RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 KRTAP3-1Q9BYR8 98 aa10.58□□□□□ -0.72
CACNA1A-241ENST00000637475 Q5VSD8 79 aa10.56□□□□□ -0.72
CACNA1A-241ENST00000637475 KRTAP25-1Q3LHN0 102 aa10.56□□□□□ -0.72
CACNA1A-241ENST00000637475 VPS13BQ7Z7G8 4022 aa10.5□□□□□ -0.73
CACNA1A-241ENST00000637475 HERC1Q15751 4861 aa10.45□□□□□ -0.74
CACNA1A-241ENST00000637475 MYCBP2O75592 4640 aa10.45□□□□□ -0.74
CACNA1A-241ENST00000637475 FLG2Q5D862 2391 aaPredicted RBP10.42□□□□□ -0.74
CACNA1A-241ENST00000637475 COX6B2Q6YFQ2 88 aa10.41□□□□□ -0.74
CACNA1A-241ENST00000637475 DMBT1Q9UGM3 2413 aaPredicted RBP10.4□□□□□ -0.74
CACNA1A-241ENST00000637475 K7ERS5 55 aa10.37□□□□□ -0.75
CACNA1A-241ENST00000637475 PKHD1L1Q86WI1 4243 aa10.36□□□□□ -0.75
CACNA1A-241ENST00000637475 C9orf92A6NGG3 77 aa10.35□□□□□ -0.75
CACNA1A-241ENST00000637475 ROMO1P60602 79 aa10.32□□□□□ -0.76
CACNA1A-241ENST00000637475 J3QL48 77 aa10.26□□□□□ -0.77
CACNA1A-241ENST00000637475 KRTAP10-4P60372 401 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-241ENST00000637475 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-241ENST00000637475 KRTAP10-6P60371 365 aaPredicted RBP10.17□□□□□ -0.78
CACNA1A-241ENST00000637475 FAT3Q8TDW7 4589 aa10.17□□□□□ -0.78
CACNA1A-241ENST00000637475 RPL37P61927 97 aaKnown RBP10.16□□□□□ -0.78
CACNA1A-241ENST00000637475 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
CACNA1A-241ENST00000637475 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
CACNA1A-241ENST00000637475 KRTAP13-4Q3LI77 160 aa10.04□□□□□ -0.8
CACNA1A-241ENST00000637475 HMCN2Q8NDA2 5059 aa10□□□□□ -0.81
CACNA1A-241ENST00000637475 CRIPTQ9P021 101 aa9.99□□□□□ -0.81
CACNA1A-241ENST00000637475 MT1HL1P0DM35 61 aa9.98□□□□□ -0.81
CACNA1A-241ENST00000637475 P0C880 135 aa9.95□□□□□ -0.82
CACNA1A-241ENST00000637475 S4R3F8 94 aa9.95□□□□□ -0.82
CACNA1A-241ENST00000637475 TPRXLQ17RH7 258 aa9.93□□□□□ -0.82
CACNA1A-241ENST00000637475 TNXBP22105 4242 aa9.9□□□□□ -0.82
CACNA1A-241ENST00000637475 KRTAP10-8P60410 259 aa9.88□□□□□ -0.83
CACNA1A-241ENST00000637475 UBR4Q5T4S7 5183 aa9.87□□□□□ -0.83
CACNA1A-241ENST00000637475 A0A0D9SG42 100 aa9.85□□□□□ -0.83
CACNA1A-241ENST00000637475 XP32Q5T750 250 aa9.82□□□□□ -0.84
CACNA1A-241ENST00000637475 KRTAP12-2P59991 146 aa9.74□□□□□ -0.85
CACNA1A-241ENST00000637475 SPINT4Q6UDR6 99 aa9.74□□□□□ -0.85
CACNA1A-241ENST00000637475 KRTAP15-1Q3LI76 137 aa9.73□□□□□ -0.85
CACNA1A-241ENST00000637475 KRTAP12-1P59990 96 aa9.72□□□□□ -0.85
CACNA1A-241ENST00000637475 LRP2P98164 4655 aa9.71□□□□□ -0.86
CACNA1A-241ENST00000637475 C10orf95Q9H7T3 257 aa9.69□□□□□ -0.86
CACNA1A-241ENST00000637475 M0QZ58 72 aa9.68□□□□□ -0.86
CACNA1A-241ENST00000637475 A0A0A0MQY5 61 aa9.65□□□□□ -0.86
CACNA1A-241ENST00000637475 LPAP08519 4548 aa9.56□□□□□ -0.88
CACNA1A-241ENST00000637475 RNF213Q63HN8 5207 aa9.56□□□□□ -0.88
CACNA1A-241ENST00000637475 NDUFAF8A1L188 74 aa9.44□□□□□ -0.9
CACNA1A-241ENST00000637475 MUC2Q02817 5179 aa9.25□□□□□ -0.93
CACNA1A-241ENST00000637475 R4GN34 69 aa9.2□□□□□ -0.94
CACNA1A-241ENST00000637475 PLAC4Q8WY50 150 aa9.08□□□□□ -0.96
CACNA1A-241ENST00000637475 MUC17Q685J3 4493 aa9.06□□□□□ -0.96
CACNA1A-241ENST00000637475 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
CACNA1A-241ENST00000637475 SEC61BP60468 96 aaKnown RBP8.99□□□□□ -0.97
CACNA1A-241ENST00000637475 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
CACNA1A-241ENST00000637475 FAT4Q6V0I7 4981 aa8.97□□□□□ -0.97
CACNA1A-241ENST00000637475 LUZP6Q538Z0 58 aa8.94□□□□□ -0.98
CACNA1A-241ENST00000637475 LCE2AQ5TA79 106 aaPredicted RBP8.93□□□□□ -0.98
CACNA1A-241ENST00000637475 KRTAP19-2Q3LHN2 52 aa8.85□□□□□ -0.99
CACNA1A-241ENST00000637475 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
CACNA1A-241ENST00000637475 KRTAP9-2Q9BYQ4 174 aa8.81□□□□□ -1
CACNA1A-241ENST00000637475 KRTAP23-1A1A580 65 aa8.78□□□□□ -1
CACNA1A-241ENST00000637475 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
CACNA1A-241ENST00000637475 SPRR5A0A1B0GTR4 108 aa8.61□□□□□ -1.03
CACNA1A-241ENST00000637475 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
CACNA1A-241ENST00000637475 TNP1P09430 55 aa8.57□□□□□ -1.04
CACNA1A-241ENST00000637475 KRTAP9-6A0A140TA67 174 aa8.53□□□□□ -1.04
CACNA1A-241ENST00000637475 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
CACNA1A-241ENST00000637475 MT1HP80294 61 aa8.5□□□□□ -1.05
CACNA1A-241ENST00000637475 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
CACNA1A-241ENST00000637475 FSIP2Q5CZC0 6907 aa8.35□□□□□ -1.07
CACNA1A-241ENST00000637475 M0R2T5 61 aa8.33□□□□□ -1.08
CACNA1A-241ENST00000637475 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
CACNA1A-241ENST00000637475 SPRR2GQ9BYE4 73 aa8.28□□□□□ -1.08
CACNA1A-241ENST00000637475 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
CACNA1A-241ENST00000637475 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.12
CACNA1A-241ENST00000637475 LCE3AQ5TA76 89 aa8.01□□□□□ -1.13
CACNA1A-241ENST00000637475 KRTAP8-1Q8IUC2 63 aa7.98□□□□□ -1.13
CACNA1A-241ENST00000637475 MT2AP02795 61 aa7.9□□□□□ -1.14
CACNA1A-241ENST00000637475 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
CACNA1A-241ENST00000637475 KRTAP19-8Q3LI54 63 aa7.88□□□□□ -1.15
CACNA1A-241ENST00000637475 USH2AO75445 5202 aa7.87□□□□□ -1.15
CACNA1A-241ENST00000637475 MT1FP04733 61 aa7.85□□□□□ -1.15
CACNA1A-241ENST00000637475 INE1O15225 51 aa7.83□□□□□ -1.16
CACNA1A-241ENST00000637475 SSPOA2VEC9 5147 aa7.82□□□□□ -1.16
CACNA1A-241ENST00000637475 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
CACNA1A-241ENST00000637475 LCE2BO14633 110 aa7.78□□□□□ -1.16
CACNA1A-241ENST00000637475 KRTAP9-3Q9BYQ3 159 aa7.77□□□□□ -1.17
CACNA1A-241ENST00000637475 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.73□□□□□ -1.17
CACNA1A-241ENST00000637475 KRTAP10-5P60370 271 aa7.71□□□□□ -1.18
CACNA1A-241ENST00000637475 MT1XP80297 61 aa7.68□□□□□ -1.18
CACNA1A-241ENST00000637475 KRTAP9-7A8MTY7 169 aa7.67□□□□□ -1.18
CACNA1A-241ENST00000637475 MT1BP07438 61 aa7.67□□□□□ -1.18
CACNA1A-241ENST00000637475 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
CACNA1A-241ENST00000637475 FCGBPQ9Y6R7 5405 aaPredicted RBP7.65□□□□□ -1.18
CACNA1A-241ENST00000637475 KRTAP10-12P60413 245 aa7.62□□□□□ -1.19
CACNA1A-241ENST00000637475 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
CACNA1A-241ENST00000637475 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
CACNA1A-241ENST00000637475 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
CACNA1A-241ENST00000637475 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
CACNA1A-241ENST00000637475 LCE3CQ5T5A8 94 aa7.26□□□□□ -1.25
CACNA1A-241ENST00000637475 KRTAP19-5Q3LI72 72 aa7.19□□□□□ -1.26
CACNA1A-241ENST00000637475 KRTAP6-3Q3LI67 103 aa7.17□□□□□ -1.26
CACNA1A-241ENST00000637475 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms