RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 A0A087WVE0 104 aa5.67□□□□□ -1.5
LINC00963-217ENST00000624009 A8MUN3 132 aa5.67□□□□□ -1.5
LINC00963-217ENST00000624009 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
LINC00963-217ENST00000624009 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
LINC00963-217ENST00000624009 MP68P56378 58 aa5.63□□□□□ -1.51
LINC00963-217ENST00000624009 KLKP1Q107X0 134 aa5.63□□□□□ -1.51
LINC00963-217ENST00000624009 CRIPTQ9P021 101 aa5.63□□□□□ -1.51
LINC00963-217ENST00000624009 MACF1Q9UPN3 7388 aaKnown RBP5.62□□□□□ -1.51
LINC00963-217ENST00000624009 H0YAA0 97 aa5.61□□□□□ -1.51
LINC00963-217ENST00000624009 H3BPC8 53 aa5.61□□□□□ -1.51
LINC00963-217ENST00000624009 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
LINC00963-217ENST00000624009 LINC00208Q96KT6 92 aa5.61□□□□□ -1.51
LINC00963-217ENST00000624009 IMUPQ9GZP8 106 aa5.61□□□□□ -1.51
LINC00963-217ENST00000624009 NDUFC1O43677 76 aa5.6□□□□□ -1.51
LINC00963-217ENST00000624009 Q5VV11 94 aa5.58□□□□□ -1.52
LINC00963-217ENST00000624009 MT1BP07438 61 aa5.56□□□□□ -1.52
LINC00963-217ENST00000624009 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
LINC00963-217ENST00000624009 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
LINC00963-217ENST00000624009 SCGB1A1P11684 91 aa5.52□□□□□ -1.53
LINC00963-217ENST00000624009 A6NN06 94 aa5.48□□□□□ -1.53
LINC00963-217ENST00000624009 DMAC1Q96GE9 116 aa5.48□□□□□ -1.53
LINC00963-217ENST00000624009 K7ERU9 68 aa5.47□□□□□ -1.53
LINC00963-217ENST00000624009 SMIM20Q8N5G0 67 aa5.47□□□□□ -1.53
LINC00963-217ENST00000624009 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
LINC00963-217ENST00000624009 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
LINC00963-217ENST00000624009 ADM2Q7Z4H4 148 aa5.43□□□□□ -1.54
LINC00963-217ENST00000624009 C20orf197Q8N268 126 aa5.42□□□□□ -1.54
LINC00963-217ENST00000624009 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.54
LINC00963-217ENST00000624009 MT-ATP8P03928 68 aa5.4□□□□□ -1.54
LINC00963-217ENST00000624009 ACYP2P14621 99 aa5.35□□□□□ -1.55
LINC00963-217ENST00000624009 R4GN34 69 aa5.33□□□□□ -1.56
LINC00963-217ENST00000624009 H3BS24 57 aa5.31□□□□□ -1.56
LINC00963-217ENST00000624009 P0C880 135 aa5.31□□□□□ -1.56
LINC00963-217ENST00000624009 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
LINC00963-217ENST00000624009 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
LINC00963-217ENST00000624009 PLAC4Q8WY50 150 aa5.28□□□□□ -1.56
LINC00963-217ENST00000624009 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
LINC00963-217ENST00000624009 M0QZ58 72 aa5.26□□□□□ -1.57
LINC00963-217ENST00000624009 SPANXA2-OT1Q8N9U9 137 aa5.26□□□□□ -1.57
LINC00963-217ENST00000624009 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
LINC00963-217ENST00000624009 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
LINC00963-217ENST00000624009 SERP2Q8N6R1 65 aa5.24□□□□□ -1.57
LINC00963-217ENST00000624009 MT1XP80297 61 aa5.23□□□□□ -1.57
LINC00963-217ENST00000624009 NEBP20929 6669 aa5.22□□□□□ -1.57
LINC00963-217ENST00000624009 CHKB-CPT1BH3BT56 60 aa5.21□□□□□ -1.58
LINC00963-217ENST00000624009 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
LINC00963-217ENST00000624009 KMT2DO14686 5537 aa5.2□□□□□ -1.58
LINC00963-217ENST00000624009 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
LINC00963-217ENST00000624009 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
LINC00963-217ENST00000624009 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
LINC00963-217ENST00000624009 KRTAP12-2P59991 146 aa5.16□□□□□ -1.58
LINC00963-217ENST00000624009 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
LINC00963-217ENST00000624009 LINC01554Q52M75 96 aa5.13□□□□□ -1.59
LINC00963-217ENST00000624009 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
LINC00963-217ENST00000624009 COX7CP15954 63 aa5.07□□□□□ -1.6
LINC00963-217ENST00000624009 COA5Q86WW8 74 aa5.04□□□□□ -1.6
LINC00963-217ENST00000624009 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
LINC00963-217ENST00000624009 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
LINC00963-217ENST00000624009 KRTAP10-12P60413 245 aa5□□□□□ -1.61
LINC00963-217ENST00000624009 H7BZZ5 65 aa4.99□□□□□ -1.61
LINC00963-217ENST00000624009 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
LINC00963-217ENST00000624009 SEC61GP60059 68 aa4.98□□□□□ -1.61
LINC00963-217ENST00000624009 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
LINC00963-217ENST00000624009 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
LINC00963-217ENST00000624009 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
LINC00963-217ENST00000624009 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
LINC00963-217ENST00000624009 SPRR2EP22531 72 aa4.93□□□□□ -1.62
LINC00963-217ENST00000624009 SPRR2BP35325 72 aa4.93□□□□□ -1.62
LINC00963-217ENST00000624009 SPRR2AP35326 72 aa4.93□□□□□ -1.62
LINC00963-217ENST00000624009 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
LINC00963-217ENST00000624009 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
LINC00963-217ENST00000624009 CYSTM1Q9H1C7 97 aa4.91□□□□□ -1.62
LINC00963-217ENST00000624009 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
LINC00963-217ENST00000624009 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
LINC00963-217ENST00000624009 CAMK2N1Q7Z7J9 78 aa4.89□□□□□ -1.63
LINC00963-217ENST00000624009 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
LINC00963-217ENST00000624009 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
LINC00963-217ENST00000624009 A0A1B0GU33 70 aa4.87□□□□□ -1.63
LINC00963-217ENST00000624009 ATP5EP56381 51 aaPredicted RBP4.81□□□□□ -1.64
LINC00963-217ENST00000624009 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
LINC00963-217ENST00000624009 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
LINC00963-217ENST00000624009 A0A0D9SG42 100 aa4.79□□□□□ -1.64
LINC00963-217ENST00000624009 A0A1B0GU69 56 aa4.79□□□□□ -1.64
LINC00963-217ENST00000624009 SPRR2DP22532 72 aa4.78□□□□□ -1.64
LINC00963-217ENST00000624009 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
LINC00963-217ENST00000624009 SMIM26A0A096LP01 95 aa4.76□□□□□ -1.65
LINC00963-217ENST00000624009 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
LINC00963-217ENST00000624009 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
LINC00963-217ENST00000624009 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
LINC00963-217ENST00000624009 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
LINC00963-217ENST00000624009 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
LINC00963-217ENST00000624009 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
LINC00963-217ENST00000624009 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
LINC00963-217ENST00000624009 TMEM258P61165 79 aa4.66□□□□□ -1.66
LINC00963-217ENST00000624009 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.67
LINC00963-217ENST00000624009 MT1EP04732 61 aa4.63□□□□□ -1.67
LINC00963-217ENST00000624009 A8MU10 97 aa4.62□□□□□ -1.67
LINC00963-217ENST00000624009 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
LINC00963-217ENST00000624009 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
LINC00963-217ENST00000624009 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms