RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
CTSD-213ENST00000637915 LRP2P98164 4655 aa8.51□□□□□ -1.05
CTSD-213ENST00000637915 LPAP08519 4548 aa8.49□□□□□ -1.05
CTSD-213ENST00000637915 SEC61GP60059 68 aa8.48□□□□□ -1.05
CTSD-213ENST00000637915 UQCR11O14957 56 aa8.46□□□□□ -1.05
CTSD-213ENST00000637915 A6NN06 94 aa8.46□□□□□ -1.06
CTSD-213ENST00000637915 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
CTSD-213ENST00000637915 MIR22HGQ0VDD5 57 aa8.41□□□□□ -1.06
CTSD-213ENST00000637915 KTN1-AS1Q86SY8 53 aa8.39□□□□□ -1.07
CTSD-213ENST00000637915 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
CTSD-213ENST00000637915 J3QL48 77 aa8.37□□□□□ -1.07
CTSD-213ENST00000637915 S4R3F8 94 aa8.35□□□□□ -1.07
CTSD-213ENST00000637915 H1FX-AS1Q4G0G2 97 aa8.31□□□□□ -1.08
CTSD-213ENST00000637915 A0A1B0GU33 70 aa8.3□□□□□ -1.08
CTSD-213ENST00000637915 H0YAA0 97 aa8.27□□□□□ -1.09
CTSD-213ENST00000637915 RBM12B-AS1Q9P1G2 102 aa8.26□□□□□ -1.09
CTSD-213ENST00000637915 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
CTSD-213ENST00000637915 SEC61BP60468 96 aaKnown RBP8.24□□□□□ -1.09
CTSD-213ENST00000637915 MUC17Q685J3 4493 aa8.21□□□□□ -1.1
CTSD-213ENST00000637915 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
CTSD-213ENST00000637915 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
CTSD-213ENST00000637915 KRTAP4-1Q9BYQ7 146 aa8.13□□□□□ -1.11
CTSD-213ENST00000637915 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
CTSD-213ENST00000637915 P0C880 135 aa8.08□□□□□ -1.12
CTSD-213ENST00000637915 KRTAP13-4Q3LI77 160 aa8.06□□□□□ -1.12
CTSD-213ENST00000637915 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
CTSD-213ENST00000637915 HERC1Q15751 4861 aa8.01□□□□□ -1.13
CTSD-213ENST00000637915 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
CTSD-213ENST00000637915 PRAC1Q96KF2 57 aa7.97□□□□□ -1.13
CTSD-213ENST00000637915 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.14
CTSD-213ENST00000637915 A0A0D9SG42 100 aa7.93□□□□□ -1.14
CTSD-213ENST00000637915 K7ERS5 55 aa7.91□□□□□ -1.14
CTSD-213ENST00000637915 MUC2Q02817 5179 aa7.91□□□□□ -1.14
CTSD-213ENST00000637915 M0QZ58 72 aa7.84□□□□□ -1.15
CTSD-213ENST00000637915 KRTAP12-2P59991 146 aa7.76□□□□□ -1.17
CTSD-213ENST00000637915 LINC01554Q52M75 96 aa7.75□□□□□ -1.17
CTSD-213ENST00000637915 FLGP20930 4061 aaPredicted RBP7.74□□□□□ -1.17
CTSD-213ENST00000637915 KRTAP12-1P59990 96 aa7.74□□□□□ -1.17
CTSD-213ENST00000637915 R4GN34 69 aa7.71□□□□□ -1.17
CTSD-213ENST00000637915 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
CTSD-213ENST00000637915 ROMO1P60602 79 aa7.7□□□□□ -1.18
CTSD-213ENST00000637915 SPINT4Q6UDR6 99 aa7.69□□□□□ -1.18
CTSD-213ENST00000637915 KRTAP25-1Q3LHN0 102 aa7.65□□□□□ -1.18
CTSD-213ENST00000637915 LCE2CQ5TA81 110 aa7.62□□□□□ -1.19
CTSD-213ENST00000637915 UBR4Q5T4S7 5183 aa7.6□□□□□ -1.19
CTSD-213ENST00000637915 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
CTSD-213ENST00000637915 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
CTSD-213ENST00000637915 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
CTSD-213ENST00000637915 MT1HP80294 61 aa7.43□□□□□ -1.22
CTSD-213ENST00000637915 M0R2T5 61 aa7.38□□□□□ -1.23
CTSD-213ENST00000637915 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
CTSD-213ENST00000637915 CAMK2N1Q7Z7J9 78 aa7.27□□□□□ -1.25
CTSD-213ENST00000637915 SPRR2GQ9BYE4 73 aa7.26□□□□□ -1.25
CTSD-213ENST00000637915 MT2AP02795 61 aa7.23□□□□□ -1.25
CTSD-213ENST00000637915 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
CTSD-213ENST00000637915 KRTAP9-8Q9BYQ0 159 aa7.22□□□□□ -1.25
CTSD-213ENST00000637915 MT1FP04733 61 aa7.21□□□□□ -1.26
CTSD-213ENST00000637915 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
CTSD-213ENST00000637915 PLAC4Q8WY50 150 aa7.08□□□□□ -1.28
CTSD-213ENST00000637915 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
CTSD-213ENST00000637915 TNP1P09430 55 aa6.97□□□□□ -1.29
CTSD-213ENST00000637915 KRTAP15-1Q3LI76 137 aa6.95□□□□□ -1.3
CTSD-213ENST00000637915 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
CTSD-213ENST00000637915 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
CTSD-213ENST00000637915 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
CTSD-213ENST00000637915 MT1BP07438 61 aa6.91□□□□□ -1.3
CTSD-213ENST00000637915 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
CTSD-213ENST00000637915 H3BS24 57 aa6.78□□□□□ -1.32
CTSD-213ENST00000637915 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
CTSD-213ENST00000637915 MT1XP80297 61 aa6.77□□□□□ -1.33
CTSD-213ENST00000637915 LCE2BO14633 110 aa6.69□□□□□ -1.34
CTSD-213ENST00000637915 NDUFAF8A1L188 74 aa6.66□□□□□ -1.34
CTSD-213ENST00000637915 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
CTSD-213ENST00000637915 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
CTSD-213ENST00000637915 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
CTSD-213ENST00000637915 USH2AO75445 5202 aa6.53□□□□□ -1.36
CTSD-213ENST00000637915 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
CTSD-213ENST00000637915 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
CTSD-213ENST00000637915 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
CTSD-213ENST00000637915 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
CTSD-213ENST00000637915 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
CTSD-213ENST00000637915 LCE2DQ5TA82 110 aaPredicted RBP6.27□□□□□ -1.4
CTSD-213ENST00000637915 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
CTSD-213ENST00000637915 KMT2DO14686 5537 aa6.23□□□□□ -1.41
CTSD-213ENST00000637915 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
CTSD-213ENST00000637915 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
CTSD-213ENST00000637915 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
CTSD-213ENST00000637915 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
CTSD-213ENST00000637915 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.43
CTSD-213ENST00000637915 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
CTSD-213ENST00000637915 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
CTSD-213ENST00000637915 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
CTSD-213ENST00000637915 A0A0A0MQY5 61 aa5.96□□□□□ -1.46
CTSD-213ENST00000637915 FCGBPQ9Y6R7 5405 aaPredicted RBP5.93□□□□□ -1.46
CTSD-213ENST00000637915 MT1EP04732 61 aa5.89□□□□□ -1.47
CTSD-213ENST00000637915 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
CTSD-213ENST00000637915 MT1LQ93083 61 aa5.84□□□□□ -1.48
CTSD-213ENST00000637915 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
CTSD-213ENST00000637915 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
CTSD-213ENST00000637915 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms