RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 UQCR11O14957 56 aa6.73□□□□□ -1.33
SYNGAP1-207ENST00000628646 TNXBP22105 4242 aa6.73□□□□□ -1.33
SYNGAP1-207ENST00000628646 SPINK7P58062 85 aa6.73□□□□□ -1.33
SYNGAP1-207ENST00000628646 MYCBP2O75592 4640 aa6.72□□□□□ -1.33
SYNGAP1-207ENST00000628646 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
SYNGAP1-207ENST00000628646 A8MUU9 505 aa6.7□□□□□ -1.34
SYNGAP1-207ENST00000628646 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
SYNGAP1-207ENST00000628646 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
SYNGAP1-207ENST00000628646 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
SYNGAP1-207ENST00000628646 M0R2T5 61 aa6.67□□□□□ -1.34
SYNGAP1-207ENST00000628646 FAT3Q8TDW7 4589 aa6.66□□□□□ -1.34
SYNGAP1-207ENST00000628646 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
SYNGAP1-207ENST00000628646 MIR22HGQ0VDD5 57 aa6.64□□□□□ -1.35
SYNGAP1-207ENST00000628646 A0A0D9SG42 100 aa6.59□□□□□ -1.35
SYNGAP1-207ENST00000628646 A0A0A0MQY5 61 aa6.59□□□□□ -1.35
SYNGAP1-207ENST00000628646 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.36
SYNGAP1-207ENST00000628646 A6NN06 94 aa6.53□□□□□ -1.36
SYNGAP1-207ENST00000628646 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
SYNGAP1-207ENST00000628646 A0A1B0GU33 70 aa6.5□□□□□ -1.37
SYNGAP1-207ENST00000628646 PCLOQ9Y6V0 5065 aa6.49□□□□□ -1.37
SYNGAP1-207ENST00000628646 S4R3F8 94 aa6.47□□□□□ -1.37
SYNGAP1-207ENST00000628646 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.37
SYNGAP1-207ENST00000628646 CRIPTQ9P021 101 aa6.46□□□□□ -1.37
SYNGAP1-207ENST00000628646 SPATA8Q6RVD6 105 aa6.44□□□□□ -1.38
SYNGAP1-207ENST00000628646 H1FX-AS1Q4G0G2 97 aa6.39□□□□□ -1.39
SYNGAP1-207ENST00000628646 HERC1Q15751 4861 aa6.36□□□□□ -1.39
SYNGAP1-207ENST00000628646 LPAP08519 4548 aa6.36□□□□□ -1.39
SYNGAP1-207ENST00000628646 LRP2P98164 4655 aa6.34□□□□□ -1.39
SYNGAP1-207ENST00000628646 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
SYNGAP1-207ENST00000628646 H0YAA0 97 aa6.21□□□□□ -1.42
SYNGAP1-207ENST00000628646 NDUFAF8A1L188 74 aa6.2□□□□□ -1.42
SYNGAP1-207ENST00000628646 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
SYNGAP1-207ENST00000628646 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
SYNGAP1-207ENST00000628646 ROMO1P60602 79 aa6.18□□□□□ -1.42
SYNGAP1-207ENST00000628646 M0QZ58 72 aa6.14□□□□□ -1.43
SYNGAP1-207ENST00000628646 R4GN34 69 aa6.13□□□□□ -1.43
SYNGAP1-207ENST00000628646 HMCN2Q8NDA2 5059 aa6.11□□□□□ -1.43
SYNGAP1-207ENST00000628646 KRTAP10-6P60371 365 aaPredicted RBP6.1□□□□□ -1.43
SYNGAP1-207ENST00000628646 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
SYNGAP1-207ENST00000628646 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
SYNGAP1-207ENST00000628646 MUC17Q685J3 4493 aa6.07□□□□□ -1.44
SYNGAP1-207ENST00000628646 UBR4Q5T4S7 5183 aa6.05□□□□□ -1.44
SYNGAP1-207ENST00000628646 LUZP6Q538Z0 58 aa6.05□□□□□ -1.44
SYNGAP1-207ENST00000628646 KRTAP13-4Q3LI77 160 aa6.02□□□□□ -1.45
SYNGAP1-207ENST00000628646 RNF213Q63HN8 5207 aa5.98□□□□□ -1.45
SYNGAP1-207ENST00000628646 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
SYNGAP1-207ENST00000628646 P0C880 135 aa5.96□□□□□ -1.45
SYNGAP1-207ENST00000628646 MT1HP80294 61 aa5.91□□□□□ -1.46
SYNGAP1-207ENST00000628646 MUC2Q02817 5179 aa5.86□□□□□ -1.47
SYNGAP1-207ENST00000628646 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
SYNGAP1-207ENST00000628646 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
SYNGAP1-207ENST00000628646 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
SYNGAP1-207ENST00000628646 LCE2CQ5TA81 110 aa5.77□□□□□ -1.49
SYNGAP1-207ENST00000628646 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
SYNGAP1-207ENST00000628646 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
SYNGAP1-207ENST00000628646 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
SYNGAP1-207ENST00000628646 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
SYNGAP1-207ENST00000628646 MT2AP02795 61 aa5.66□□□□□ -1.5
SYNGAP1-207ENST00000628646 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
SYNGAP1-207ENST00000628646 MT1FP04733 61 aa5.61□□□□□ -1.51
SYNGAP1-207ENST00000628646 TNP1P09430 55 aa5.59□□□□□ -1.52
SYNGAP1-207ENST00000628646 PP632Q6XCG6 107 aa5.59□□□□□ -1.52
SYNGAP1-207ENST00000628646 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
SYNGAP1-207ENST00000628646 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
SYNGAP1-207ENST00000628646 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
SYNGAP1-207ENST00000628646 FSIP2Q5CZC0 6907 aa5.44□□□□□ -1.54
SYNGAP1-207ENST00000628646 SPRR2GQ9BYE4 73 aa5.37□□□□□ -1.55
SYNGAP1-207ENST00000628646 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
SYNGAP1-207ENST00000628646 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
SYNGAP1-207ENST00000628646 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.56
SYNGAP1-207ENST00000628646 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
SYNGAP1-207ENST00000628646 LCE2BO14633 110 aa5.26□□□□□ -1.57
SYNGAP1-207ENST00000628646 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
SYNGAP1-207ENST00000628646 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
SYNGAP1-207ENST00000628646 LCE2DQ5TA82 110 aaPredicted RBP5.2□□□□□ -1.58
SYNGAP1-207ENST00000628646 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
SYNGAP1-207ENST00000628646 MT1BP07438 61 aa5.17□□□□□ -1.58
SYNGAP1-207ENST00000628646 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
SYNGAP1-207ENST00000628646 KRTAP10-5P60370 271 aa5.03□□□□□ -1.6
SYNGAP1-207ENST00000628646 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
SYNGAP1-207ENST00000628646 USH2AO75445 5202 aa5.02□□□□□ -1.61
SYNGAP1-207ENST00000628646 MT1XP80297 61 aa4.99□□□□□ -1.61
SYNGAP1-207ENST00000628646 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
SYNGAP1-207ENST00000628646 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
SYNGAP1-207ENST00000628646 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
SYNGAP1-207ENST00000628646 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
SYNGAP1-207ENST00000628646 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.62
SYNGAP1-207ENST00000628646 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
SYNGAP1-207ENST00000628646 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
SYNGAP1-207ENST00000628646 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
SYNGAP1-207ENST00000628646 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
SYNGAP1-207ENST00000628646 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
SYNGAP1-207ENST00000628646 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
SYNGAP1-207ENST00000628646 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
SYNGAP1-207ENST00000628646 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
SYNGAP1-207ENST00000628646 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
SYNGAP1-207ENST00000628646 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
SYNGAP1-207ENST00000628646 KMT2DO14686 5537 aa4.64□□□□□ -1.67
SYNGAP1-207ENST00000628646 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
SYNGAP1-207ENST00000628646 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 1073.4 ms