RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 COX6B2Q6YFQ2 88 aa11.36□□□□□ -0.59
CLN5-203ENST00000616833 MIR22HGQ0VDD5 57 aa11.31□□□□□ -0.6
CLN5-203ENST00000616833 UQCR11O14957 56 aa11.31□□□□□ -0.6
CLN5-203ENST00000616833 A6NN06 94 aa11.29□□□□□ -0.6
CLN5-203ENST00000616833 SEC61GP60059 68 aa11.29□□□□□ -0.6
CLN5-203ENST00000616833 SPATA8Q6RVD6 105 aa11.25□□□□□ -0.61
CLN5-203ENST00000616833 H0YAA0 97 aa11.11□□□□□ -0.63
CLN5-203ENST00000616833 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
CLN5-203ENST00000616833 KTN1-AS1Q86SY8 53 aa11.1□□□□□ -0.63
CLN5-203ENST00000616833 A0A1B0GU33 70 aa11.08□□□□□ -0.64
CLN5-203ENST00000616833 H1FX-AS1Q4G0G2 97 aa11.04□□□□□ -0.64
CLN5-203ENST00000616833 TPRXLQ17RH7 258 aa11.03□□□□□ -0.64
CLN5-203ENST00000616833 ADM2Q7Z4H4 148 aa11.03□□□□□ -0.64
CLN5-203ENST00000616833 S4R3F8 94 aa11.03□□□□□ -0.64
CLN5-203ENST00000616833 HERC2O95714 4834 aa11.02□□□□□ -0.65
CLN5-203ENST00000616833 PRAC1Q96KF2 57 aa10.98□□□□□ -0.65
CLN5-203ENST00000616833 J3QL48 77 aa10.92□□□□□ -0.66
CLN5-203ENST00000616833 BIRC6Q9NR09 4857 aa10.92□□□□□ -0.66
CLN5-203ENST00000616833 KRTAP10-6P60371 365 aaPredicted RBP10.9□□□□□ -0.67
CLN5-203ENST00000616833 KRTAP3-2Q9BYR7 98 aa10.85□□□□□ -0.67
CLN5-203ENST00000616833 P0C880 135 aa10.84□□□□□ -0.67
CLN5-203ENST00000616833 KRTAP13-4Q3LI77 160 aa10.84□□□□□ -0.67
CLN5-203ENST00000616833 A0A0D9SG42 100 aa10.81□□□□□ -0.68
CLN5-203ENST00000616833 RBM12B-AS1Q9P1G2 102 aa10.81□□□□□ -0.68
CLN5-203ENST00000616833 KRTAP4-1Q9BYQ7 146 aa10.74□□□□□ -0.69
CLN5-203ENST00000616833 MUC17Q685J3 4493 aa10.74□□□□□ -0.69
CLN5-203ENST00000616833 PCLOQ9Y6V0 5065 aa10.72□□□□□ -0.69
CLN5-203ENST00000616833 MUC2Q02817 5179 aa10.71□□□□□ -0.7
CLN5-203ENST00000616833 SEC61BP60468 96 aaKnown RBP10.64□□□□□ -0.71
CLN5-203ENST00000616833 CSAG1Q6PB30 78 aa10.64□□□□□ -0.71
CLN5-203ENST00000616833 HERC1Q15751 4861 aa10.63□□□□□ -0.71
CLN5-203ENST00000616833 CRIPTQ9P021 101 aa10.57□□□□□ -0.72
CLN5-203ENST00000616833 K7ERS5 55 aa10.53□□□□□ -0.72
CLN5-203ENST00000616833 KRTAP12-2P59991 146 aa10.44□□□□□ -0.74
CLN5-203ENST00000616833 SPINT4Q6UDR6 99 aa10.42□□□□□ -0.74
CLN5-203ENST00000616833 LINC01554Q52M75 96 aa10.39□□□□□ -0.75
CLN5-203ENST00000616833 LORP23490 312 aaPredicted RBP10.35□□□□□ -0.75
CLN5-203ENST00000616833 KRTAP19-2Q3LHN2 52 aa10.35□□□□□ -0.75
CLN5-203ENST00000616833 HMCN2Q8NDA2 5059 aa10.34□□□□□ -0.75
CLN5-203ENST00000616833 M0QZ58 72 aa10.32□□□□□ -0.76
CLN5-203ENST00000616833 KRTAP12-1P59990 96 aa10.31□□□□□ -0.76
CLN5-203ENST00000616833 ROMO1P60602 79 aa10.3□□□□□ -0.76
CLN5-203ENST00000616833 KRTAP25-1Q3LHN0 102 aa10.26□□□□□ -0.77
CLN5-203ENST00000616833 R4GN34 69 aa10.25□□□□□ -0.77
CLN5-203ENST00000616833 FAT4Q6V0I7 4981 aa10.21□□□□□ -0.78
CLN5-203ENST00000616833 C10orf95Q9H7T3 257 aa10.16□□□□□ -0.78
CLN5-203ENST00000616833 RNF213Q63HN8 5207 aa10.11□□□□□ -0.79
CLN5-203ENST00000616833 FLGP20930 4061 aaPredicted RBP10.11□□□□□ -0.79
CLN5-203ENST00000616833 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
CLN5-203ENST00000616833 LCE2CQ5TA81 110 aa9.9□□□□□ -0.82
CLN5-203ENST00000616833 M0R2T5 61 aa9.78□□□□□ -0.84
CLN5-203ENST00000616833 CAMK2N1Q7Z7J9 78 aa9.72□□□□□ -0.85
CLN5-203ENST00000616833 MT1HP80294 61 aa9.67□□□□□ -0.86
CLN5-203ENST00000616833 MT1FP04733 61 aa9.47□□□□□ -0.89
CLN5-203ENST00000616833 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
CLN5-203ENST00000616833 KRTAP10-10P60014 251 aa9.46□□□□□ -0.89
CLN5-203ENST00000616833 MT2AP02795 61 aa9.44□□□□□ -0.9
CLN5-203ENST00000616833 SPRR2GQ9BYE4 73 aa9.38□□□□□ -0.91
CLN5-203ENST00000616833 KRTAP9-8Q9BYQ0 159 aa9.38□□□□□ -0.91
CLN5-203ENST00000616833 PLAC4Q8WY50 150 aa9.3□□□□□ -0.92
CLN5-203ENST00000616833 KRTAP15-1Q3LI76 137 aa9.26□□□□□ -0.93
CLN5-203ENST00000616833 TNP1P09430 55 aa9.21□□□□□ -0.94
CLN5-203ENST00000616833 PP632Q6XCG6 107 aa9.06□□□□□ -0.96
CLN5-203ENST00000616833 MT1BP07438 61 aa9.03□□□□□ -0.96
CLN5-203ENST00000616833 NDUFAF8A1L188 74 aa9.02□□□□□ -0.96
CLN5-203ENST00000616833 KRTAP19-8Q3LI54 63 aa9□□□□□ -0.97
CLN5-203ENST00000616833 KRTAP9-3Q9BYQ3 159 aa8.98□□□□□ -0.97
CLN5-203ENST00000616833 H3BS24 57 aa8.97□□□□□ -0.97
CLN5-203ENST00000616833 USH2AO75445 5202 aa8.92□□□□□ -0.98
CLN5-203ENST00000616833 LCE3AQ5TA76 89 aa8.9□□□□□ -0.99
CLN5-203ENST00000616833 KRTAP10-5P60370 271 aa8.89□□□□□ -0.99
CLN5-203ENST00000616833 MT1XP80297 61 aa8.89□□□□□ -0.99
CLN5-203ENST00000616833 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
CLN5-203ENST00000616833 LCE2BO14633 110 aa8.77□□□□□ -1.01
CLN5-203ENST00000616833 KRTAP23-1A1A580 65 aa8.75□□□□□ -1.01
CLN5-203ENST00000616833 KRTAP10-7P60409 375 aaPredicted RBP8.71□□□□□ -1.02
CLN5-203ENST00000616833 KMT2DO14686 5537 aa8.6□□□□□ -1.03
CLN5-203ENST00000616833 KRTAP10-12P60413 245 aa8.59□□□□□ -1.03
CLN5-203ENST00000616833 LUZP6Q538Z0 58 aa8.5□□□□□ -1.05
CLN5-203ENST00000616833 KRTAP8-1Q8IUC2 63 aa8.49□□□□□ -1.05
CLN5-203ENST00000616833 PRO2289Q9P1D8 64 aa8.49□□□□□ -1.05
CLN5-203ENST00000616833 KRTAP12-3P60328 96 aa8.41□□□□□ -1.06
CLN5-203ENST00000616833 FSIP2Q5CZC0 6907 aa8.4□□□□□ -1.07
CLN5-203ENST00000616833 SPRR5A0A1B0GTR4 108 aa8.37□□□□□ -1.07
CLN5-203ENST00000616833 KRTAP4-8A0A0G2JLE6 195 aa8.33□□□□□ -1.08
CLN5-203ENST00000616833 KRTAP4-8Q9BYQ9 185 aa8.33□□□□□ -1.08
CLN5-203ENST00000616833 KRTAP19-5Q3LI72 72 aa8.25□□□□□ -1.09
CLN5-203ENST00000616833 SSPOA2VEC9 5147 aa8.22□□□□□ -1.09
CLN5-203ENST00000616833 KRTAP19-7Q3SYF9 63 aa7.92□□□□□ -1.14
CLN5-203ENST00000616833 LCE3CQ5T5A8 94 aa7.88□□□□□ -1.15
CLN5-203ENST00000616833 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
CLN5-203ENST00000616833 KRTAP19-6Q3LI70 58 aa7.81□□□□□ -1.16
CLN5-203ENST00000616833 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
CLN5-203ENST00000616833 FCGBPQ9Y6R7 5405 aaPredicted RBP7.72□□□□□ -1.17
CLN5-203ENST00000616833 LCE2DQ5TA82 110 aaPredicted RBP7.72□□□□□ -1.17
CLN5-203ENST00000616833 MT1EP04732 61 aa7.7□□□□□ -1.18
CLN5-203ENST00000616833 KRTAP9-6A8MVA2 160 aa7.69□□□□□ -1.18
CLN5-203ENST00000616833 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.18
CLN5-203ENST00000616833 MT1LQ93083 61 aa7.64□□□□□ -1.19
CLN5-203ENST00000616833 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms