RNA–Protein interactions for RNA: ENST00000618539.4

FDFT1-224, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FDFT1, Length 2,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-224ENST00000618539 A0A1B0GU33 70 aa8.66□□□□□ -1.02
FDFT1-224ENST00000618539 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
FDFT1-224ENST00000618539 KRTAP1-4P0C5Y4 121 aa8.65□□□□□ -1.03
FDFT1-224ENST00000618539 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
FDFT1-224ENST00000618539 HERC2O95714 4834 aa8.63□□□□□ -1.03
FDFT1-224ENST00000618539 KRTAP13-2Q52LG2 175 aa8.61□□□□□ -1.03
FDFT1-224ENST00000618539 H1FX-AS1Q4G0G2 97 aa8.6□□□□□ -1.03
FDFT1-224ENST00000618539 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
FDFT1-224ENST00000618539 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
FDFT1-224ENST00000618539 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
FDFT1-224ENST00000618539 LRP1Q07954 4544 aaKnown RBP8.54□□□□□ -1.04
FDFT1-224ENST00000618539 K7ERS5 55 aa8.52□□□□□ -1.05
FDFT1-224ENST00000618539 FAT3Q8TDW7 4589 aa8.5□□□□□ -1.05
FDFT1-224ENST00000618539 TNXBP22105 4242 aa8.45□□□□□ -1.06
FDFT1-224ENST00000618539 TPRXLQ17RH7 258 aa8.45□□□□□ -1.06
FDFT1-224ENST00000618539 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
FDFT1-224ENST00000618539 ABCA13Q86UQ4 5058 aa8.43□□□□□ -1.06
FDFT1-224ENST00000618539 KRTAP10-8P60410 259 aa8.43□□□□□ -1.06
FDFT1-224ENST00000618539 COX6B2Q6YFQ2 88 aa8.41□□□□□ -1.06
FDFT1-224ENST00000618539 KRTAP3-1Q9BYR8 98 aa8.39□□□□□ -1.07
FDFT1-224ENST00000618539 SEC61BP60468 96 aaKnown RBP8.39□□□□□ -1.07
FDFT1-224ENST00000618539 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
FDFT1-224ENST00000618539 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
FDFT1-224ENST00000618539 RPS29P62273 56 aaKnown RBP8.34□□□□□ -1.07
FDFT1-224ENST00000618539 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
FDFT1-224ENST00000618539 DMBT1Q9UGM3 2413 aaPredicted RBP8.29□□□□□ -1.08
FDFT1-224ENST00000618539 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
FDFT1-224ENST00000618539 A0A0D9SG42 100 aa8.24□□□□□ -1.09
FDFT1-224ENST00000618539 J3QL48 77 aa8.21□□□□□ -1.1
FDFT1-224ENST00000618539 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
FDFT1-224ENST00000618539 KRTAP10-6P60371 365 aaPredicted RBP8.14□□□□□ -1.11
FDFT1-224ENST00000618539 C9orf92A6NGG3 77 aa8.11□□□□□ -1.11
FDFT1-224ENST00000618539 S4R3F8 94 aa8.03□□□□□ -1.12
FDFT1-224ENST00000618539 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
FDFT1-224ENST00000618539 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
FDFT1-224ENST00000618539 KRTAP3-3Q9BYR6 98 aa7.97□□□□□ -1.13
FDFT1-224ENST00000618539 HERC1Q15751 4861 aa7.96□□□□□ -1.13
FDFT1-224ENST00000618539 LPAP08519 4548 aa7.96□□□□□ -1.14
FDFT1-224ENST00000618539 XP32Q5T750 250 aa7.9□□□□□ -1.15
FDFT1-224ENST00000618539 HMCN2Q8NDA2 5059 aa7.88□□□□□ -1.15
FDFT1-224ENST00000618539 LRP2P98164 4655 aa7.87□□□□□ -1.15
FDFT1-224ENST00000618539 KRTAP12-1P59990 96 aa7.85□□□□□ -1.15
FDFT1-224ENST00000618539 MUC17Q685J3 4493 aa7.71□□□□□ -1.17
FDFT1-224ENST00000618539 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
FDFT1-224ENST00000618539 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
FDFT1-224ENST00000618539 MUC2Q02817 5179 aa7.56□□□□□ -1.2
FDFT1-224ENST00000618539 M0QZ58 72 aa7.53□□□□□ -1.2
FDFT1-224ENST00000618539 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
FDFT1-224ENST00000618539 UBR4Q5T4S7 5183 aa7.48□□□□□ -1.21
FDFT1-224ENST00000618539 RNF213Q63HN8 5207 aa7.41□□□□□ -1.22
FDFT1-224ENST00000618539 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
FDFT1-224ENST00000618539 KRTAP19-2Q3LHN2 52 aa7.31□□□□□ -1.24
FDFT1-224ENST00000618539 R4GN34 69 aa7.26□□□□□ -1.25
FDFT1-224ENST00000618539 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
FDFT1-224ENST00000618539 FAT4Q6V0I7 4981 aa7.22□□□□□ -1.25
FDFT1-224ENST00000618539 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
FDFT1-224ENST00000618539 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
FDFT1-224ENST00000618539 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
FDFT1-224ENST00000618539 MT1HP80294 61 aa7.07□□□□□ -1.28
FDFT1-224ENST00000618539 SPRR5A0A1B0GTR4 108 aa7.02□□□□□ -1.29
FDFT1-224ENST00000618539 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
FDFT1-224ENST00000618539 INE1O15225 51 aa6.94□□□□□ -1.3
FDFT1-224ENST00000618539 M0R2T5 61 aa6.9□□□□□ -1.3
FDFT1-224ENST00000618539 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
FDFT1-224ENST00000618539 TNP1P09430 55 aa6.78□□□□□ -1.32
FDFT1-224ENST00000618539 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
FDFT1-224ENST00000618539 MT2AP02795 61 aa6.73□□□□□ -1.33
FDFT1-224ENST00000618539 MT1FP04733 61 aa6.68□□□□□ -1.34
FDFT1-224ENST00000618539 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
FDFT1-224ENST00000618539 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
FDFT1-224ENST00000618539 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
FDFT1-224ENST00000618539 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
FDFT1-224ENST00000618539 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
FDFT1-224ENST00000618539 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
FDFT1-224ENST00000618539 LCE2BO14633 110 aa6.39□□□□□ -1.39
FDFT1-224ENST00000618539 KRTAP19-8Q3LI54 63 aa6.38□□□□□ -1.39
FDFT1-224ENST00000618539 USH2AO75445 5202 aa6.31□□□□□ -1.4
FDFT1-224ENST00000618539 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
FDFT1-224ENST00000618539 MT1BP07438 61 aa6.28□□□□□ -1.4
FDFT1-224ENST00000618539 KRTAP8-1Q8IUC2 63 aa6.16□□□□□ -1.42
FDFT1-224ENST00000618539 FSIP2Q5CZC0 6907 aa6.15□□□□□ -1.42
FDFT1-224ENST00000618539 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
FDFT1-224ENST00000618539 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
FDFT1-224ENST00000618539 KRTAP10-12P60413 245 aa6.09□□□□□ -1.44
FDFT1-224ENST00000618539 MT1XP80297 61 aa6.06□□□□□ -1.44
FDFT1-224ENST00000618539 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
FDFT1-224ENST00000618539 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
FDFT1-224ENST00000618539 KRTAP12-3P60328 96 aa6.02□□□□□ -1.44
FDFT1-224ENST00000618539 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
FDFT1-224ENST00000618539 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
FDFT1-224ENST00000618539 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
FDFT1-224ENST00000618539 KMT2DO14686 5537 aa5.85□□□□□ -1.47
FDFT1-224ENST00000618539 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
FDFT1-224ENST00000618539 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
FDFT1-224ENST00000618539 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
FDFT1-224ENST00000618539 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
FDFT1-224ENST00000618539 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
FDFT1-224ENST00000618539 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
FDFT1-224ENST00000618539 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
FDFT1-224ENST00000618539 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms