RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 SPANXA2-OT1Q8N9U9 137 aa8.01□□□□□ -1.13
CCNA1-203ENST00000625767 NDUFC1O43677 76 aa8□□□□□ -1.13
CCNA1-203ENST00000625767 KRTAP10-6P60371 365 aaPredicted RBP7.99□□□□□ -1.13
CCNA1-203ENST00000625767 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
CCNA1-203ENST00000625767 ACYP2P14621 99 aa7.93□□□□□ -1.14
CCNA1-203ENST00000625767 PCP4P48539 62 aa7.91□□□□□ -1.14
CCNA1-203ENST00000625767 KRTAP9-8Q9BYQ0 159 aa7.89□□□□□ -1.15
CCNA1-203ENST00000625767 CSAG1Q6PB30 78 aa7.87□□□□□ -1.15
CCNA1-203ENST00000625767 MT2AP02795 61 aa7.83□□□□□ -1.16
CCNA1-203ENST00000625767 COA5Q86WW8 74 aa7.83□□□□□ -1.16
CCNA1-203ENST00000625767 CHKB-CPT1BH3BT56 60 aa7.8□□□□□ -1.16
CCNA1-203ENST00000625767 MT1FP04733 61 aa7.79□□□□□ -1.16
CCNA1-203ENST00000625767 TMEM258P61165 79 aa7.79□□□□□ -1.16
CCNA1-203ENST00000625767 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
CCNA1-203ENST00000625767 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
CCNA1-203ENST00000625767 ADM2Q7Z4H4 148 aa7.66□□□□□ -1.18
CCNA1-203ENST00000625767 SPTSSBQ8NFR3 76 aa7.66□□□□□ -1.18
CCNA1-203ENST00000625767 H0YAA0 97 aa7.63□□□□□ -1.19
CCNA1-203ENST00000625767 P0C880 135 aa7.61□□□□□ -1.19
CCNA1-203ENST00000625767 KRTAP9-3Q9BYQ3 159 aa7.61□□□□□ -1.19
CCNA1-203ENST00000625767 SERP1Q9Y6X1 66 aa7.55□□□□□ -1.2
CCNA1-203ENST00000625767 LCE2BO14633 110 aa7.51□□□□□ -1.21
CCNA1-203ENST00000625767 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
CCNA1-203ENST00000625767 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
CCNA1-203ENST00000625767 USH2AO75445 5202 aa7.47□□□□□ -1.21
CCNA1-203ENST00000625767 FSIP2Q5CZC0 6907 aa7.44□□□□□ -1.22
CCNA1-203ENST00000625767 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
CCNA1-203ENST00000625767 SVIPQ8NHG7 77 aa7.42□□□□□ -1.22
CCNA1-203ENST00000625767 CRIPTQ9P021 101 aa7.41□□□□□ -1.22
CCNA1-203ENST00000625767 SEC61GP60059 68 aa7.38□□□□□ -1.23
CCNA1-203ENST00000625767 R4GN34 69 aa7.38□□□□□ -1.23
CCNA1-203ENST00000625767 A0A1B0GU69 56 aa7.38□□□□□ -1.23
CCNA1-203ENST00000625767 M0QZ58 72 aa7.38□□□□□ -1.23
CCNA1-203ENST00000625767 LINC01558Q9Y6Z2 57 aa7.37□□□□□ -1.23
CCNA1-203ENST00000625767 KRTAP13-4Q3LI77 160 aa7.35□□□□□ -1.23
CCNA1-203ENST00000625767 RPS28P62857 69 aaKnown RBP7.32□□□□□ -1.24
CCNA1-203ENST00000625767 SSPOA2VEC9 5147 aa7.3□□□□□ -1.24
CCNA1-203ENST00000625767 KRTAP19-8Q3LI54 63 aa7.3□□□□□ -1.24
CCNA1-203ENST00000625767 SMIM26A0A096LP01 95 aa7.28□□□□□ -1.24
CCNA1-203ENST00000625767 MT1BP07438 61 aa7.28□□□□□ -1.24
CCNA1-203ENST00000625767 LINC01554Q52M75 96 aa7.28□□□□□ -1.24
CCNA1-203ENST00000625767 A0A1B0GU33 70 aa7.28□□□□□ -1.24
CCNA1-203ENST00000625767 SPATA8Q6RVD6 105 aa7.26□□□□□ -1.25
CCNA1-203ENST00000625767 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
CCNA1-203ENST00000625767 Q1T7F1 81 aa7.25□□□□□ -1.25
CCNA1-203ENST00000625767 Q5VV11 94 aa7.23□□□□□ -1.25
CCNA1-203ENST00000625767 PSPHP1O15172 72 aa7.22□□□□□ -1.25
CCNA1-203ENST00000625767 V9GYY9 64 aa7.19□□□□□ -1.26
CCNA1-203ENST00000625767 A0A0D9SG42 100 aa7.15□□□□□ -1.27
CCNA1-203ENST00000625767 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.27
CCNA1-203ENST00000625767 A8MU10 97 aa7.11□□□□□ -1.27
CCNA1-203ENST00000625767 KRTAP19-6Q3LI70 58 aa7.06□□□□□ -1.28
CCNA1-203ENST00000625767 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
CCNA1-203ENST00000625767 UQCR11O14957 56 aa7.06□□□□□ -1.28
CCNA1-203ENST00000625767 FCGBPQ9Y6R7 5405 aaPredicted RBP7.05□□□□□ -1.28
CCNA1-203ENST00000625767 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
CCNA1-203ENST00000625767 A6NN06 94 aa7.03□□□□□ -1.28
CCNA1-203ENST00000625767 KRTAP12-1P59990 96 aa7□□□□□ -1.29
CCNA1-203ENST00000625767 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
CCNA1-203ENST00000625767 SPINT4Q6UDR6 99 aa6.98□□□□□ -1.29
CCNA1-203ENST00000625767 MIR22HGQ0VDD5 57 aa6.97□□□□□ -1.29
CCNA1-203ENST00000625767 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
CCNA1-203ENST00000625767 MT1XP80297 61 aa6.96□□□□□ -1.3
CCNA1-203ENST00000625767 A6NED7 52 aa6.94□□□□□ -1.3
CCNA1-203ENST00000625767 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
CCNA1-203ENST00000625767 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
CCNA1-203ENST00000625767 MACF1Q9UPN3 7388 aaKnown RBP6.77□□□□□ -1.33
CCNA1-203ENST00000625767 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
CCNA1-203ENST00000625767 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
CCNA1-203ENST00000625767 CDC42SE1Q9NRR8 79 aa6.75□□□□□ -1.33
CCNA1-203ENST00000625767 KMT2DO14686 5537 aa6.73□□□□□ -1.33
CCNA1-203ENST00000625767 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
CCNA1-203ENST00000625767 C10orf95Q9H7T3 257 aa6.66□□□□□ -1.34
CCNA1-203ENST00000625767 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
CCNA1-203ENST00000625767 K7ERS5 55 aa6.65□□□□□ -1.35
CCNA1-203ENST00000625767 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
CCNA1-203ENST00000625767 BRK1Q8WUW1 75 aa6.61□□□□□ -1.35
CCNA1-203ENST00000625767 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
CCNA1-203ENST00000625767 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
CCNA1-203ENST00000625767 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
CCNA1-203ENST00000625767 TNP1P09430 55 aa6.45□□□□□ -1.38
CCNA1-203ENST00000625767 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
CCNA1-203ENST00000625767 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
CCNA1-203ENST00000625767 ROMO1P60602 79 aa6.38□□□□□ -1.39
CCNA1-203ENST00000625767 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
CCNA1-203ENST00000625767 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
CCNA1-203ENST00000625767 MUC12Q9UKN1 5478 aa6.33□□□□□ -1.4
CCNA1-203ENST00000625767 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
CCNA1-203ENST00000625767 KRTAP5-9P26371 169 aa6.29□□□□□ -1.4
CCNA1-203ENST00000625767 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
CCNA1-203ENST00000625767 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
CCNA1-203ENST00000625767 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
CCNA1-203ENST00000625767 KRTAP19-7Q3SYF9 63 aa6.22□□□□□ -1.41
CCNA1-203ENST00000625767 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
CCNA1-203ENST00000625767 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
CCNA1-203ENST00000625767 MT1EP04732 61 aa6.12□□□□□ -1.43
CCNA1-203ENST00000625767 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
CCNA1-203ENST00000625767 NEBP20929 6669 aa6.04□□□□□ -1.44
CCNA1-203ENST00000625767 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
CCNA1-203ENST00000625767 LCE1AQ5T7P2 110 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms