RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 OCR1Q9BZK8 76 aa7.2□□□□□ -1.26
LINC00339-207ENST00000634712 SCGB1A1P11684 91 aa7.2□□□□□ -1.26
LINC00339-207ENST00000634712 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
LINC00339-207ENST00000634712 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.18□□□□□ -1.26
LINC00339-207ENST00000634712 A8MUN3 132 aa7.16□□□□□ -1.26
LINC00339-207ENST00000634712 NDUFC1O43677 76 aa7.16□□□□□ -1.26
LINC00339-207ENST00000634712 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
LINC00339-207ENST00000634712 KLKP1Q107X0 134 aa7.15□□□□□ -1.26
LINC00339-207ENST00000634712 H3BPC8 53 aa7.12□□□□□ -1.27
LINC00339-207ENST00000634712 IMUPQ9GZP8 106 aa7.11□□□□□ -1.27
LINC00339-207ENST00000634712 K7ERU9 68 aa7.09□□□□□ -1.27
LINC00339-207ENST00000634712 KRTAP9-7A8MTY7 169 aa7.08□□□□□ -1.28
LINC00339-207ENST00000634712 SPRR2GQ9BYE4 73 aa7.06□□□□□ -1.28
LINC00339-207ENST00000634712 Q5VV11 94 aa7.05□□□□□ -1.28
LINC00339-207ENST00000634712 CRIPTQ9P021 101 aa7.04□□□□□ -1.28
LINC00339-207ENST00000634712 MT-ATP8P03928 68 aa7.03□□□□□ -1.28
LINC00339-207ENST00000634712 H0YAA0 97 aa7.01□□□□□ -1.29
LINC00339-207ENST00000634712 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
LINC00339-207ENST00000634712 SMIM20Q8N5G0 67 aa6.99□□□□□ -1.29
LINC00339-207ENST00000634712 MT1BP07438 61 aa6.97□□□□□ -1.29
LINC00339-207ENST00000634712 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
LINC00339-207ENST00000634712 MACF1Q9UPN3 7388 aaKnown RBP6.97□□□□□ -1.29
LINC00339-207ENST00000634712 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
LINC00339-207ENST00000634712 TRAV7A0A075B6U4 112 aa6.95□□□□□ -1.3
LINC00339-207ENST00000634712 A6NN06 94 aa6.94□□□□□ -1.3
LINC00339-207ENST00000634712 SYNE2Q8WXH0 6885 aaKnown RBP6.88□□□□□ -1.31
LINC00339-207ENST00000634712 ACYP2P14621 99 aa6.87□□□□□ -1.31
LINC00339-207ENST00000634712 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
LINC00339-207ENST00000634712 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
LINC00339-207ENST00000634712 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
LINC00339-207ENST00000634712 SNURFQ9Y675 71 aa6.81□□□□□ -1.32
LINC00339-207ENST00000634712 R4GN34 69 aa6.81□□□□□ -1.32
LINC00339-207ENST00000634712 SPTSSBQ8NFR3 76 aa6.8□□□□□ -1.32
LINC00339-207ENST00000634712 P0C880 135 aa6.79□□□□□ -1.32
LINC00339-207ENST00000634712 CHKB-CPT1BH3BT56 60 aa6.77□□□□□ -1.33
LINC00339-207ENST00000634712 M0QZ58 72 aa6.75□□□□□ -1.33
LINC00339-207ENST00000634712 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
LINC00339-207ENST00000634712 SERP2Q8N6R1 65 aa6.75□□□□□ -1.33
LINC00339-207ENST00000634712 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
LINC00339-207ENST00000634712 SPANXA2-OT1Q8N9U9 137 aa6.69□□□□□ -1.34
LINC00339-207ENST00000634712 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
LINC00339-207ENST00000634712 LINC01554Q52M75 96 aa6.67□□□□□ -1.34
LINC00339-207ENST00000634712 H3BS24 57 aa6.6□□□□□ -1.35
LINC00339-207ENST00000634712 MT1XP80297 61 aa6.57□□□□□ -1.36
LINC00339-207ENST00000634712 COX7CP15954 63 aa6.56□□□□□ -1.36
LINC00339-207ENST00000634712 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
LINC00339-207ENST00000634712 COA5Q86WW8 74 aa6.51□□□□□ -1.37
LINC00339-207ENST00000634712 KRTAP4-12Q9BQ66 201 aa6.47□□□□□ -1.37
LINC00339-207ENST00000634712 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.37
LINC00339-207ENST00000634712 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
LINC00339-207ENST00000634712 SEC61GP60059 68 aa6.44□□□□□ -1.38
LINC00339-207ENST00000634712 NEBP20929 6669 aa6.43□□□□□ -1.38
LINC00339-207ENST00000634712 H7BZZ5 65 aa6.42□□□□□ -1.38
LINC00339-207ENST00000634712 SERP1Q9Y6X1 66 aa6.42□□□□□ -1.38
LINC00339-207ENST00000634712 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
LINC00339-207ENST00000634712 KMT2DO14686 5537 aa6.4□□□□□ -1.38
LINC00339-207ENST00000634712 ANAPC13Q9BS18 74 aa6.4□□□□□ -1.39
LINC00339-207ENST00000634712 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
LINC00339-207ENST00000634712 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
LINC00339-207ENST00000634712 KRTAP13-4Q3LI77 160 aa6.35□□□□□ -1.39
LINC00339-207ENST00000634712 KRTAP9-9Q9BYP9 154 aa6.35□□□□□ -1.39
LINC00339-207ENST00000634712 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
LINC00339-207ENST00000634712 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.39
LINC00339-207ENST00000634712 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
LINC00339-207ENST00000634712 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
LINC00339-207ENST00000634712 CAMK2N1Q7Z7J9 78 aa6.3□□□□□ -1.4
LINC00339-207ENST00000634712 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
LINC00339-207ENST00000634712 A0A1B0GU33 70 aa6.27□□□□□ -1.41
LINC00339-207ENST00000634712 A0A0D9SG42 100 aa6.25□□□□□ -1.41
LINC00339-207ENST00000634712 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
LINC00339-207ENST00000634712 CCDC179H3BU77 68 aa6.23□□□□□ -1.41
LINC00339-207ENST00000634712 SPRR2EP22531 72 aa6.23□□□□□ -1.41
LINC00339-207ENST00000634712 SPRR2BP35325 72 aa6.23□□□□□ -1.41
LINC00339-207ENST00000634712 SPRR2AP35326 72 aa6.23□□□□□ -1.41
LINC00339-207ENST00000634712 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
LINC00339-207ENST00000634712 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
LINC00339-207ENST00000634712 A0A1B0GU69 56 aa6.21□□□□□ -1.41
LINC00339-207ENST00000634712 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
LINC00339-207ENST00000634712 ATP5EP56381 51 aaPredicted RBP6.17□□□□□ -1.42
LINC00339-207ENST00000634712 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
LINC00339-207ENST00000634712 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
LINC00339-207ENST00000634712 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
LINC00339-207ENST00000634712 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
LINC00339-207ENST00000634712 LCE1DQ5T752 114 aa6.1□□□□□ -1.43
LINC00339-207ENST00000634712 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
LINC00339-207ENST00000634712 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
LINC00339-207ENST00000634712 KRTAP12-1P59990 96 aa6.07□□□□□ -1.44
LINC00339-207ENST00000634712 SPRR2DP22532 72 aa6.03□□□□□ -1.44
LINC00339-207ENST00000634712 TMEM258P61165 79 aa6.02□□□□□ -1.45
LINC00339-207ENST00000634712 A8MU10 97 aa6.01□□□□□ -1.45
LINC00339-207ENST00000634712 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
LINC00339-207ENST00000634712 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
LINC00339-207ENST00000634712 KRTAP2-2Q9BYT5 123 aa5.92□□□□□ -1.46
LINC00339-207ENST00000634712 KRTAP2-1Q9BYU5 128 aa5.92□□□□□ -1.46
LINC00339-207ENST00000634712 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.47
LINC00339-207ENST00000634712 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
LINC00339-207ENST00000634712 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
LINC00339-207ENST00000634712 UQCR11O14957 56 aa5.85□□□□□ -1.47
LINC00339-207ENST00000634712 KRTAP4-2Q9BYR5 136 aa5.84□□□□□ -1.47
LINC00339-207ENST00000634712 MT1EP04732 61 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 590.1 ms