RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 IGKV2-30P06310 120 aa3.74□□□□□ -1.81
CBWD3-219ENST00000622817 TMEM258P61165 79 aa3.74□□□□□ -1.81
CBWD3-219ENST00000622817 CYP4F30PQ9H0H9 118 aa3.74□□□□□ -1.81
CBWD3-219ENST00000622817 IGKV2D-30A0A075B6S6 120 aa3.73□□□□□ -1.81
CBWD3-219ENST00000622817 PCOTHQ58A44 107 aa3.72□□□□□ -1.81
CBWD3-219ENST00000622817 C7orf65Q6ZTY9 151 aa3.72□□□□□ -1.81
CBWD3-219ENST00000622817 ATP5EP56381 51 aaPredicted RBP3.71□□□□□ -1.82
CBWD3-219ENST00000622817 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
CBWD3-219ENST00000622817 SPANXA2-OT1Q8N9U9 137 aa3.71□□□□□ -1.82
CBWD3-219ENST00000622817 FAM236DA0A1B0GTK5 79 aa3.7□□□□□ -1.82
CBWD3-219ENST00000622817 FAM236CP0DP71 79 aa3.7□□□□□ -1.82
CBWD3-219ENST00000622817 SPINK7P58062 85 aa3.69□□□□□ -1.82
CBWD3-219ENST00000622817 HRES1P13985 223 aa3.68□□□□□ -1.82
CBWD3-219ENST00000622817 SEC61BP60468 96 aaKnown RBP3.67□□□□□ -1.82
CBWD3-219ENST00000622817 HERC1Q15751 4861 aa3.63□□□□□ -1.83
CBWD3-219ENST00000622817 SERP1Q9Y6X1 66 aa3.63□□□□□ -1.83
CBWD3-219ENST00000622817 C4orf26Q17RF5 130 aa3.62□□□□□ -1.83
CBWD3-219ENST00000622817 DMAC1Q96GE9 116 aa3.62□□□□□ -1.83
CBWD3-219ENST00000622817 RPS28P62857 69 aaKnown RBP3.62□□□□□ -1.83
CBWD3-219ENST00000622817 MPLKIPQ8TAP9 179 aa3.62□□□□□ -1.83
CBWD3-219ENST00000622817 LRP2P98164 4655 aa3.62□□□□□ -1.83
CBWD3-219ENST00000622817 LPAP08519 4548 aa3.62□□□□□ -1.83
CBWD3-219ENST00000622817 A8MUN3 132 aa3.61□□□□□ -1.83
CBWD3-219ENST00000622817 ACYP2P14621 99 aa3.61□□□□□ -1.83
CBWD3-219ENST00000622817 HMCN2Q8NDA2 5059 aa3.6□□□□□ -1.83
CBWD3-219ENST00000622817 COX6B2Q6YFQ2 88 aa3.59□□□□□ -1.83
CBWD3-219ENST00000622817 COA5Q86WW8 74 aa3.58□□□□□ -1.84
CBWD3-219ENST00000622817 RBM12B-AS1Q9P1G2 102 aa3.56□□□□□ -1.84
CBWD3-219ENST00000622817 CHKB-CPT1BH3BT56 60 aa3.55□□□□□ -1.84
CBWD3-219ENST00000622817 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
CBWD3-219ENST00000622817 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
CBWD3-219ENST00000622817 SMIM26A0A096LP01 95 aa3.53□□□□□ -1.84
CBWD3-219ENST00000622817 H1FX-AS1Q4G0G2 97 aa3.52□□□□□ -1.85
CBWD3-219ENST00000622817 SPTSSBQ8NFR3 76 aa3.5□□□□□ -1.85
CBWD3-219ENST00000622817 S4R3F8 94 aa3.48□□□□□ -1.85
CBWD3-219ENST00000622817 V9GYY9 64 aa3.47□□□□□ -1.85
CBWD3-219ENST00000622817 Q1T7F1 81 aa3.46□□□□□ -1.86
CBWD3-219ENST00000622817 LCA10Q71F78 164 aa3.46□□□□□ -1.86
CBWD3-219ENST00000622817 KRTAP19-2Q3LHN2 52 aa3.45□□□□□ -1.86
CBWD3-219ENST00000622817 UBR4Q5T4S7 5183 aa3.45□□□□□ -1.86
CBWD3-219ENST00000622817 LINC01558Q9Y6Z2 57 aa3.44□□□□□ -1.86
CBWD3-219ENST00000622817 RNF213Q63HN8 5207 aa3.43□□□□□ -1.86
CBWD3-219ENST00000622817 CSAG1Q6PB30 78 aa3.42□□□□□ -1.86
CBWD3-219ENST00000622817 MUC2Q02817 5179 aa3.41□□□□□ -1.86
CBWD3-219ENST00000622817 PRR15LQ9BU68 103 aa3.4□□□□□ -1.87
CBWD3-219ENST00000622817 A0A1B0GU69 56 aa3.39□□□□□ -1.87
CBWD3-219ENST00000622817 PSPHP1O15172 72 aa3.39□□□□□ -1.87
CBWD3-219ENST00000622817 SEC61GP60059 68 aa3.39□□□□□ -1.87
CBWD3-219ENST00000622817 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
CBWD3-219ENST00000622817 Q5VV11 94 aa3.36□□□□□ -1.87
CBWD3-219ENST00000622817 H0YAA0 97 aa3.34□□□□□ -1.87
CBWD3-219ENST00000622817 MT1HP80294 61 aa3.33□□□□□ -1.88
CBWD3-219ENST00000622817 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
CBWD3-219ENST00000622817 M0R2T5 61 aa3.31□□□□□ -1.88
CBWD3-219ENST00000622817 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
CBWD3-219ENST00000622817 FAT4Q6V0I7 4981 aa3.3□□□□□ -1.88
CBWD3-219ENST00000622817 A0A1B0GU33 70 aa3.3□□□□□ -1.88
CBWD3-219ENST00000622817 A6NED7 52 aa3.3□□□□□ -1.88
CBWD3-219ENST00000622817 UQCR11O14957 56 aa3.29□□□□□ -1.88
CBWD3-219ENST00000622817 P0C880 135 aa3.29□□□□□ -1.88
CBWD3-219ENST00000622817 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
CBWD3-219ENST00000622817 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
CBWD3-219ENST00000622817 SPATA8Q6RVD6 105 aa3.24□□□□□ -1.89
CBWD3-219ENST00000622817 M0QZ58 72 aa3.24□□□□□ -1.89
CBWD3-219ENST00000622817 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
CBWD3-219ENST00000622817 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
CBWD3-219ENST00000622817 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
CBWD3-219ENST00000622817 R4GN34 69 aa3.22□□□□□ -1.89
CBWD3-219ENST00000622817 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
CBWD3-219ENST00000622817 MT2AP02795 61 aa3.19□□□□□ -1.9
CBWD3-219ENST00000622817 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
CBWD3-219ENST00000622817 A8MU10 97 aa3.18□□□□□ -1.9
CBWD3-219ENST00000622817 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
CBWD3-219ENST00000622817 A0A0D9SG42 100 aa3.17□□□□□ -1.9
CBWD3-219ENST00000622817 MT1FP04733 61 aa3.17□□□□□ -1.9
CBWD3-219ENST00000622817 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
CBWD3-219ENST00000622817 PRO0628Q9UI54 55 aa3.17□□□□□ -1.9
CBWD3-219ENST00000622817 LINC01554Q52M75 96 aa3.14□□□□□ -1.91
CBWD3-219ENST00000622817 K7ERS5 55 aa3.13□□□□□ -1.91
CBWD3-219ENST00000622817 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
CBWD3-219ENST00000622817 A6NN06 94 aa3.11□□□□□ -1.91
CBWD3-219ENST00000622817 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
CBWD3-219ENST00000622817 SPINT4Q6UDR6 99 aa3.09□□□□□ -1.91
CBWD3-219ENST00000622817 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
CBWD3-219ENST00000622817 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
CBWD3-219ENST00000622817 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
CBWD3-219ENST00000622817 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
CBWD3-219ENST00000622817 PLAC4Q8WY50 150 aa3.04□□□□□ -1.92
CBWD3-219ENST00000622817 CAMK2N1Q7Z7J9 78 aa3.01□□□□□ -1.93
CBWD3-219ENST00000622817 MT1BP07438 61 aa2.99□□□□□ -1.93
CBWD3-219ENST00000622817 ROMO1P60602 79 aa2.98□□□□□ -1.93
CBWD3-219ENST00000622817 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
CBWD3-219ENST00000622817 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CBWD3-219ENST00000622817 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
CBWD3-219ENST00000622817 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
CBWD3-219ENST00000622817 USH2AO75445 5202 aa2.91□□□□□ -1.94
CBWD3-219ENST00000622817 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
CBWD3-219ENST00000622817 NDUFAF8A1L188 74 aa2.9□□□□□ -1.94
CBWD3-219ENST00000622817 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.94
CBWD3-219ENST00000622817 MT1XP80297 61 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms