RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CRIPTQ9P021 101 aa9.03□□□□□ -0.96
TRAPPC3-208ENST00000616074 K7EP34 96 aa9□□□□□ -0.97
TRAPPC3-208ENST00000616074 PCP4P48539 62 aa8.94□□□□□ -0.98
TRAPPC3-208ENST00000616074 COL5A1-AS1Q5SY13 56 aa8.94□□□□□ -0.98
TRAPPC3-208ENST00000616074 TRAV22A0A0B4J277 110 aa8.92□□□□□ -0.98
TRAPPC3-208ENST00000616074 LOC101927531A0A1B0GV80 90 aa8.91□□□□□ -0.98
TRAPPC3-208ENST00000616074 H0YAA0 97 aa8.85□□□□□ -0.99
TRAPPC3-208ENST00000616074 NDUFC1O43677 76 aa8.83□□□□□ -1
TRAPPC3-208ENST00000616074 ETDBQ3ZM63 59 aa8.83□□□□□ -1
TRAPPC3-208ENST00000616074 F8W1H4 67 aa8.8□□□□□ -1
TRAPPC3-208ENST00000616074 GTF2H5Q6ZYL4 71 aa8.8□□□□□ -1
TRAPPC3-208ENST00000616074 KRTAP2-3P0C7H8 128 aa8.78□□□□□ -1
TRAPPC3-208ENST00000616074 SPRR2FQ96RM1 72 aa8.78□□□□□ -1
TRAPPC3-208ENST00000616074 KRTAP2-4Q9BYR9 128 aa8.78□□□□□ -1
TRAPPC3-208ENST00000616074 ADM2Q7Z4H4 148 aa8.77□□□□□ -1.01
TRAPPC3-208ENST00000616074 A0A1B0GV90 55 aa8.76□□□□□ -1.01
TRAPPC3-208ENST00000616074 A8MUN3 132 aa8.76□□□□□ -1.01
TRAPPC3-208ENST00000616074 MT1XP80297 61 aa8.75□□□□□ -1.01
TRAPPC3-208ENST00000616074 H0Y9P7 68 aa8.74□□□□□ -1.01
TRAPPC3-208ENST00000616074 PRO2289Q9P1D8 64 aa8.74□□□□□ -1.01
TRAPPC3-208ENST00000616074 UQCRQO14949 82 aa8.73□□□□□ -1.01
TRAPPC3-208ENST00000616074 SPRR2EP22531 72 aa8.73□□□□□ -1.01
TRAPPC3-208ENST00000616074 SPRR2BP35325 72 aa8.73□□□□□ -1.01
TRAPPC3-208ENST00000616074 SPRR2AP35326 72 aa8.73□□□□□ -1.01
TRAPPC3-208ENST00000616074 ATOX1O00244 68 aa8.71□□□□□ -1.02
TRAPPC3-208ENST00000616074 ACYP1P07311 99 aa8.7□□□□□ -1.02
TRAPPC3-208ENST00000616074 HIST1H4AP62805 103 aaKnown RBP8.67□□□□□ -1.02
TRAPPC3-208ENST00000616074 ATP5EP2Q5VTU8 51 aa8.64□□□□□ -1.03
TRAPPC3-208ENST00000616074 KRTAP8-1Q8IUC2 63 aa8.64□□□□□ -1.03
TRAPPC3-208ENST00000616074 PLAC4Q8WY50 150 aa8.64□□□□□ -1.03
TRAPPC3-208ENST00000616074 FAM240AA0A1B0GVK7 77 aa8.57□□□□□ -1.04
TRAPPC3-208ENST00000616074 KRTAP12-2P59991 146 aa8.57□□□□□ -1.04
TRAPPC3-208ENST00000616074 LCE1AQ5T7P2 110 aa8.57□□□□□ -1.04
TRAPPC3-208ENST00000616074 LINC00208Q96KT6 92 aa8.57□□□□□ -1.04
TRAPPC3-208ENST00000616074 R4GN34 69 aa8.56□□□□□ -1.04
TRAPPC3-208ENST00000616074 P0C880 135 aa8.54□□□□□ -1.04
TRAPPC3-208ENST00000616074 M0QZ58 72 aa8.49□□□□□ -1.05
TRAPPC3-208ENST00000616074 KRTAP2-2Q9BYT5 123 aa8.49□□□□□ -1.05
TRAPPC3-208ENST00000616074 KRTAP2-1Q9BYU5 128 aa8.49□□□□□ -1.05
TRAPPC3-208ENST00000616074 KRTAP4-8A0A0G2JLE6 195 aa8.48□□□□□ -1.05
TRAPPC3-208ENST00000616074 KRTAP4-8Q9BYQ9 185 aa8.48□□□□□ -1.05
TRAPPC3-208ENST00000616074 C20orf197Q8N268 126 aa8.46□□□□□ -1.06
TRAPPC3-208ENST00000616074 MP68P56378 58 aa8.45□□□□□ -1.06
TRAPPC3-208ENST00000616074 SPRR2DP22532 72 aa8.44□□□□□ -1.06
TRAPPC3-208ENST00000616074 OCR1Q9BZK8 76 aa8.44□□□□□ -1.06
TRAPPC3-208ENST00000616074 LINC00643Q86TS7 51 aa8.42□□□□□ -1.06
TRAPPC3-208ENST00000616074 LINC01554Q52M75 96 aa8.39□□□□□ -1.07
TRAPPC3-208ENST00000616074 SCGB1A1P11684 91 aa8.35□□□□□ -1.07
TRAPPC3-208ENST00000616074 KRTAP10-7P60409 375 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC3-208ENST00000616074 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
TRAPPC3-208ENST00000616074 K7ERU9 68 aa8.3□□□□□ -1.08
TRAPPC3-208ENST00000616074 KRTAP10-12P60413 245 aa8.29□□□□□ -1.08
TRAPPC3-208ENST00000616074 H3BPC8 53 aa8.28□□□□□ -1.08
TRAPPC3-208ENST00000616074 LCE3BQ5TA77 95 aa8.24□□□□□ -1.09
TRAPPC3-208ENST00000616074 TRAV7A0A075B6U4 112 aa8.14□□□□□ -1.11
TRAPPC3-208ENST00000616074 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
TRAPPC3-208ENST00000616074 ACYP2P14621 99 aa8.06□□□□□ -1.12
TRAPPC3-208ENST00000616074 J3QR89 54 aa8.01□□□□□ -1.13
TRAPPC3-208ENST00000616074 SPTSSBQ8NFR3 76 aa8.01□□□□□ -1.13
TRAPPC3-208ENST00000616074 CHKB-CPT1BH3BT56 60 aa7.92□□□□□ -1.14
TRAPPC3-208ENST00000616074 DSTQ03001 7570 aaKnown RBP7.9□□□□□ -1.15
TRAPPC3-208ENST00000616074 GPR98Q8WXG9 6306 aa7.89□□□□□ -1.15
TRAPPC3-208ENST00000616074 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
TRAPPC3-208ENST00000616074 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
TRAPPC3-208ENST00000616074 LCE5AQ5TCM9 118 aa7.83□□□□□ -1.16
TRAPPC3-208ENST00000616074 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
TRAPPC3-208ENST00000616074 KRTAP19-7Q3SYF9 63 aa7.82□□□□□ -1.16
TRAPPC3-208ENST00000616074 CAMK2N1Q7Z7J9 78 aa7.82□□□□□ -1.16
TRAPPC3-208ENST00000616074 SMIM20Q8N5G0 67 aa7.79□□□□□ -1.16
TRAPPC3-208ENST00000616074 MT1EP04732 61 aa7.77□□□□□ -1.17
TRAPPC3-208ENST00000616074 KRTAP19-3Q7Z4W3 81 aa7.76□□□□□ -1.17
TRAPPC3-208ENST00000616074 ANAPC13Q9BS18 74 aa7.76□□□□□ -1.17
TRAPPC3-208ENST00000616074 KRTAP4-9Q9BYQ8 210 aa7.76□□□□□ -1.17
TRAPPC3-208ENST00000616074 SNURFQ9Y675 71 aa7.73□□□□□ -1.17
TRAPPC3-208ENST00000616074 SPANXA2-OT1Q8N9U9 137 aa7.65□□□□□ -1.18
TRAPPC3-208ENST00000616074 CYSTM1Q9H1C7 97 aa7.6□□□□□ -1.19
TRAPPC3-208ENST00000616074 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
TRAPPC3-208ENST00000616074 A0A0D9SG42 100 aa7.57□□□□□ -1.2
TRAPPC3-208ENST00000616074 KRTAP19-5Q3LI72 72 aa7.54□□□□□ -1.2
TRAPPC3-208ENST00000616074 LCE1DQ5T752 114 aa7.54□□□□□ -1.2
TRAPPC3-208ENST00000616074 MT1GP13640 62 aa7.53□□□□□ -1.2
TRAPPC3-208ENST00000616074 CCDC179H3BU77 68 aa7.49□□□□□ -1.21
TRAPPC3-208ENST00000616074 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
TRAPPC3-208ENST00000616074 HMCN1Q96RW7 5635 aa7.49□□□□□ -1.21
TRAPPC3-208ENST00000616074 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
TRAPPC3-208ENST00000616074 COA5Q86WW8 74 aa7.48□□□□□ -1.21
TRAPPC3-208ENST00000616074 PP632Q6XCG6 107 aa7.45□□□□□ -1.22
TRAPPC3-208ENST00000616074 SERP1Q9Y6X1 66 aa7.45□□□□□ -1.22
TRAPPC3-208ENST00000616074 SEC61GP60059 68 aa7.44□□□□□ -1.22
TRAPPC3-208ENST00000616074 SERP2Q8N6R1 65 aa7.43□□□□□ -1.22
TRAPPC3-208ENST00000616074 MT4P47944 62 aa7.42□□□□□ -1.22
TRAPPC3-208ENST00000616074 LCE4AQ5TA78 99 aa7.42□□□□□ -1.22
TRAPPC3-208ENST00000616074 MT1MQ8N339 61 aa7.42□□□□□ -1.22
TRAPPC3-208ENST00000616074 KRTAP12-1P59990 96 aa7.4□□□□□ -1.22
TRAPPC3-208ENST00000616074 PRO0628Q9UI54 55 aa7.38□□□□□ -1.23
TRAPPC3-208ENST00000616074 A0A1B0GU33 70 aa7.37□□□□□ -1.23
TRAPPC3-208ENST00000616074 MT1LQ93083 61 aa7.37□□□□□ -1.23
TRAPPC3-208ENST00000616074 TMEM258P61165 79 aa7.33□□□□□ -1.24
TRAPPC3-208ENST00000616074 V9GYY9 64 aa7.33□□□□□ -1.24
TRAPPC3-208ENST00000616074 AHNAK2Q8IVF2 5795 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms