLGP20930 4061 aaPredicted RBP5.04□□□□□ -1.6
PAX6-236ENST00000638685 A0A0D9SG42 100 aa5.04□□□□□ -1.6
PAX6-236ENST00000638685 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
PAX6-236ENST00000638685 ROMO1P60602 79 aa5.02□□□□□ -1.61
PAX6-236ENST00000638685 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
PAX6-236ENST00000638685 M0QZ58 72 aa5□□□□□ -1.61
PAX6-236ENST00000638685 LORP23490 312 aaPredicted RBP4.99□□□□□ -1.61
PAX6-236ENST00000638685 H3BS24 57 aa4.91□□□□□ -1.62
PAX6-236ENST00000638685 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
PAX6-236ENST00000638685 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
PAX6-236ENST00000638685 A0A0A0MQY5 61 aa4.9□□□□□ -1.62
PAX6-236ENST00000638685 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.63
PAX6-236ENST00000638685 CRIPTQ9P021 101 aa4.89□□□□□ -1.63
PAX6-236ENST00000638685 R4GN34 69 aa4.86□□□□□ -1.63
PAX6-236ENST00000638685 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
PAX6-236ENST00000638685 MT1HP80294 61 aa4.7□□□□□ -1.66
PAX6-236ENST00000638685 M0R2T5 61 aa4.62□□□□□ -1.67
PAX6-236ENST00000638685 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
PAX6-236ENST00000638685 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
PAX6-236ENST00000638685 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
PAX6-236ENST00000638685 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
PAX6-236ENST00000638685 MT1FP04733 61 aa4.55□□□□□ -1.68
PAX6-236ENST00000638685 MT2AP02795 61 aa4.55□□□□□ -1.68
PAX6-236ENST00000638685 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
PAX6-236ENST00000638685 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
PAX6-236ENST00000638685 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
PAX6-236ENST00000638685 KRTAP10-10P60014 251 aa4.49□□□□□ -1.69
PAX6-236ENST00000638685 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
PAX6-236ENST00000638685 TNP1P09430 55 aa4.44□□□□□ -1.7
PAX6-236ENST00000638685 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
PAX6-236ENST00000638685 USH2AO75445 5202 aa4.43□□□□□ -1.7
PAX6-236ENST00000638685 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
PAX6-236ENST00000638685 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
PAX6-236ENST00000638685 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
PAX6-236ENST00000638685 MT1BP07438 61 aa4.33□□□□□ -1.72
PAX6-236ENST00000638685 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
PAX6-236ENST00000638685 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
PAX6-236ENST00000638685 MT1XP80297 61 aa4.22□□□□□ -1.73
PAX6-236ENST00000638685 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
PAX6-236ENST00000638685 KMT2DO14686 5537 aa4.19□□□□□ -1.74
PAX6-236ENST00000638685 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
PAX6-236ENST00000638685 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
PAX6-236ENST00000638685 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
PAX6-236ENST00000638685 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
PAX6-236ENST00000638685 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
PAX6-236ENST00000638685 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
PAX6-236ENST00000638685 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
PAX6-236ENST00000638685 KRTAP10-12P60413 245 aa4.05□□□□□ -1.76
PAX6-236ENST00000638685 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
PAX6-236ENST00000638685 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
PAX6-236ENST00000638685 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
PAX6-236ENST00000638685 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
PAX6-236ENST00000638685 FCGBPQ9Y6R7 5405 aaPredicted RBP3.95□□□□□ -1.78
PAX6-236ENST00000638685 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
PAX6-236ENST00000638685 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
PAX6-236ENST00000638685 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
PAX6-236ENST00000638685 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.79
PAX6-236ENST00000638685 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
PAX6-236ENST00000638685 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
PAX6-236ENST00000638685 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
PAX6-236ENST00000638685 KRTAP9-2Q9BYQ4 174 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms