RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	LRP1	Q07954	4544 aa	Known RBP	5.92	□□□□□ -1.46
ARHGEF9-223	ENST00000636102		H0YAA0	97 aa		5.89	□□□□□ -1.47
ARHGEF9-223	ENST00000636102	FLG2	Q5D862	2391 aa	Predicted RBP	5.88	□□□□□ -1.47
ARHGEF9-223	ENST00000636102	MYCBP2	O75592	4640 aa		5.87	□□□□□ -1.47
ARHGEF9-223	ENST00000636102	MT1HL1	P0DM35	61 aa		5.86	□□□□□ -1.47
ARHGEF9-223	ENST00000636102	TNXB	P22105	4242 aa		5.85	□□□□□ -1.47
ARHGEF9-223	ENST00000636102	FAT3	Q8TDW7	4589 aa		5.85	□□□□□ -1.47
ARHGEF9-223	ENST00000636102	HERC2	O95714	4834 aa		5.84	□□□□□ -1.47
ARHGEF9-223	ENST00000636102	ABCA13	Q86UQ4	5058 aa		5.81	□□□□□ -1.48
ARHGEF9-223	ENST00000636102		A0A1B0GU33	70 aa		5.81	□□□□□ -1.48
ARHGEF9-223	ENST00000636102		P0C880	135 aa		5.8	□□□□□ -1.48
ARHGEF9-223	ENST00000636102		K7ERS5	55 aa		5.78	□□□□□ -1.48
ARHGEF9-223	ENST00000636102	H1FX-AS1	Q4G0G2	97 aa		5.78	□□□□□ -1.48
ARHGEF9-223	ENST00000636102	C20orf166-AS1	Q96NR2	134 aa		5.77	□□□□□ -1.49
ARHGEF9-223	ENST00000636102	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGEF9-223	ENST00000636102		J3QL48	77 aa		5.72	□□□□□ -1.49
ARHGEF9-223	ENST00000636102	C9orf92	A6NGG3	77 aa		5.69	□□□□□ -1.5
ARHGEF9-223	ENST00000636102	CRIPT	Q9P021	101 aa		5.65	□□□□□ -1.5
ARHGEF9-223	ENST00000636102	PCLO	Q9Y6V0	5065 aa		5.64	□□□□□ -1.51
ARHGEF9-223	ENST00000636102	SPINT4	Q6UDR6	99 aa		5.63	□□□□□ -1.51
ARHGEF9-223	ENST00000636102	COX6B2	Q6YFQ2	88 aa		5.62	□□□□□ -1.51
ARHGEF9-223	ENST00000636102	KRTAP3-1	Q9BYR8	98 aa		5.6	□□□□□ -1.51
ARHGEF9-223	ENST00000636102	KRTAP15-1	Q3LI76	137 aa		5.59	□□□□□ -1.51
ARHGEF9-223	ENST00000636102	RPL37	P61927	97 aa	Known RBP	5.58	□□□□□ -1.52
ARHGEF9-223	ENST00000636102	TPRXL	Q17RH7	258 aa		5.57	□□□□□ -1.52
ARHGEF9-223	ENST00000636102	XP32	Q5T750	250 aa		5.56	□□□□□ -1.52
ARHGEF9-223	ENST00000636102	NDUFAF8	A1L188	74 aa		5.55	□□□□□ -1.52
ARHGEF9-223	ENST00000636102	LPA	P08519	4548 aa		5.51	□□□□□ -1.53
ARHGEF9-223	ENST00000636102	HERC1	Q15751	4861 aa		5.5	□□□□□ -1.53
ARHGEF9-223	ENST00000636102	KRTAP10-6	P60371	365 aa	Predicted RBP	5.45	□□□□□ -1.54
ARHGEF9-223	ENST00000636102	LRP2	P98164	4655 aa		5.44	□□□□□ -1.54
ARHGEF9-223	ENST00000636102	C10orf95	Q9H7T3	257 aa		5.42	□□□□□ -1.54
ARHGEF9-223	ENST00000636102	KRTAP13-4	Q3LI77	160 aa		5.41	□□□□□ -1.54
ARHGEF9-223	ENST00000636102		A0A0A0MQY5	61 aa		5.41	□□□□□ -1.54
ARHGEF9-223	ENST00000636102	HMCN2	Q8NDA2	5059 aa		5.4	□□□□□ -1.54
ARHGEF9-223	ENST00000636102		A0A0D9SG42	100 aa		5.38	□□□□□ -1.55
ARHGEF9-223	ENST00000636102	KRTAP3-2	Q9BYR7	98 aa		5.38	□□□□□ -1.55
ARHGEF9-223	ENST00000636102		S4R3F8	94 aa		5.37	□□□□□ -1.55
ARHGEF9-223	ENST00000636102	SEC61B	P60468	96 aa	Known RBP	5.35	□□□□□ -1.55
ARHGEF9-223	ENST00000636102	KRTAP3-3	Q9BYR6	98 aa		5.35	□□□□□ -1.55
ARHGEF9-223	ENST00000636102	KRTAP4-1	Q9BYQ7	146 aa		5.32	□□□□□ -1.56
ARHGEF9-223	ENST00000636102	KRTAP12-2	P59991	146 aa		5.29	□□□□□ -1.56
ARHGEF9-223	ENST00000636102	MUC17	Q685J3	4493 aa		5.27	□□□□□ -1.57
ARHGEF9-223	ENST00000636102	KRTAP12-1	P59990	96 aa		5.26	□□□□□ -1.57
ARHGEF9-223	ENST00000636102	MUC2	Q02817	5179 aa		5.24	□□□□□ -1.57
ARHGEF9-223	ENST00000636102	LUZP6	Q538Z0	58 aa		5.24	□□□□□ -1.57
ARHGEF9-223	ENST00000636102	UBR4	Q5T4S7	5183 aa		5.23	□□□□□ -1.57
ARHGEF9-223	ENST00000636102		M0QZ58	72 aa		5.17	□□□□□ -1.58
ARHGEF9-223	ENST00000636102	KRTAP19-2	Q3LHN2	52 aa		5.14	□□□□□ -1.59
ARHGEF9-223	ENST00000636102	RNF213	Q63HN8	5207 aa		5.13	□□□□□ -1.59
ARHGEF9-223	ENST00000636102	PLAC4	Q8WY50	150 aa		5.13	□□□□□ -1.59
ARHGEF9-223	ENST00000636102	LCE2C	Q5TA81	110 aa		5.05	□□□□□ -1.6
ARHGEF9-223	ENST00000636102	FAT4	Q6V0I7	4981 aa		4.98	□□□□□ -1.61
ARHGEF9-223	ENST00000636102		R4GN34	69 aa		4.98	□□□□□ -1.61
ARHGEF9-223	ENST00000636102	FLG	P20930	4061 aa	Predicted RBP	4.97	□□□□□ -1.61
ARHGEF9-223	ENST00000636102	PP632	Q6XCG6	107 aa		4.96	□□□□□ -1.62
ARHGEF9-223	ENST00000636102	MT1H	P80294	61 aa		4.94	□□□□□ -1.62
ARHGEF9-223	ENST00000636102		M0R2T5	61 aa		4.9	□□□□□ -1.63
ARHGEF9-223	ENST00000636102	SPRR5	A0A1B0GTR4	108 aa		4.78	□□□□□ -1.64
ARHGEF9-223	ENST00000636102	LOR	P23490	312 aa	Predicted RBP	4.78	□□□□□ -1.64
ARHGEF9-223	ENST00000636102	LCE2A	Q5TA79	106 aa	Predicted RBP	4.78	□□□□□ -1.64
ARHGEF9-223	ENST00000636102	KRTAP9-8	Q9BYQ0	159 aa		4.76	□□□□□ -1.65
ARHGEF9-223	ENST00000636102	CAMK2N1	Q7Z7J9	78 aa		4.75	□□□□□ -1.65
ARHGEF9-223	ENST00000636102	KRTAP23-1	A1A580	65 aa		4.73	□□□□□ -1.65
ARHGEF9-223	ENST00000636102	MT2A	P02795	61 aa		4.73	□□□□□ -1.65
ARHGEF9-223	ENST00000636102	LCE2D	Q5TA82	110 aa	Predicted RBP	4.72	□□□□□ -1.65
ARHGEF9-223	ENST00000636102	MT1F	P04733	61 aa		4.7	□□□□□ -1.66
ARHGEF9-223	ENST00000636102	KRTAP10-10	P60014	251 aa		4.7	□□□□□ -1.66
ARHGEF9-223	ENST00000636102	PRO2289	Q9P1D8	64 aa		4.68	□□□□□ -1.66
ARHGEF9-223	ENST00000636102	KRTAP19-1	Q8IUB9	90 aa		4.6	□□□□□ -1.67
ARHGEF9-223	ENST00000636102	TNP1	P09430	55 aa		4.6	□□□□□ -1.67
ARHGEF9-223	ENST00000636102	SPRR2G	Q9BYE4	73 aa		4.58	□□□□□ -1.68
ARHGEF9-223	ENST00000636102	KRTAP9-3	Q9BYQ3	159 aa		4.58	□□□□□ -1.68
ARHGEF9-223	ENST00000636102	INE1	O15225	51 aa		4.57	□□□□□ -1.68
ARHGEF9-223	ENST00000636102	LCE2B	O14633	110 aa		4.48	□□□□□ -1.69
ARHGEF9-223	ENST00000636102	KRTAP19-8	Q3LI54	63 aa		4.47	□□□□□ -1.69
ARHGEF9-223	ENST00000636102	MT1B	P07438	61 aa		4.44	□□□□□ -1.7
ARHGEF9-223	ENST00000636102	USH2A	O75445	5202 aa		4.37	□□□□□ -1.71
ARHGEF9-223	ENST00000636102	FSIP2	Q5CZC0	6907 aa		4.29	□□□□□ -1.72
ARHGEF9-223	ENST00000636102	KRTAP10-5	P60370	271 aa		4.28	□□□□□ -1.72
ARHGEF9-223	ENST00000636102	MT1X	P80297	61 aa		4.28	□□□□□ -1.72
ARHGEF9-223	ENST00000636102	LCE3A	Q5TA76	89 aa		4.25	□□□□□ -1.73
ARHGEF9-223	ENST00000636102	KRTAP8-1	Q8IUC2	63 aa		4.23	□□□□□ -1.73
ARHGEF9-223	ENST00000636102	KRTAP9-2	Q9BYQ4	174 aa		4.23	□□□□□ -1.73
ARHGEF9-223	ENST00000636102	SSPO	A2VEC9	5147 aa		4.23	□□□□□ -1.73
ARHGEF9-223	ENST00000636102	KRTAP19-6	Q3LI70	58 aa		4.18	□□□□□ -1.74
ARHGEF9-223	ENST00000636102	KRTAP10-12	P60413	245 aa		4.14	□□□□□ -1.75
ARHGEF9-223	ENST00000636102	KRTAP10-7	P60409	375 aa	Predicted RBP	4.12	□□□□□ -1.75
ARHGEF9-223	ENST00000636102	KRTAP12-3	P60328	96 aa		4.09	□□□□□ -1.75
ARHGEF9-223	ENST00000636102	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.08	□□□□□ -1.76
ARHGEF9-223	ENST00000636102	CRCT1	Q9UGL9	99 aa		4.07	□□□□□ -1.76
ARHGEF9-223	ENST00000636102	KRTAP4-8	A0A0G2JLE6	195 aa		4	□□□□□ -1.77
ARHGEF9-223	ENST00000636102	KRTAP4-8	Q9BYQ9	185 aa		4	□□□□□ -1.77
ARHGEF9-223	ENST00000636102	KMT2D	O14686	5537 aa		4	□□□□□ -1.77
ARHGEF9-223	ENST00000636102	KRTAP9-6	A0A140TA67	174 aa		3.91	□□□□□ -1.78
ARHGEF9-223	ENST00000636102	KRTAP19-4	Q3LI73	84 aa		3.91	□□□□□ -1.78
ARHGEF9-223	ENST00000636102	KRTAP19-5	Q3LI72	72 aa		3.88	□□□□□ -1.79
ARHGEF9-223	ENST00000636102	MACF1	Q9UPN3	7388 aa	Known RBP	3.87	□□□□□ -1.79
ARHGEF9-223	ENST00000636102	LCE3C	Q5T5A8	94 aa		3.86	□□□□□ -1.79
ARHGEF9-223	ENST00000636102	SYNE2	Q8WXH0	6885 aa	Known RBP	3.82	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms