RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 MIR22HGQ0VDD5 57 aa9.63□□□□□ -0.87
CTSD-212ENST00000637815 KTN1-AS1Q86SY8 53 aa9.56□□□□□ -0.88
CTSD-212ENST00000637815 TPRXLQ17RH7 258 aa9.48□□□□□ -0.89
CTSD-212ENST00000637815 A0A1B0GU33 70 aa9.43□□□□□ -0.9
CTSD-212ENST00000637815 KRTAP3-3Q9BYR6 98 aa9.43□□□□□ -0.9
CTSD-212ENST00000637815 H0YAA0 97 aa9.42□□□□□ -0.9
CTSD-212ENST00000637815 H1FX-AS1Q4G0G2 97 aa9.41□□□□□ -0.9
CTSD-212ENST00000637815 KRTAP4-5Q9BYR2 181 aa9.41□□□□□ -0.9
CTSD-212ENST00000637815 LRP2P98164 4655 aa9.4□□□□□ -0.9
CTSD-212ENST00000637815 S4R3F8 94 aa9.36□□□□□ -0.91
CTSD-212ENST00000637815 LPAP08519 4548 aa9.35□□□□□ -0.91
CTSD-212ENST00000637815 ABCA13Q86UQ4 5058 aa9.33□□□□□ -0.92
CTSD-212ENST00000637815 KRTAP10-6P60371 365 aaPredicted RBP9.27□□□□□ -0.93
CTSD-212ENST00000637815 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
CTSD-212ENST00000637815 RBM12B-AS1Q9P1G2 102 aa9.21□□□□□ -0.94
CTSD-212ENST00000637815 ADM2Q7Z4H4 148 aa9.17□□□□□ -0.94
CTSD-212ENST00000637815 PRAC1Q96KF2 57 aa9.14□□□□□ -0.95
CTSD-212ENST00000637815 HERC2O95714 4834 aa9.14□□□□□ -0.95
CTSD-212ENST00000637815 KRTAP13-4Q3LI77 160 aa9.1□□□□□ -0.95
CTSD-212ENST00000637815 J3QL48 77 aa9.1□□□□□ -0.95
CTSD-212ENST00000637815 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
CTSD-212ENST00000637815 P0C880 135 aa9.09□□□□□ -0.95
CTSD-212ENST00000637815 MUC17Q685J3 4493 aa9.08□□□□□ -0.96
CTSD-212ENST00000637815 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
CTSD-212ENST00000637815 K7ERS5 55 aa9.05□□□□□ -0.96
CTSD-212ENST00000637815 BIRC6Q9NR09 4857 aa9.03□□□□□ -0.96
CTSD-212ENST00000637815 KRTAP4-1Q9BYQ7 146 aa8.95□□□□□ -0.98
CTSD-212ENST00000637815 A0A0D9SG42 100 aa8.95□□□□□ -0.98
CTSD-212ENST00000637815 M0QZ58 72 aa8.86□□□□□ -0.99
CTSD-212ENST00000637815 KRTAP19-2Q3LHN2 52 aa8.82□□□□□ -1
CTSD-212ENST00000637815 ROMO1P60602 79 aa8.81□□□□□ -1
CTSD-212ENST00000637815 KRTAP12-2P59991 146 aa8.78□□□□□ -1
CTSD-212ENST00000637815 LINC01554Q52M75 96 aa8.78□□□□□ -1
CTSD-212ENST00000637815 KRTAP25-1Q3LHN0 102 aa8.78□□□□□ -1
CTSD-212ENST00000637815 KRTAP12-1P59990 96 aa8.76□□□□□ -1.01
CTSD-212ENST00000637815 SPINT4Q6UDR6 99 aa8.68□□□□□ -1.02
CTSD-212ENST00000637815 HERC1Q15751 4861 aa8.67□□□□□ -1.02
CTSD-212ENST00000637815 FLGP20930 4061 aaPredicted RBP8.67□□□□□ -1.02
CTSD-212ENST00000637815 PCLOQ9Y6V0 5065 aa8.67□□□□□ -1.02
CTSD-212ENST00000637815 R4GN34 69 aa8.65□□□□□ -1.02
CTSD-212ENST00000637815 HMCN2Q8NDA2 5059 aa8.64□□□□□ -1.03
CTSD-212ENST00000637815 CRIPTQ9P021 101 aa8.63□□□□□ -1.03
CTSD-212ENST00000637815 MUC2Q02817 5179 aa8.6□□□□□ -1.03
CTSD-212ENST00000637815 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
CTSD-212ENST00000637815 C10orf95Q9H7T3 257 aa8.41□□□□□ -1.06
CTSD-212ENST00000637815 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
CTSD-212ENST00000637815 FAT4Q6V0I7 4981 aa8.24□□□□□ -1.09
CTSD-212ENST00000637815 RNF213Q63HN8 5207 aa8.21□□□□□ -1.1
CTSD-212ENST00000637815 CAMK2N1Q7Z7J9 78 aa8.16□□□□□ -1.1
CTSD-212ENST00000637815 MT1HP80294 61 aa8.15□□□□□ -1.1
CTSD-212ENST00000637815 UBR4Q5T4S7 5183 aa8.15□□□□□ -1.1
CTSD-212ENST00000637815 M0R2T5 61 aa8.08□□□□□ -1.12
CTSD-212ENST00000637815 SPRR2GQ9BYE4 73 aa8.08□□□□□ -1.12
CTSD-212ENST00000637815 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
CTSD-212ENST00000637815 MT2AP02795 61 aa7.96□□□□□ -1.14
CTSD-212ENST00000637815 MT1FP04733 61 aa7.94□□□□□ -1.14
CTSD-212ENST00000637815 KRTAP15-1Q3LI76 137 aa7.94□□□□□ -1.14
CTSD-212ENST00000637815 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
CTSD-212ENST00000637815 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
CTSD-212ENST00000637815 KRTAP10-10P60014 251 aa7.9□□□□□ -1.15
CTSD-212ENST00000637815 PLAC4Q8WY50 150 aa7.89□□□□□ -1.15
CTSD-212ENST00000637815 TNP1P09430 55 aa7.86□□□□□ -1.15
CTSD-212ENST00000637815 KRTAP23-1A1A580 65 aa7.79□□□□□ -1.16
CTSD-212ENST00000637815 KRTAP19-8Q3LI54 63 aa7.77□□□□□ -1.17
CTSD-212ENST00000637815 MT1BP07438 61 aa7.64□□□□□ -1.19
CTSD-212ENST00000637815 KRTAP9-3Q9BYQ3 159 aa7.62□□□□□ -1.19
CTSD-212ENST00000637815 NDUFAF8A1L188 74 aa7.56□□□□□ -1.2
CTSD-212ENST00000637815 H3BS24 57 aa7.56□□□□□ -1.2
CTSD-212ENST00000637815 KRTAP10-5P60370 271 aa7.53□□□□□ -1.2
CTSD-212ENST00000637815 MT1XP80297 61 aa7.53□□□□□ -1.2
CTSD-212ENST00000637815 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
CTSD-212ENST00000637815 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
CTSD-212ENST00000637815 LCE2BO14633 110 aa7.34□□□□□ -1.24
CTSD-212ENST00000637815 KRTAP8-1Q8IUC2 63 aa7.34□□□□□ -1.24
CTSD-212ENST00000637815 SPRR5A0A1B0GTR4 108 aa7.32□□□□□ -1.24
CTSD-212ENST00000637815 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
CTSD-212ENST00000637815 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
CTSD-212ENST00000637815 LUZP6Q538Z0 58 aa7.28□□□□□ -1.24
CTSD-212ENST00000637815 KRTAP10-7P60409 375 aaPredicted RBP7.26□□□□□ -1.25
CTSD-212ENST00000637815 KRTAP12-3P60328 96 aa7.14□□□□□ -1.27
CTSD-212ENST00000637815 USH2AO75445 5202 aa7.07□□□□□ -1.28
CTSD-212ENST00000637815 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
CTSD-212ENST00000637815 A0A0A0MQY5 61 aa6.9□□□□□ -1.3
CTSD-212ENST00000637815 KMT2DO14686 5537 aa6.85□□□□□ -1.31
CTSD-212ENST00000637815 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
CTSD-212ENST00000637815 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
CTSD-212ENST00000637815 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
CTSD-212ENST00000637815 KRTAP19-6Q3LI70 58 aa6.72□□□□□ -1.33
CTSD-212ENST00000637815 LCE3CQ5T5A8 94 aa6.72□□□□□ -1.33
CTSD-212ENST00000637815 KRTAP19-7Q3SYF9 63 aa6.71□□□□□ -1.33
CTSD-212ENST00000637815 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
CTSD-212ENST00000637815 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
CTSD-212ENST00000637815 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
CTSD-212ENST00000637815 MT1EP04732 61 aa6.54□□□□□ -1.36
CTSD-212ENST00000637815 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
CTSD-212ENST00000637815 MT1LQ93083 61 aa6.5□□□□□ -1.37
CTSD-212ENST00000637815 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
CTSD-212ENST00000637815 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
CTSD-212ENST00000637815 FCGBPQ9Y6R7 5405 aaPredicted RBP6.35□□□□□ -1.39
CTSD-212ENST00000637815 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms