RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 Q96NJ1 140 aa8.33□□□□□ -1.08
MUC1-228ENST00000620103 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
MUC1-228ENST00000620103 C8orf87E5RJ46 101 aa8.29□□□□□ -1.08
MUC1-228ENST00000620103 C9orf92A6NGG3 77 aa8.28□□□□□ -1.08
MUC1-228ENST00000620103 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
MUC1-228ENST00000620103 A0A1B0GVX0 72 aa8.27□□□□□ -1.09
MUC1-228ENST00000620103 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
MUC1-228ENST00000620103 KRTAP9-6A0A140TA67 174 aa8.25□□□□□ -1.09
MUC1-228ENST00000620103 LINC00313P59037 77 aa8.24□□□□□ -1.09
MUC1-228ENST00000620103 LCE2DQ5TA82 110 aaPredicted RBP8.22□□□□□ -1.09
MUC1-228ENST00000620103 ACYP2P14621 99 aa8.19□□□□□ -1.1
MUC1-228ENST00000620103 IGHV6-1A0A0B4J1U7 121 aa8.17□□□□□ -1.1
MUC1-228ENST00000620103 MT1HP80294 61 aa8.17□□□□□ -1.1
MUC1-228ENST00000620103 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
MUC1-228ENST00000620103 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
MUC1-228ENST00000620103 LINC01554Q52M75 96 aa8.15□□□□□ -1.11
MUC1-228ENST00000620103 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
MUC1-228ENST00000620103 PRAC1Q96KF2 57 aa8.13□□□□□ -1.11
MUC1-228ENST00000620103 A0A1B0GU69 56 aa8.08□□□□□ -1.12
MUC1-228ENST00000620103 Q5W150 140 aa8.07□□□□□ -1.12
MUC1-228ENST00000620103 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
MUC1-228ENST00000620103 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
MUC1-228ENST00000620103 NOTCH2NLQ7Z3S9 236 aa8.06□□□□□ -1.12
MUC1-228ENST00000620103 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
MUC1-228ENST00000620103 FLGP20930 4061 aaPredicted RBP8.04□□□□□ -1.12
MUC1-228ENST00000620103 KRTAP10-6P60371 365 aaPredicted RBP8.03□□□□□ -1.12
MUC1-228ENST00000620103 UQCR11O14957 56 aa8.03□□□□□ -1.12
MUC1-228ENST00000620103 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
MUC1-228ENST00000620103 CRCT1Q9UGL9 99 aa8.02□□□□□ -1.13
MUC1-228ENST00000620103 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
MUC1-228ENST00000620103 IGKV2-30P06310 120 aa7.96□□□□□ -1.14
MUC1-228ENST00000620103 M0R2T5 61 aa7.95□□□□□ -1.14
MUC1-228ENST00000620103 H3BS24 57 aa7.92□□□□□ -1.14
MUC1-228ENST00000620103 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
MUC1-228ENST00000620103 A8MUU9 505 aa7.89□□□□□ -1.15
MUC1-228ENST00000620103 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
MUC1-228ENST00000620103 IGKV2D-30A0A075B6S6 120 aa7.81□□□□□ -1.16
MUC1-228ENST00000620103 KRTAP16-1A8MUX0 517 aa7.78□□□□□ -1.16
MUC1-228ENST00000620103 KRTAP9-8Q9BYQ0 159 aa7.73□□□□□ -1.17
MUC1-228ENST00000620103 KRTAP25-1Q3LHN0 102 aa7.71□□□□□ -1.18
MUC1-228ENST00000620103 USH2AO75445 5202 aa7.65□□□□□ -1.18
MUC1-228ENST00000620103 H0YAA0 97 aa7.62□□□□□ -1.19
MUC1-228ENST00000620103 ROMO1P60602 79 aa7.62□□□□□ -1.19
MUC1-228ENST00000620103 MT2AP02795 61 aa7.6□□□□□ -1.19
MUC1-228ENST00000620103 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
MUC1-228ENST00000620103 MT1FP04733 61 aa7.54□□□□□ -1.2
MUC1-228ENST00000620103 A0A1B0GU33 70 aa7.53□□□□□ -1.2
MUC1-228ENST00000620103 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.2
MUC1-228ENST00000620103 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.2
MUC1-228ENST00000620103 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.2
MUC1-228ENST00000620103 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
MUC1-228ENST00000620103 LCE2BO14633 110 aa7.48□□□□□ -1.21
MUC1-228ENST00000620103 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.48□□□□□ -1.21
MUC1-228ENST00000620103 K7ERS5 55 aa7.46□□□□□ -1.21
MUC1-228ENST00000620103 KRTAP10-10P60014 251 aa7.46□□□□□ -1.21
MUC1-228ENST00000620103 FCGBPQ9Y6R7 5405 aaPredicted RBP7.46□□□□□ -1.22
MUC1-228ENST00000620103 KRTAP9-7A8MTY7 169 aa7.41□□□□□ -1.22
MUC1-228ENST00000620103 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
MUC1-228ENST00000620103 P0C880 135 aa7.36□□□□□ -1.23
MUC1-228ENST00000620103 KRTAP3-1Q9BYR8 98 aa7.35□□□□□ -1.23
MUC1-228ENST00000620103 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
MUC1-228ENST00000620103 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
MUC1-228ENST00000620103 MACF1Q9UPN3 7388 aaKnown RBP7.19□□□□□ -1.26
MUC1-228ENST00000620103 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
MUC1-228ENST00000620103 SYNE2Q8WXH0 6885 aaKnown RBP7.15□□□□□ -1.26
MUC1-228ENST00000620103 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
MUC1-228ENST00000620103 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
MUC1-228ENST00000620103 NDUFAF8A1L188 74 aa7.01□□□□□ -1.29
MUC1-228ENST00000620103 S4R3F8 94 aa6.98□□□□□ -1.29
MUC1-228ENST00000620103 A0A0D9SG42 100 aa6.97□□□□□ -1.29
MUC1-228ENST00000620103 KRTAP6-3Q3LI67 103 aa6.97□□□□□ -1.29
MUC1-228ENST00000620103 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
MUC1-228ENST00000620103 MT1BP07438 61 aa6.9□□□□□ -1.31
MUC1-228ENST00000620103 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.31
MUC1-228ENST00000620103 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
MUC1-228ENST00000620103 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
MUC1-228ENST00000620103 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
MUC1-228ENST00000620103 M0QZ58 72 aa6.78□□□□□ -1.32
MUC1-228ENST00000620103 NEBP20929 6669 aa6.76□□□□□ -1.33
MUC1-228ENST00000620103 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
MUC1-228ENST00000620103 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.34
MUC1-228ENST00000620103 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
MUC1-228ENST00000620103 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
MUC1-228ENST00000620103 KMT2DO14686 5537 aa6.59□□□□□ -1.35
MUC1-228ENST00000620103 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
MUC1-228ENST00000620103 MDN1Q9NU22 5596 aa6.55□□□□□ -1.36
MUC1-228ENST00000620103 LUZP6Q538Z0 58 aa6.55□□□□□ -1.36
MUC1-228ENST00000620103 KRTAP20-1Q3LI63 56 aa6.48□□□□□ -1.37
MUC1-228ENST00000620103 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
MUC1-228ENST00000620103 MT1XP80297 61 aa6.43□□□□□ -1.38
MUC1-228ENST00000620103 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
MUC1-228ENST00000620103 R4GN34 69 aa6.39□□□□□ -1.39
MUC1-228ENST00000620103 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
MUC1-228ENST00000620103 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
MUC1-228ENST00000620103 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
MUC1-228ENST00000620103 KRTAP8-1Q8IUC2 63 aa6.27□□□□□ -1.41
MUC1-228ENST00000620103 SPRR2EP22531 72 aa6.27□□□□□ -1.41
MUC1-228ENST00000620103 SPRR2BP35325 72 aa6.27□□□□□ -1.41
MUC1-228ENST00000620103 SPRR2AP35326 72 aa6.27□□□□□ -1.41
MUC1-228ENST00000620103 LCE1AQ5T7P2 110 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms