RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 CASC2Q6XLA1 102 aa2.6□□□□□ -1.99
RPRD1B-209ENST00000622494 WFDC13Q8IUB5 93 aa2.6□□□□□ -1.99
RPRD1B-209ENST00000622494 TMEM254Q8TBM7 123 aa2.6□□□□□ -1.99
RPRD1B-209ENST00000622494 MRPL34Q9BQ48 92 aaKnown RBP2.6□□□□□ -1.99
RPRD1B-209ENST00000622494 FSIP2Q5CZC0 6907 aa2.59□□□□□ -1.99
RPRD1B-209ENST00000622494 IMUPQ9GZP8 106 aa2.59□□□□□ -1.99
RPRD1B-209ENST00000622494 USH2AO75445 5202 aa2.58□□□□□ -2
RPRD1B-209ENST00000622494 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
RPRD1B-209ENST00000622494 C4orf26Q17RF5 130 aa2.58□□□□□ -2
RPRD1B-209ENST00000622494 OCR1Q9BZK8 76 aa2.57□□□□□ -2
RPRD1B-209ENST00000622494 NDUFS5O43920 106 aa2.56□□□□□ -2
RPRD1B-209ENST00000622494 Q5W150 140 aa2.56□□□□□ -2
RPRD1B-209ENST00000622494 ATP11AUNQ6ZP68 121 aa2.56□□□□□ -2
RPRD1B-209ENST00000622494 SSPOA2VEC9 5147 aa2.55□□□□□ -2
RPRD1B-209ENST00000622494 ZCCHC13Q8WW36 166 aaKnown RBP2.55□□□□□ -2
RPRD1B-209ENST00000622494 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
RPRD1B-209ENST00000622494 TP53AIP1Q9HCN2 124 aa2.54□□□□□ -2
RPRD1B-209ENST00000622494 FAM236AA0A1B0GUQ0 79 aa2.53□□□□□ -2
RPRD1B-209ENST00000622494 FAM236BA0A1B0GV22 79 aa2.53□□□□□ -2
RPRD1B-209ENST00000622494 M0R2T5 61 aa2.53□□□□□ -2
RPRD1B-209ENST00000622494 SCGB1A1P11684 91 aa2.53□□□□□ -2
RPRD1B-209ENST00000622494 COX6B2Q6YFQ2 88 aa2.53□□□□□ -2
RPRD1B-209ENST00000622494 UQCRQO14949 82 aa2.52□□□□□ -2.01
RPRD1B-209ENST00000622494 SPINK7P58062 85 aa2.51□□□□□ -2.01
RPRD1B-209ENST00000622494 TRAV7A0A075B6U4 112 aa2.5□□□□□ -2.01
RPRD1B-209ENST00000622494 SMIM20Q8N5G0 67 aa2.5□□□□□ -2.01
RPRD1B-209ENST00000622494 PRO0628Q9UI54 55 aa2.5□□□□□ -2.01
RPRD1B-209ENST00000622494 TRAV22A0A0B4J277 110 aa2.49□□□□□ -2.01
RPRD1B-209ENST00000622494 H0Y9P7 68 aa2.49□□□□□ -2.01
RPRD1B-209ENST00000622494 ATOX1O00244 68 aa2.49□□□□□ -2.01
RPRD1B-209ENST00000622494 MT2AP02795 61 aa2.48□□□□□ -2.01
RPRD1B-209ENST00000622494 HRES1P13985 223 aa2.48□□□□□ -2.01
RPRD1B-209ENST00000622494 C1orf64Q8NEQ6 169 aa2.48□□□□□ -2.01
RPRD1B-209ENST00000622494 LINC00208Q96KT6 92 aa2.48□□□□□ -2.01
RPRD1B-209ENST00000622494 CYP4F30PQ9H0H9 118 aa2.48□□□□□ -2.01
RPRD1B-209ENST00000622494 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
RPRD1B-209ENST00000622494 MT1FP04733 61 aa2.47□□□□□ -2.01
RPRD1B-209ENST00000622494 MP68P56378 58 aa2.47□□□□□ -2.01
RPRD1B-209ENST00000622494 SERP2Q8N6R1 65 aa2.47□□□□□ -2.01
RPRD1B-209ENST00000622494 LOC101927531A0A1B0GV80 90 aa2.46□□□□□ -2.02
RPRD1B-209ENST00000622494 H3BPC8 53 aa2.46□□□□□ -2.02
RPRD1B-209ENST00000622494 KLKP1Q107X0 134 aa2.46□□□□□ -2.02
RPRD1B-209ENST00000622494 C7orf65Q6ZTY9 151 aa2.46□□□□□ -2.02
RPRD1B-209ENST00000622494 COX7CP15954 63 aa2.45□□□□□ -2.02
RPRD1B-209ENST00000622494 ANAPC13Q9BS18 74 aa2.44□□□□□ -2.02
RPRD1B-209ENST00000622494 SNURFQ9Y675 71 aa2.44□□□□□ -2.02
RPRD1B-209ENST00000622494 FAM236DA0A1B0GTK5 79 aa2.43□□□□□ -2.02
RPRD1B-209ENST00000622494 A8MU10 97 aa2.43□□□□□ -2.02
RPRD1B-209ENST00000622494 FAM236CP0DP71 79 aa2.43□□□□□ -2.02
RPRD1B-209ENST00000622494 PMAIP1Q13794 54 aa2.43□□□□□ -2.02
RPRD1B-209ENST00000622494 C20orf197Q8N268 126 aa2.43□□□□□ -2.02
RPRD1B-209ENST00000622494 RBM12B-AS1Q9P1G2 102 aa2.43□□□□□ -2.02
RPRD1B-209ENST00000622494 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
RPRD1B-209ENST00000622494 CCDC179H3BU77 68 aa2.41□□□□□ -2.02
RPRD1B-209ENST00000622494 H1FX-AS1Q4G0G2 97 aa2.4□□□□□ -2.03
RPRD1B-209ENST00000622494 CYSTM1Q9H1C7 97 aa2.4□□□□□ -2.03
RPRD1B-209ENST00000622494 SMIM26A0A096LP01 95 aa2.39□□□□□ -2.03
RPRD1B-209ENST00000622494 KRTAP10-10P60014 251 aa2.39□□□□□ -2.03
RPRD1B-209ENST00000622494 H7BZZ5 65 aa2.38□□□□□ -2.03
RPRD1B-209ENST00000622494 PSPHP1O15172 72 aa2.38□□□□□ -2.03
RPRD1B-209ENST00000622494 NDUFC1O43677 76 aa2.37□□□□□ -2.03
RPRD1B-209ENST00000622494 A8MUN3 132 aa2.36□□□□□ -2.03
RPRD1B-209ENST00000622494 RPS28P62857 69 aaKnown RBP2.36□□□□□ -2.03
RPRD1B-209ENST00000622494 SPANXA2-OT1Q8N9U9 137 aa2.36□□□□□ -2.03
RPRD1B-209ENST00000622494 DMAC1Q96GE9 116 aa2.36□□□□□ -2.03
RPRD1B-209ENST00000622494 ACYP2P14621 99 aa2.35□□□□□ -2.03
RPRD1B-209ENST00000622494 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
RPRD1B-209ENST00000622494 KRTAP12-2P59991 146 aa2.34□□□□□ -2.03
RPRD1B-209ENST00000622494 LCA10Q71F78 164 aa2.34□□□□□ -2.03
RPRD1B-209ENST00000622494 S4R3F8 94 aa2.33□□□□□ -2.04
RPRD1B-209ENST00000622494 CSAG1Q6PB30 78 aa2.31□□□□□ -2.04
RPRD1B-209ENST00000622494 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
RPRD1B-209ENST00000622494 TMEM258P61165 79 aa2.29□□□□□ -2.04
RPRD1B-209ENST00000622494 COA5Q86WW8 74 aa2.29□□□□□ -2.04
RPRD1B-209ENST00000622494 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
RPRD1B-209ENST00000622494 CHKB-CPT1BH3BT56 60 aa2.28□□□□□ -2.04
RPRD1B-209ENST00000622494 KRTAP19-6Q3LI70 58 aa2.28□□□□□ -2.04
RPRD1B-209ENST00000622494 ATP5EP56381 51 aaPredicted RBP2.27□□□□□ -2.05
RPRD1B-209ENST00000622494 H0YAA0 97 aa2.25□□□□□ -2.05
RPRD1B-209ENST00000622494 MT1BP07438 61 aa2.25□□□□□ -2.05
RPRD1B-209ENST00000622494 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
RPRD1B-209ENST00000622494 SPTSSBQ8NFR3 76 aa2.25□□□□□ -2.05
RPRD1B-209ENST00000622494 ADM2Q7Z4H4 148 aa2.24□□□□□ -2.05
RPRD1B-209ENST00000622494 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
RPRD1B-209ENST00000622494 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
RPRD1B-209ENST00000622494 SERP1Q9Y6X1 66 aa2.24□□□□□ -2.05
RPRD1B-209ENST00000622494 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
RPRD1B-209ENST00000622494 P0C880 135 aa2.22□□□□□ -2.05
RPRD1B-209ENST00000622494 KMT2DO14686 5537 aa2.22□□□□□ -2.05
RPRD1B-209ENST00000622494 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
RPRD1B-209ENST00000622494 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
RPRD1B-209ENST00000622494 LINC01558Q9Y6Z2 57 aa2.19□□□□□ -2.06
RPRD1B-209ENST00000622494 KRTAP19-8Q3LI54 63 aa2.18□□□□□ -2.06
RPRD1B-209ENST00000622494 CRIPTQ9P021 101 aa2.18□□□□□ -2.06
RPRD1B-209ENST00000622494 NEBP20929 6669 aa2.18□□□□□ -2.06
RPRD1B-209ENST00000622494 A0A1B0GU69 56 aa2.17□□□□□ -2.06
RPRD1B-209ENST00000622494 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
RPRD1B-209ENST00000622494 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
RPRD1B-209ENST00000622494 SPRR2GQ9BYE4 73 aa2.17□□□□□ -2.06
RPRD1B-209ENST00000622494 Q1T7F1 81 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms