RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 H3BPC8 53 aa6.29□□□□□ -1.4
SOX2-OT-246ENST00000628343 FAM236AA0A1B0GUQ0 79 aa6.28□□□□□ -1.4
SOX2-OT-246ENST00000628343 FAM236BA0A1B0GV22 79 aa6.28□□□□□ -1.4
SOX2-OT-246ENST00000628343 A8MUN3 132 aa6.26□□□□□ -1.41
SOX2-OT-246ENST00000628343 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
SOX2-OT-246ENST00000628343 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
SOX2-OT-246ENST00000628343 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.42
SOX2-OT-246ENST00000628343 NDUFC1O43677 76 aa6.19□□□□□ -1.42
SOX2-OT-246ENST00000628343 KRTAP19-1Q8IUB9 90 aa6.19□□□□□ -1.42
SOX2-OT-246ENST00000628343 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
SOX2-OT-246ENST00000628343 H0YAA0 97 aa6.12□□□□□ -1.43
SOX2-OT-246ENST00000628343 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
SOX2-OT-246ENST00000628343 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
SOX2-OT-246ENST00000628343 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
SOX2-OT-246ENST00000628343 FCGBPQ9Y6R7 5405 aaPredicted RBP6.08□□□□□ -1.44
SOX2-OT-246ENST00000628343 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
SOX2-OT-246ENST00000628343 MT1BP07438 61 aa6.05□□□□□ -1.44
SOX2-OT-246ENST00000628343 KRTAP19-8Q3LI54 63 aa6.05□□□□□ -1.44
SOX2-OT-246ENST00000628343 ADM2Q7Z4H4 148 aa6.05□□□□□ -1.44
SOX2-OT-246ENST00000628343 C20orf197Q8N268 126 aa6.05□□□□□ -1.44
SOX2-OT-246ENST00000628343 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
SOX2-OT-246ENST00000628343 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
SOX2-OT-246ENST00000628343 ACYP2P14621 99 aa6.02□□□□□ -1.45
SOX2-OT-246ENST00000628343 Q5VV11 94 aa6.02□□□□□ -1.45
SOX2-OT-246ENST00000628343 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
SOX2-OT-246ENST00000628343 SPANXA2-OT1Q8N9U9 137 aa5.97□□□□□ -1.45
SOX2-OT-246ENST00000628343 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
SOX2-OT-246ENST00000628343 P0C880 135 aa5.96□□□□□ -1.46
SOX2-OT-246ENST00000628343 COX7CP15954 63 aa5.93□□□□□ -1.46
SOX2-OT-246ENST00000628343 CHKB-CPT1BH3BT56 60 aa5.91□□□□□ -1.46
SOX2-OT-246ENST00000628343 SPTSSBQ8NFR3 76 aa5.9□□□□□ -1.46
SOX2-OT-246ENST00000628343 A6NN06 94 aa5.88□□□□□ -1.47
SOX2-OT-246ENST00000628343 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
SOX2-OT-246ENST00000628343 CYSTM1Q9H1C7 97 aa5.87□□□□□ -1.47
SOX2-OT-246ENST00000628343 R4GN34 69 aa5.87□□□□□ -1.47
SOX2-OT-246ENST00000628343 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
SOX2-OT-246ENST00000628343 M0QZ58 72 aa5.84□□□□□ -1.47
SOX2-OT-246ENST00000628343 H7BZZ5 65 aa5.83□□□□□ -1.48
SOX2-OT-246ENST00000628343 COA5Q86WW8 74 aa5.81□□□□□ -1.48
SOX2-OT-246ENST00000628343 ANAPC13Q9BS18 74 aa5.81□□□□□ -1.48
SOX2-OT-246ENST00000628343 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
SOX2-OT-246ENST00000628343 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
SOX2-OT-246ENST00000628343 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
SOX2-OT-246ENST00000628343 CCDC179H3BU77 68 aa5.72□□□□□ -1.49
SOX2-OT-246ENST00000628343 MT1XP80297 61 aa5.72□□□□□ -1.49
SOX2-OT-246ENST00000628343 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-246ENST00000628343 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
SOX2-OT-246ENST00000628343 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
SOX2-OT-246ENST00000628343 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
SOX2-OT-246ENST00000628343 SEC61GP60059 68 aa5.59□□□□□ -1.51
SOX2-OT-246ENST00000628343 SERP1Q9Y6X1 66 aa5.59□□□□□ -1.51
SOX2-OT-246ENST00000628343 ATP5EP56381 51 aaPredicted RBP5.56□□□□□ -1.52
SOX2-OT-246ENST00000628343 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
SOX2-OT-246ENST00000628343 A0A1B0GU33 70 aa5.51□□□□□ -1.53
SOX2-OT-246ENST00000628343 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
SOX2-OT-246ENST00000628343 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
SOX2-OT-246ENST00000628343 TMEM258P61165 79 aa5.49□□□□□ -1.53
SOX2-OT-246ENST00000628343 A0A1B0GU69 56 aa5.48□□□□□ -1.53
SOX2-OT-246ENST00000628343 A0A0D9SG42 100 aa5.47□□□□□ -1.53
SOX2-OT-246ENST00000628343 KMT2DO14686 5537 aa5.47□□□□□ -1.53
SOX2-OT-246ENST00000628343 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
SOX2-OT-246ENST00000628343 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
SOX2-OT-246ENST00000628343 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
SOX2-OT-246ENST00000628343 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
SOX2-OT-246ENST00000628343 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
SOX2-OT-246ENST00000628343 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
SOX2-OT-246ENST00000628343 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
SOX2-OT-246ENST00000628343 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
SOX2-OT-246ENST00000628343 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
SOX2-OT-246ENST00000628343 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
SOX2-OT-246ENST00000628343 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
SOX2-OT-246ENST00000628343 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
SOX2-OT-246ENST00000628343 SMIM26A0A096LP01 95 aa5.34□□□□□ -1.55
SOX2-OT-246ENST00000628343 A8MU10 97 aa5.34□□□□□ -1.55
SOX2-OT-246ENST00000628343 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
SOX2-OT-246ENST00000628343 NEBP20929 6669 aa5.32□□□□□ -1.56
SOX2-OT-246ENST00000628343 SPRR2EP22531 72 aa5.25□□□□□ -1.57
SOX2-OT-246ENST00000628343 SPRR2BP35325 72 aa5.25□□□□□ -1.57
SOX2-OT-246ENST00000628343 SPRR2AP35326 72 aa5.25□□□□□ -1.57
SOX2-OT-246ENST00000628343 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
SOX2-OT-246ENST00000628343 UQCR11O14957 56 aa5.19□□□□□ -1.58
SOX2-OT-246ENST00000628343 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
SOX2-OT-246ENST00000628343 PCP4P48539 62 aa5.13□□□□□ -1.59
SOX2-OT-246ENST00000628343 Q1T7F1 81 aa5.13□□□□□ -1.59
SOX2-OT-246ENST00000628343 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
SOX2-OT-246ENST00000628343 V9GYY9 64 aa5.13□□□□□ -1.59
SOX2-OT-246ENST00000628343 PSPHP1O15172 72 aa5.12□□□□□ -1.59
SOX2-OT-246ENST00000628343 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
SOX2-OT-246ENST00000628343 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
SOX2-OT-246ENST00000628343 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
SOX2-OT-246ENST00000628343 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
SOX2-OT-246ENST00000628343 SPRR2DP22532 72 aa5.07□□□□□ -1.6
SOX2-OT-246ENST00000628343 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
SOX2-OT-246ENST00000628343 KRTAP9-9Q9BYP9 154 aa5.06□□□□□ -1.6
SOX2-OT-246ENST00000628343 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
SOX2-OT-246ENST00000628343 MT1EP04732 61 aa5.05□□□□□ -1.6
SOX2-OT-246ENST00000628343 KRTAP4-12Q9BQ66 201 aa5.05□□□□□ -1.6
SOX2-OT-246ENST00000628343 TNP1P09430 55 aa5.04□□□□□ -1.6
SOX2-OT-246ENST00000628343 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
SOX2-OT-246ENST00000628343 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms