RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 C7orf65Q6ZTY9 151 aa6.84□□□□□ -1.31
CNTNAP2-220ENST00000637555 XP32Q5T750 250 aa6.83□□□□□ -1.32
CNTNAP2-220ENST00000637555 A6NN06 94 aa6.82□□□□□ -1.32
CNTNAP2-220ENST00000637555 C20orf166-AS1Q96NR2 134 aa6.81□□□□□ -1.32
CNTNAP2-220ENST00000637555 A8MUU9 505 aa6.8□□□□□ -1.32
CNTNAP2-220ENST00000637555 A0A1B0GU69 56 aa6.79□□□□□ -1.32
CNTNAP2-220ENST00000637555 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
CNTNAP2-220ENST00000637555 LRP2P98164 4655 aa6.75□□□□□ -1.33
CNTNAP2-220ENST00000637555 KTN1-AS1Q86SY8 53 aa6.73□□□□□ -1.33
CNTNAP2-220ENST00000637555 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.33
CNTNAP2-220ENST00000637555 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
CNTNAP2-220ENST00000637555 MUC17Q685J3 4493 aa6.69□□□□□ -1.34
CNTNAP2-220ENST00000637555 LCE2DQ5TA82 110 aaPredicted RBP6.66□□□□□ -1.34
CNTNAP2-220ENST00000637555 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
CNTNAP2-220ENST00000637555 UQCR11O14957 56 aa6.65□□□□□ -1.34
CNTNAP2-220ENST00000637555 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
CNTNAP2-220ENST00000637555 ADM2Q7Z4H4 148 aa6.59□□□□□ -1.35
CNTNAP2-220ENST00000637555 RBM12B-AS1Q9P1G2 102 aa6.59□□□□□ -1.35
CNTNAP2-220ENST00000637555 KRTAP4-1Q9BYQ7 146 aa6.58□□□□□ -1.36
CNTNAP2-220ENST00000637555 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
CNTNAP2-220ENST00000637555 H0YAA0 97 aa6.53□□□□□ -1.36
CNTNAP2-220ENST00000637555 COX6B2Q6YFQ2 88 aa6.5□□□□□ -1.37
CNTNAP2-220ENST00000637555 UBR4Q5T4S7 5183 aa6.5□□□□□ -1.37
CNTNAP2-220ENST00000637555 A0A1B0GU33 70 aa6.45□□□□□ -1.38
CNTNAP2-220ENST00000637555 RNF213Q63HN8 5207 aa6.45□□□□□ -1.38
CNTNAP2-220ENST00000637555 H3BS24 57 aa6.43□□□□□ -1.38
CNTNAP2-220ENST00000637555 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
CNTNAP2-220ENST00000637555 KRTAP3-3Q9BYR6 98 aa6.42□□□□□ -1.38
CNTNAP2-220ENST00000637555 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
CNTNAP2-220ENST00000637555 MUC2Q02817 5179 aa6.38□□□□□ -1.39
CNTNAP2-220ENST00000637555 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
CNTNAP2-220ENST00000637555 CSAG1Q6PB30 78 aa6.34□□□□□ -1.39
CNTNAP2-220ENST00000637555 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
CNTNAP2-220ENST00000637555 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
CNTNAP2-220ENST00000637555 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
CNTNAP2-220ENST00000637555 KRTAP13-4Q3LI77 160 aa6.3□□□□□ -1.4
CNTNAP2-220ENST00000637555 S4R3F8 94 aa6.27□□□□□ -1.41
CNTNAP2-220ENST00000637555 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
CNTNAP2-220ENST00000637555 P0C880 135 aa6.24□□□□□ -1.41
CNTNAP2-220ENST00000637555 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.41
CNTNAP2-220ENST00000637555 A0A0D9SG42 100 aa6.21□□□□□ -1.42
CNTNAP2-220ENST00000637555 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
CNTNAP2-220ENST00000637555 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
CNTNAP2-220ENST00000637555 MT1HP80294 61 aa6.17□□□□□ -1.42
CNTNAP2-220ENST00000637555 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
CNTNAP2-220ENST00000637555 K7ERS5 55 aa6.13□□□□□ -1.43
CNTNAP2-220ENST00000637555 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
CNTNAP2-220ENST00000637555 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
CNTNAP2-220ENST00000637555 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
CNTNAP2-220ENST00000637555 KRTAP12-2P59991 146 aa6.07□□□□□ -1.44
CNTNAP2-220ENST00000637555 ROMO1P60602 79 aa6.07□□□□□ -1.44
CNTNAP2-220ENST00000637555 M0R2T5 61 aa6.01□□□□□ -1.45
CNTNAP2-220ENST00000637555 KRTAP12-1P59990 96 aa6□□□□□ -1.45
CNTNAP2-220ENST00000637555 SPINT4Q6UDR6 99 aa5.97□□□□□ -1.45
CNTNAP2-220ENST00000637555 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
CNTNAP2-220ENST00000637555 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.46
CNTNAP2-220ENST00000637555 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
CNTNAP2-220ENST00000637555 M0QZ58 72 aa5.92□□□□□ -1.46
CNTNAP2-220ENST00000637555 MT2AP02795 61 aa5.88□□□□□ -1.47
CNTNAP2-220ENST00000637555 MT1FP04733 61 aa5.85□□□□□ -1.47
CNTNAP2-220ENST00000637555 R4GN34 69 aa5.82□□□□□ -1.48
CNTNAP2-220ENST00000637555 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
CNTNAP2-220ENST00000637555 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
CNTNAP2-220ENST00000637555 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
CNTNAP2-220ENST00000637555 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
CNTNAP2-220ENST00000637555 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
CNTNAP2-220ENST00000637555 LCE2BO14633 110 aa5.59□□□□□ -1.51
CNTNAP2-220ENST00000637555 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
CNTNAP2-220ENST00000637555 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
CNTNAP2-220ENST00000637555 MT1BP07438 61 aa5.5□□□□□ -1.53
CNTNAP2-220ENST00000637555 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
CNTNAP2-220ENST00000637555 NDUFAF8A1L188 74 aa5.46□□□□□ -1.54
CNTNAP2-220ENST00000637555 USH2AO75445 5202 aa5.45□□□□□ -1.54
CNTNAP2-220ENST00000637555 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
CNTNAP2-220ENST00000637555 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
CNTNAP2-220ENST00000637555 SSPOA2VEC9 5147 aa5.31□□□□□ -1.56
CNTNAP2-220ENST00000637555 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
CNTNAP2-220ENST00000637555 TNP1P09430 55 aa5.28□□□□□ -1.56
CNTNAP2-220ENST00000637555 MT1XP80297 61 aa5.27□□□□□ -1.57
CNTNAP2-220ENST00000637555 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
CNTNAP2-220ENST00000637555 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
CNTNAP2-220ENST00000637555 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
CNTNAP2-220ENST00000637555 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
CNTNAP2-220ENST00000637555 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.58
CNTNAP2-220ENST00000637555 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
CNTNAP2-220ENST00000637555 FCGBPQ9Y6R7 5405 aaPredicted RBP5.1□□□□□ -1.59
CNTNAP2-220ENST00000637555 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
CNTNAP2-220ENST00000637555 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
CNTNAP2-220ENST00000637555 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
CNTNAP2-220ENST00000637555 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
CNTNAP2-220ENST00000637555 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
CNTNAP2-220ENST00000637555 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
CNTNAP2-220ENST00000637555 KRTAP10-12P60413 245 aa5□□□□□ -1.61
CNTNAP2-220ENST00000637555 KRTAP8-1Q8IUC2 63 aa4.92□□□□□ -1.62
CNTNAP2-220ENST00000637555 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
CNTNAP2-220ENST00000637555 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
CNTNAP2-220ENST00000637555 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
CNTNAP2-220ENST00000637555 KMT2DO14686 5537 aa4.83□□□□□ -1.64
CNTNAP2-220ENST00000637555 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
CNTNAP2-220ENST00000637555 MACF1Q9UPN3 7388 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms