RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 KRTAP3-1Q9BYR8 98 aa10.4□□□□□ -0.74
PCDHB11-202ENST00000624887 XP32Q5T750 250 aa10.39□□□□□ -0.75
PCDHB11-202ENST00000624887 HERC2O95714 4834 aa10.37□□□□□ -0.75
PCDHB11-202ENST00000624887 COX6B2Q6YFQ2 88 aa10.32□□□□□ -0.76
PCDHB11-202ENST00000624887 ABCA13Q86UQ4 5058 aa10.31□□□□□ -0.76
PCDHB11-202ENST00000624887 UQCR11O14957 56 aa10.29□□□□□ -0.76
PCDHB11-202ENST00000624887 MIR22HGQ0VDD5 57 aa10.26□□□□□ -0.77
PCDHB11-202ENST00000624887 J3QL48 77 aa10.21□□□□□ -0.78
PCDHB11-202ENST00000624887 TPRXLQ17RH7 258 aa10.2□□□□□ -0.78
PCDHB11-202ENST00000624887 PRAC1Q96KF2 57 aa10.18□□□□□ -0.78
PCDHB11-202ENST00000624887 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
PCDHB11-202ENST00000624887 LINC01554Q52M75 96 aa10.08□□□□□ -0.8
PCDHB11-202ENST00000624887 LRP2P98164 4655 aa10.03□□□□□ -0.8
PCDHB11-202ENST00000624887 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
PCDHB11-202ENST00000624887 LPAP08519 4548 aa9.97□□□□□ -0.81
PCDHB11-202ENST00000624887 PCLOQ9Y6V0 5065 aa9.96□□□□□ -0.82
PCDHB11-202ENST00000624887 S4R3F8 94 aa9.95□□□□□ -0.82
PCDHB11-202ENST00000624887 A0A1B0GU33 70 aa9.93□□□□□ -0.82
PCDHB11-202ENST00000624887 H1FX-AS1Q4G0G2 97 aa9.92□□□□□ -0.82
PCDHB11-202ENST00000624887 CSAG1Q6PB30 78 aa9.9□□□□□ -0.82
PCDHB11-202ENST00000624887 H0YAA0 97 aa9.87□□□□□ -0.83
PCDHB11-202ENST00000624887 SEC61BP60468 96 aaKnown RBP9.82□□□□□ -0.84
PCDHB11-202ENST00000624887 KRTAP10-6P60371 365 aaPredicted RBP9.79□□□□□ -0.84
PCDHB11-202ENST00000624887 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
PCDHB11-202ENST00000624887 HERC1Q15751 4861 aa9.73□□□□□ -0.85
PCDHB11-202ENST00000624887 KRTAP25-1Q3LHN0 102 aa9.69□□□□□ -0.86
PCDHB11-202ENST00000624887 MUC17Q685J3 4493 aa9.66□□□□□ -0.86
PCDHB11-202ENST00000624887 HMCN2Q8NDA2 5059 aa9.64□□□□□ -0.87
PCDHB11-202ENST00000624887 KRTAP4-1Q9BYQ7 146 aa9.64□□□□□ -0.87
PCDHB11-202ENST00000624887 P0C880 135 aa9.63□□□□□ -0.87
PCDHB11-202ENST00000624887 KRTAP13-4Q3LI77 160 aa9.6□□□□□ -0.87
PCDHB11-202ENST00000624887 K7ERS5 55 aa9.56□□□□□ -0.88
PCDHB11-202ENST00000624887 KRTAP19-2Q3LHN2 52 aa9.46□□□□□ -0.89
PCDHB11-202ENST00000624887 ROMO1P60602 79 aa9.46□□□□□ -0.9
PCDHB11-202ENST00000624887 A0A0D9SG42 100 aa9.44□□□□□ -0.9
PCDHB11-202ENST00000624887 H3BS24 57 aa9.44□□□□□ -0.9
PCDHB11-202ENST00000624887 M0QZ58 72 aa9.38□□□□□ -0.91
PCDHB11-202ENST00000624887 MUC2Q02817 5179 aa9.31□□□□□ -0.92
PCDHB11-202ENST00000624887 KRTAP12-2P59991 146 aa9.25□□□□□ -0.93
PCDHB11-202ENST00000624887 KRTAP12-1P59990 96 aa9.24□□□□□ -0.93
PCDHB11-202ENST00000624887 CRIPTQ9P021 101 aa9.22□□□□□ -0.93
PCDHB11-202ENST00000624887 FLGP20930 4061 aaPredicted RBP9.22□□□□□ -0.93
PCDHB11-202ENST00000624887 R4GN34 69 aa9.21□□□□□ -0.93
PCDHB11-202ENST00000624887 UBR4Q5T4S7 5183 aa9.18□□□□□ -0.94
PCDHB11-202ENST00000624887 SPINT4Q6UDR6 99 aa9.18□□□□□ -0.94
PCDHB11-202ENST00000624887 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
PCDHB11-202ENST00000624887 RNF213Q63HN8 5207 aa9.11□□□□□ -0.95
PCDHB11-202ENST00000624887 LCE2CQ5TA81 110 aa9.06□□□□□ -0.96
PCDHB11-202ENST00000624887 C10orf95Q9H7T3 257 aa8.93□□□□□ -0.98
PCDHB11-202ENST00000624887 FAT4Q6V0I7 4981 aa8.92□□□□□ -0.98
PCDHB11-202ENST00000624887 KRTAP15-1Q3LI76 137 aa8.92□□□□□ -0.98
PCDHB11-202ENST00000624887 MT1HP80294 61 aa8.88□□□□□ -0.99
PCDHB11-202ENST00000624887 M0R2T5 61 aa8.8□□□□□ -1
PCDHB11-202ENST00000624887 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
PCDHB11-202ENST00000624887 NDUFAF8A1L188 74 aa8.66□□□□□ -1.02
PCDHB11-202ENST00000624887 SPRR2GQ9BYE4 73 aa8.64□□□□□ -1.03
PCDHB11-202ENST00000624887 KRTAP19-1Q8IUB9 90 aa8.59□□□□□ -1.03
PCDHB11-202ENST00000624887 MT2AP02795 61 aa8.58□□□□□ -1.04
PCDHB11-202ENST00000624887 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
PCDHB11-202ENST00000624887 MT1FP04733 61 aa8.55□□□□□ -1.04
PCDHB11-202ENST00000624887 KRTAP10-10P60014 251 aa8.53□□□□□ -1.04
PCDHB11-202ENST00000624887 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
PCDHB11-202ENST00000624887 PLAC4Q8WY50 150 aa8.44□□□□□ -1.06
PCDHB11-202ENST00000624887 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
PCDHB11-202ENST00000624887 TNP1P09430 55 aa8.33□□□□□ -1.08
PCDHB11-202ENST00000624887 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
PCDHB11-202ENST00000624887 KRTAP9-3Q9BYQ3 159 aa8.24□□□□□ -1.09
PCDHB11-202ENST00000624887 KRTAP23-1A1A580 65 aa8.22□□□□□ -1.09
PCDHB11-202ENST00000624887 MT1BP07438 61 aa8.2□□□□□ -1.1
PCDHB11-202ENST00000624887 KRTAP10-5P60370 271 aa8.05□□□□□ -1.12
PCDHB11-202ENST00000624887 MT1XP80297 61 aa8.05□□□□□ -1.12
PCDHB11-202ENST00000624887 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
PCDHB11-202ENST00000624887 LCE2BO14633 110 aa8.01□□□□□ -1.13
PCDHB11-202ENST00000624887 LCE3AQ5TA76 89 aa7.92□□□□□ -1.14
PCDHB11-202ENST00000624887 SPRR5A0A1B0GTR4 108 aa7.89□□□□□ -1.15
PCDHB11-202ENST00000624887 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
PCDHB11-202ENST00000624887 A0A0A0MQY5 61 aa7.84□□□□□ -1.15
PCDHB11-202ENST00000624887 KRTAP10-12P60413 245 aa7.77□□□□□ -1.17
PCDHB11-202ENST00000624887 KRTAP8-1Q8IUC2 63 aa7.77□□□□□ -1.17
PCDHB11-202ENST00000624887 KRTAP10-7P60409 375 aaPredicted RBP7.76□□□□□ -1.17
PCDHB11-202ENST00000624887 USH2AO75445 5202 aa7.75□□□□□ -1.17
PCDHB11-202ENST00000624887 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
PCDHB11-202ENST00000624887 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
PCDHB11-202ENST00000624887 SSPOA2VEC9 5147 aa7.5□□□□□ -1.21
PCDHB11-202ENST00000624887 KRTAP19-6Q3LI70 58 aa7.5□□□□□ -1.21
PCDHB11-202ENST00000624887 FSIP2Q5CZC0 6907 aa7.44□□□□□ -1.22
PCDHB11-202ENST00000624887 KRTAP19-5Q3LI72 72 aa7.39□□□□□ -1.23
PCDHB11-202ENST00000624887 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
PCDHB11-202ENST00000624887 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
PCDHB11-202ENST00000624887 KMT2DO14686 5537 aa7.34□□□□□ -1.23
PCDHB11-202ENST00000624887 KRTAP9-2Q9BYQ4 174 aa7.33□□□□□ -1.24
PCDHB11-202ENST00000624887 FCGBPQ9Y6R7 5405 aaPredicted RBP7.18□□□□□ -1.26
PCDHB11-202ENST00000624887 KRTAP19-7Q3SYF9 63 aa7.18□□□□□ -1.26
PCDHB11-202ENST00000624887 INE1O15225 51 aa7.17□□□□□ -1.26
PCDHB11-202ENST00000624887 LCE3CQ5T5A8 94 aa7.12□□□□□ -1.27
PCDHB11-202ENST00000624887 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
PCDHB11-202ENST00000624887 MT1EP04732 61 aa7.01□□□□□ -1.29
PCDHB11-202ENST00000624887 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
PCDHB11-202ENST00000624887 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
PCDHB11-202ENST00000624887 MT1LQ93083 61 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms