RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
CIRBP-246ENST00000628979 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.42□□□□□ -0.9
CIRBP-246ENST00000628979 KRTAP19-6Q3LI70 58 aa9.4□□□□□ -0.9
CIRBP-246ENST00000628979 NDUFC1O43677 76 aa9.37□□□□□ -0.91
CIRBP-246ENST00000628979 A8MUN3 132 aa9.36□□□□□ -0.91
CIRBP-246ENST00000628979 H3BPC8 53 aa9.32□□□□□ -0.92
CIRBP-246ENST00000628979 MT-ATP8P03928 68 aa9.31□□□□□ -0.92
CIRBP-246ENST00000628979 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
CIRBP-246ENST00000628979 KRTAP9-7A8MTY7 169 aa9.27□□□□□ -0.93
CIRBP-246ENST00000628979 SPRR2GQ9BYE4 73 aa9.27□□□□□ -0.93
CIRBP-246ENST00000628979 Q5VV11 94 aa9.24□□□□□ -0.93
CIRBP-246ENST00000628979 MT1BP07438 61 aa9.2□□□□□ -0.94
CIRBP-246ENST00000628979 KRTAP19-8Q3LI54 63 aa9.19□□□□□ -0.94
CIRBP-246ENST00000628979 CRIPTQ9P021 101 aa9.19□□□□□ -0.94
CIRBP-246ENST00000628979 H0YAA0 97 aa9.17□□□□□ -0.94
CIRBP-246ENST00000628979 ADM2Q7Z4H4 148 aa9.17□□□□□ -0.94
CIRBP-246ENST00000628979 DMAC1Q96GE9 116 aa9.15□□□□□ -0.94
CIRBP-246ENST00000628979 TRAV7A0A075B6U4 112 aa9.14□□□□□ -0.95
CIRBP-246ENST00000628979 SMIM20Q8N5G0 67 aa9.14□□□□□ -0.95
CIRBP-246ENST00000628979 A6NN06 94 aa9.08□□□□□ -0.96
CIRBP-246ENST00000628979 MACF1Q9UPN3 7388 aaKnown RBP9.02□□□□□ -0.97
CIRBP-246ENST00000628979 SNURFQ9Y675 71 aa9□□□□□ -0.97
CIRBP-246ENST00000628979 ACYP2P14621 99 aa8.99□□□□□ -0.97
CIRBP-246ENST00000628979 P0C880 135 aa8.96□□□□□ -0.98
CIRBP-246ENST00000628979 KRTAP10-5P60370 271 aa8.96□□□□□ -0.98
CIRBP-246ENST00000628979 C20orf197Q8N268 126 aa8.93□□□□□ -0.98
CIRBP-246ENST00000628979 R4GN34 69 aa8.92□□□□□ -0.98
CIRBP-246ENST00000628979 SYNE2Q8WXH0 6885 aaKnown RBP8.92□□□□□ -0.98
CIRBP-246ENST00000628979 SERP2Q8N6R1 65 aa8.88□□□□□ -0.99
CIRBP-246ENST00000628979 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
CIRBP-246ENST00000628979 CHKB-CPT1BH3BT56 60 aa8.87□□□□□ -0.99
CIRBP-246ENST00000628979 M0QZ58 72 aa8.86□□□□□ -0.99
CIRBP-246ENST00000628979 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
CIRBP-246ENST00000628979 KRTAP6-3Q3LI67 103 aa8.85□□□□□ -0.99
CIRBP-246ENST00000628979 PLAC4Q8WY50 150 aa8.82□□□□□ -1
CIRBP-246ENST00000628979 SPANXA2-OT1Q8N9U9 137 aa8.78□□□□□ -1
CIRBP-246ENST00000628979 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
CIRBP-246ENST00000628979 PCP4P48539 62 aa8.74□□□□□ -1.01
CIRBP-246ENST00000628979 SVIPQ8NHG7 77 aa8.72□□□□□ -1.01
CIRBP-246ENST00000628979 PRO2289Q9P1D8 64 aa8.7□□□□□ -1.02
CIRBP-246ENST00000628979 MT1XP80297 61 aa8.67□□□□□ -1.02
CIRBP-246ENST00000628979 ANAPC13Q9BS18 74 aa8.67□□□□□ -1.02
CIRBP-246ENST00000628979 COX7CP15954 63 aa8.65□□□□□ -1.02
CIRBP-246ENST00000628979 COA5Q86WW8 74 aa8.58□□□□□ -1.04
CIRBP-246ENST00000628979 CYSTM1Q9H1C7 97 aa8.5□□□□□ -1.05
CIRBP-246ENST00000628979 H7BZZ5 65 aa8.47□□□□□ -1.05
CIRBP-246ENST00000628979 KRTAP5-9P26371 169 aa8.47□□□□□ -1.05
CIRBP-246ENST00000628979 MUC12Q9UKN1 5478 aa8.45□□□□□ -1.06
CIRBP-246ENST00000628979 KMT2DO14686 5537 aa8.43□□□□□ -1.06
CIRBP-246ENST00000628979 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
CIRBP-246ENST00000628979 SEC61GP60059 68 aa8.4□□□□□ -1.06
CIRBP-246ENST00000628979 CCDC179H3BU77 68 aa8.39□□□□□ -1.07
CIRBP-246ENST00000628979 KRTAP12-2P59991 146 aa8.39□□□□□ -1.07
CIRBP-246ENST00000628979 SERP1Q9Y6X1 66 aa8.39□□□□□ -1.07
CIRBP-246ENST00000628979 NEBP20929 6669 aa8.36□□□□□ -1.07
CIRBP-246ENST00000628979 KRTAP8-1Q8IUC2 63 aa8.35□□□□□ -1.07
CIRBP-246ENST00000628979 SPRR2FQ96RM1 72 aa8.34□□□□□ -1.07
CIRBP-246ENST00000628979 KRTAP10-7P60409 375 aaPredicted RBP8.3□□□□□ -1.08
CIRBP-246ENST00000628979 KRTAP4-8A0A0G2JLE6 195 aa8.28□□□□□ -1.08
CIRBP-246ENST00000628979 KRTAP4-8Q9BYQ9 185 aa8.28□□□□□ -1.08
CIRBP-246ENST00000628979 TMEM258P61165 79 aa8.26□□□□□ -1.09
CIRBP-246ENST00000628979 A0A0D9SG42 100 aa8.25□□□□□ -1.09
CIRBP-246ENST00000628979 CAMK2N1Q7Z7J9 78 aa8.25□□□□□ -1.09
CIRBP-246ENST00000628979 MDN1Q9NU22 5596 aa8.24□□□□□ -1.09
CIRBP-246ENST00000628979 SPATA8Q6RVD6 105 aa8.23□□□□□ -1.09
CIRBP-246ENST00000628979 A0A1B0GU33 70 aa8.22□□□□□ -1.09
CIRBP-246ENST00000628979 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
CIRBP-246ENST00000628979 ATP5EP56381 51 aaPredicted RBP8.21□□□□□ -1.1
CIRBP-246ENST00000628979 SPRR2EP22531 72 aa8.18□□□□□ -1.1
CIRBP-246ENST00000628979 SPRR2BP35325 72 aa8.18□□□□□ -1.1
CIRBP-246ENST00000628979 SPRR2AP35326 72 aa8.18□□□□□ -1.1
CIRBP-246ENST00000628979 KRTAP20-1Q3LI63 56 aa8.16□□□□□ -1.1
CIRBP-246ENST00000628979 A0A1B0GU69 56 aa8.15□□□□□ -1.1
CIRBP-246ENST00000628979 SPINT4Q6UDR6 99 aa8.12□□□□□ -1.11
CIRBP-246ENST00000628979 RPS28P62857 69 aaKnown RBP8.08□□□□□ -1.12
CIRBP-246ENST00000628979 LCE1AQ5T7P2 110 aa8.05□□□□□ -1.12
CIRBP-246ENST00000628979 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
CIRBP-246ENST00000628979 SMIM26A0A096LP01 95 aa7.99□□□□□ -1.13
CIRBP-246ENST00000628979 KRTAP2-3P0C7H8 128 aa7.97□□□□□ -1.13
CIRBP-246ENST00000628979 KRTAP2-4Q9BYR9 128 aa7.97□□□□□ -1.13
CIRBP-246ENST00000628979 A8MU10 97 aa7.96□□□□□ -1.14
CIRBP-246ENST00000628979 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
CIRBP-246ENST00000628979 SPRR2DP22532 72 aa7.91□□□□□ -1.14
CIRBP-246ENST00000628979 LINC01558Q9Y6Z2 57 aa7.87□□□□□ -1.15
CIRBP-246ENST00000628979 KRTAP19-7Q3SYF9 63 aa7.73□□□□□ -1.17
CIRBP-246ENST00000628979 KRTAP2-2Q9BYT5 123 aa7.73□□□□□ -1.17
CIRBP-246ENST00000628979 KRTAP2-1Q9BYU5 128 aa7.73□□□□□ -1.17
CIRBP-246ENST00000628979 V9GYY9 64 aa7.71□□□□□ -1.18
CIRBP-246ENST00000628979 UQCR11O14957 56 aa7.67□□□□□ -1.18
CIRBP-246ENST00000628979 MT1EP04732 61 aa7.67□□□□□ -1.18
CIRBP-246ENST00000628979 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
CIRBP-246ENST00000628979 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
CIRBP-246ENST00000628979 Q1T7F1 81 aa7.64□□□□□ -1.19
CIRBP-246ENST00000628979 KRTAP19-5Q3LI72 72 aa7.63□□□□□ -1.19
CIRBP-246ENST00000628979 TNP1P09430 55 aa7.61□□□□□ -1.19
CIRBP-246ENST00000628979 KRTAP19-3Q7Z4W3 81 aa7.58□□□□□ -1.2
CIRBP-246ENST00000628979 LCE5AQ5TCM9 118 aa7.55□□□□□ -1.2
CIRBP-246ENST00000628979 LCE3AQ5TA76 89 aa7.53□□□□□ -1.2
CIRBP-246ENST00000628979 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.21
CIRBP-246ENST00000628979 PSPHP1O15172 72 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms