RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 LINC00304Q8N9R0 145 aa6.94□□□□□ -1.3
SRRT-216ENST00000618262 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
SRRT-216ENST00000618262 Q96NJ1 140 aa6.9□□□□□ -1.3
SRRT-216ENST00000618262 KRTAP1-4P0C5Y4 121 aa6.89□□□□□ -1.31
SRRT-216ENST00000618262 SPINK6Q6UWN8 80 aa6.89□□□□□ -1.31
SRRT-216ENST00000618262 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
SRRT-216ENST00000618262 FAT3Q8TDW7 4589 aa6.87□□□□□ -1.31
SRRT-216ENST00000618262 KRTAP13-2Q52LG2 175 aa6.86□□□□□ -1.31
SRRT-216ENST00000618262 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
SRRT-216ENST00000618262 HERC1Q15751 4861 aa6.85□□□□□ -1.31
SRRT-216ENST00000618262 IGFL1Q6UW32 110 aa6.84□□□□□ -1.31
SRRT-216ENST00000618262 TYMSOSQ8TAI1 123 aa6.83□□□□□ -1.32
SRRT-216ENST00000618262 TNXBP22105 4242 aa6.8□□□□□ -1.32
SRRT-216ENST00000618262 SPRR1BP22528 89 aa6.75□□□□□ -1.33
SRRT-216ENST00000618262 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
SRRT-216ENST00000618262 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
SRRT-216ENST00000618262 LPAP08519 4548 aa6.68□□□□□ -1.34
SRRT-216ENST00000618262 H0YAA0 97 aa6.65□□□□□ -1.34
SRRT-216ENST00000618262 MRPL34Q9BQ48 92 aaKnown RBP6.65□□□□□ -1.35
SRRT-216ENST00000618262 TPRXLQ17RH7 258 aa6.61□□□□□ -1.35
SRRT-216ENST00000618262 LRP2P98164 4655 aa6.59□□□□□ -1.35
SRRT-216ENST00000618262 SPINK1P00995 79 aa6.58□□□□□ -1.36
SRRT-216ENST00000618262 C9orf92A6NGG3 77 aa6.57□□□□□ -1.36
SRRT-216ENST00000618262 A0A1B0GU33 70 aa6.55□□□□□ -1.36
SRRT-216ENST00000618262 KRTAP13-3Q3SY46 172 aa6.54□□□□□ -1.36
SRRT-216ENST00000618262 MUC2Q02817 5179 aa6.53□□□□□ -1.36
SRRT-216ENST00000618262 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.36
SRRT-216ENST00000618262 RNF213Q63HN8 5207 aa6.5□□□□□ -1.37
SRRT-216ENST00000618262 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
SRRT-216ENST00000618262 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
SRRT-216ENST00000618262 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
SRRT-216ENST00000618262 H1FX-AS1Q4G0G2 97 aa6.39□□□□□ -1.39
SRRT-216ENST00000618262 IGKV2-30P06310 120 aa6.38□□□□□ -1.39
SRRT-216ENST00000618262 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
SRRT-216ENST00000618262 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
SRRT-216ENST00000618262 IGKV2D-30A0A075B6S6 120 aa6.32□□□□□ -1.4
SRRT-216ENST00000618262 XP32Q5T750 250 aa6.3□□□□□ -1.4
SRRT-216ENST00000618262 R4GN34 69 aa6.3□□□□□ -1.4
SRRT-216ENST00000618262 RPL37P61927 97 aaKnown RBP6.24□□□□□ -1.41
SRRT-216ENST00000618262 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.42
SRRT-216ENST00000618262 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
SRRT-216ENST00000618262 COX6B2Q6YFQ2 88 aa6.16□□□□□ -1.42
SRRT-216ENST00000618262 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
SRRT-216ENST00000618262 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
SRRT-216ENST00000618262 A0A0D9SG42 100 aa6□□□□□ -1.45
SRRT-216ENST00000618262 S4R3F8 94 aa5.94□□□□□ -1.46
SRRT-216ENST00000618262 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
SRRT-216ENST00000618262 INE1O15225 51 aa5.88□□□□□ -1.47
SRRT-216ENST00000618262 KRTAP13-4Q3LI77 160 aa5.87□□□□□ -1.47
SRRT-216ENST00000618262 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
SRRT-216ENST00000618262 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
SRRT-216ENST00000618262 KRTAP19-2Q3LHN2 52 aa5.8□□□□□ -1.48
SRRT-216ENST00000618262 M0R2T5 61 aa5.79□□□□□ -1.48
SRRT-216ENST00000618262 LCE2CQ5TA81 110 aa5.77□□□□□ -1.49
SRRT-216ENST00000618262 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
SRRT-216ENST00000618262 FLGP20930 4061 aaPredicted RBP5.74□□□□□ -1.49
SRRT-216ENST00000618262 MT1HP80294 61 aa5.7□□□□□ -1.5
SRRT-216ENST00000618262 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
SRRT-216ENST00000618262 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
SRRT-216ENST00000618262 KRTAP3-3Q9BYR6 98 aa5.59□□□□□ -1.51
SRRT-216ENST00000618262 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
SRRT-216ENST00000618262 USH2AO75445 5202 aa5.53□□□□□ -1.52
SRRT-216ENST00000618262 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
SRRT-216ENST00000618262 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.53
SRRT-216ENST00000618262 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
SRRT-216ENST00000618262 KRTAP10-10P60014 251 aa5.45□□□□□ -1.54
SRRT-216ENST00000618262 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
SRRT-216ENST00000618262 MT1FP04733 61 aa5.43□□□□□ -1.54
SRRT-216ENST00000618262 MT2AP02795 61 aa5.42□□□□□ -1.54
SRRT-216ENST00000618262 M0QZ58 72 aa5.38□□□□□ -1.55
SRRT-216ENST00000618262 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
SRRT-216ENST00000618262 LCE2BO14633 110 aa5.2□□□□□ -1.58
SRRT-216ENST00000618262 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
SRRT-216ENST00000618262 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
SRRT-216ENST00000618262 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
SRRT-216ENST00000618262 SPRR2GQ9BYE4 73 aa5.08□□□□□ -1.6
SRRT-216ENST00000618262 MT1BP07438 61 aa5.03□□□□□ -1.6
SRRT-216ENST00000618262 KMT2DO14686 5537 aa5.01□□□□□ -1.61
SRRT-216ENST00000618262 LCE2DQ5TA82 110 aaPredicted RBP5.01□□□□□ -1.61
SRRT-216ENST00000618262 FCGBPQ9Y6R7 5405 aaPredicted RBP4.98□□□□□ -1.61
SRRT-216ENST00000618262 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
SRRT-216ENST00000618262 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
SRRT-216ENST00000618262 MACF1Q9UPN3 7388 aaKnown RBP4.91□□□□□ -1.62
SRRT-216ENST00000618262 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
SRRT-216ENST00000618262 TNP1P09430 55 aa4.86□□□□□ -1.63
SRRT-216ENST00000618262 MT1XP80297 61 aa4.83□□□□□ -1.64
SRRT-216ENST00000618262 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
SRRT-216ENST00000618262 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
SRRT-216ENST00000618262 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
SRRT-216ENST00000618262 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
SRRT-216ENST00000618262 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
SRRT-216ENST00000618262 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
SRRT-216ENST00000618262 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
SRRT-216ENST00000618262 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
SRRT-216ENST00000618262 MDN1Q9NU22 5596 aa4.57□□□□□ -1.68
SRRT-216ENST00000618262 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
SRRT-216ENST00000618262 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
SRRT-216ENST00000618262 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
SRRT-216ENST00000618262 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
SRRT-216ENST00000618262 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms