RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 FAT4Q6V0I7 4981 aa5.19□□□□□ -1.58
PDLIM5-223ENST00000627587 IGLV7-46A0A075B6I9 117 aa5.19□□□□□ -1.58
PDLIM5-223ENST00000627587 LINC00208Q96KT6 92 aa5.19□□□□□ -1.58
PDLIM5-223ENST00000627587 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
PDLIM5-223ENST00000627587 NDUFC1O43677 76 aa5.17□□□□□ -1.58
PDLIM5-223ENST00000627587 Q5W150 140 aa5.17□□□□□ -1.58
PDLIM5-223ENST00000627587 ZCCHC13Q8WW36 166 aaKnown RBP5.17□□□□□ -1.58
PDLIM5-223ENST00000627587 C1orf64Q8NEQ6 169 aa5.16□□□□□ -1.58
PDLIM5-223ENST00000627587 TPRXLQ17RH7 258 aa5.15□□□□□ -1.58
PDLIM5-223ENST00000627587 C20orf166-AS1Q96NR2 134 aa5.15□□□□□ -1.58
PDLIM5-223ENST00000627587 A8MUU9 505 aa5.15□□□□□ -1.59
PDLIM5-223ENST00000627587 H7BZZ5 65 aa5.15□□□□□ -1.59
PDLIM5-223ENST00000627587 LOC101927531A0A1B0GV80 90 aa5.12□□□□□ -1.59
PDLIM5-223ENST00000627587 Q75L30 129 aa5.11□□□□□ -1.59
PDLIM5-223ENST00000627587 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
PDLIM5-223ENST00000627587 RBM12B-AS1Q9P1G2 102 aa5.1□□□□□ -1.59
PDLIM5-223ENST00000627587 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
PDLIM5-223ENST00000627587 PCOTHQ58A44 107 aa5.07□□□□□ -1.6
PDLIM5-223ENST00000627587 CYP4F30PQ9H0H9 118 aa5.07□□□□□ -1.6
PDLIM5-223ENST00000627587 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
PDLIM5-223ENST00000627587 RPL37P61927 97 aaKnown RBP5.07□□□□□ -1.6
PDLIM5-223ENST00000627587 IGKV2D-30A0A075B6S6 120 aa5.06□□□□□ -1.6
PDLIM5-223ENST00000627587 ATP11AUNQ6ZP68 121 aa5.06□□□□□ -1.6
PDLIM5-223ENST00000627587 C7orf65Q6ZTY9 151 aa5.05□□□□□ -1.6
PDLIM5-223ENST00000627587 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
PDLIM5-223ENST00000627587 SPANXA2-OT1Q8N9U9 137 aa5.04□□□□□ -1.6
PDLIM5-223ENST00000627587 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-223ENST00000627587 HRES1P13985 223 aa5□□□□□ -1.61
PDLIM5-223ENST00000627587 SPINK7P58062 85 aa4.99□□□□□ -1.61
PDLIM5-223ENST00000627587 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
PDLIM5-223ENST00000627587 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
PDLIM5-223ENST00000627587 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
PDLIM5-223ENST00000627587 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
PDLIM5-223ENST00000627587 LCA10Q71F78 164 aa4.92□□□□□ -1.62
PDLIM5-223ENST00000627587 ACYP2P14621 99 aa4.91□□□□□ -1.62
PDLIM5-223ENST00000627587 A8MUN3 132 aa4.89□□□□□ -1.63
PDLIM5-223ENST00000627587 Q1T7F1 81 aa4.89□□□□□ -1.63
PDLIM5-223ENST00000627587 COA5Q86WW8 74 aa4.89□□□□□ -1.63
PDLIM5-223ENST00000627587 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
PDLIM5-223ENST00000627587 MPLKIPQ8TAP9 179 aa4.88□□□□□ -1.63
PDLIM5-223ENST00000627587 KRTAP3-1Q9BYR8 98 aa4.88□□□□□ -1.63
PDLIM5-223ENST00000627587 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
PDLIM5-223ENST00000627587 COX6B2Q6YFQ2 88 aa4.86□□□□□ -1.63
PDLIM5-223ENST00000627587 CHKB-CPT1BH3BT56 60 aa4.84□□□□□ -1.63
PDLIM5-223ENST00000627587 MT1HP80294 61 aa4.82□□□□□ -1.64
PDLIM5-223ENST00000627587 A6NN06 94 aa4.81□□□□□ -1.64
PDLIM5-223ENST00000627587 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
PDLIM5-223ENST00000627587 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-223ENST00000627587 LINC01554Q52M75 96 aa4.76□□□□□ -1.65
PDLIM5-223ENST00000627587 M0R2T5 61 aa4.75□□□□□ -1.65
PDLIM5-223ENST00000627587 H1FX-AS1Q4G0G2 97 aa4.75□□□□□ -1.65
PDLIM5-223ENST00000627587 SPTSSBQ8NFR3 76 aa4.75□□□□□ -1.65
PDLIM5-223ENST00000627587 S4R3F8 94 aa4.72□□□□□ -1.65
PDLIM5-223ENST00000627587 PSPHP1O15172 72 aa4.69□□□□□ -1.66
PDLIM5-223ENST00000627587 Q5VV11 94 aa4.69□□□□□ -1.66
PDLIM5-223ENST00000627587 LINC01558Q9Y6Z2 57 aa4.69□□□□□ -1.66
PDLIM5-223ENST00000627587 PRR15LQ9BU68 103 aa4.66□□□□□ -1.66
PDLIM5-223ENST00000627587 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
PDLIM5-223ENST00000627587 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-223ENST00000627587 A8MU10 97 aa4.64□□□□□ -1.67
PDLIM5-223ENST00000627587 A0A1B0GU69 56 aa4.64□□□□□ -1.67
PDLIM5-223ENST00000627587 CSAG1Q6PB30 78 aa4.62□□□□□ -1.67
PDLIM5-223ENST00000627587 A6NED7 52 aa4.56□□□□□ -1.68
PDLIM5-223ENST00000627587 USH2AO75445 5202 aa4.56□□□□□ -1.68
PDLIM5-223ENST00000627587 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
PDLIM5-223ENST00000627587 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
PDLIM5-223ENST00000627587 H0YAA0 97 aa4.51□□□□□ -1.69
PDLIM5-223ENST00000627587 UQCR11O14957 56 aa4.5□□□□□ -1.69
PDLIM5-223ENST00000627587 ADM2Q7Z4H4 148 aa4.5□□□□□ -1.69
PDLIM5-223ENST00000627587 A0A1B0GU33 70 aa4.49□□□□□ -1.69
PDLIM5-223ENST00000627587 P0C880 135 aa4.47□□□□□ -1.69
PDLIM5-223ENST00000627587 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-223ENST00000627587 MT2AP02795 61 aa4.44□□□□□ -1.7
PDLIM5-223ENST00000627587 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
PDLIM5-223ENST00000627587 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
PDLIM5-223ENST00000627587 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
PDLIM5-223ENST00000627587 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
PDLIM5-223ENST00000627587 ROMO1P60602 79 aa4.41□□□□□ -1.7
PDLIM5-223ENST00000627587 MT1FP04733 61 aa4.39□□□□□ -1.71
PDLIM5-223ENST00000627587 M0QZ58 72 aa4.37□□□□□ -1.71
PDLIM5-223ENST00000627587 R4GN34 69 aa4.37□□□□□ -1.71
PDLIM5-223ENST00000627587 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
PDLIM5-223ENST00000627587 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
PDLIM5-223ENST00000627587 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
PDLIM5-223ENST00000627587 CRIPTQ9P021 101 aa4.32□□□□□ -1.72
PDLIM5-223ENST00000627587 A0A0D9SG42 100 aa4.31□□□□□ -1.72
PDLIM5-223ENST00000627587 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
PDLIM5-223ENST00000627587 K7ERS5 55 aa4.26□□□□□ -1.73
PDLIM5-223ENST00000627587 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
PDLIM5-223ENST00000627587 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
PDLIM5-223ENST00000627587 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
PDLIM5-223ENST00000627587 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
PDLIM5-223ENST00000627587 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
PDLIM5-223ENST00000627587 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
PDLIM5-223ENST00000627587 NEBP20929 6669 aa4.12□□□□□ -1.75
PDLIM5-223ENST00000627587 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
PDLIM5-223ENST00000627587 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
PDLIM5-223ENST00000627587 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
PDLIM5-223ENST00000627587 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
PDLIM5-223ENST00000627587 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms