RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
MMP28-204ENST00000615136 SPATA8Q6RVD6 105 aa10.06□□□□□ -0.8
MMP28-204ENST00000615136 UQCR11O14957 56 aa10.05□□□□□ -0.8
MMP28-204ENST00000615136 KTN1-AS1Q86SY8 53 aa10.04□□□□□ -0.8
MMP28-204ENST00000615136 PCLOQ9Y6V0 5065 aa10.03□□□□□ -0.8
MMP28-204ENST00000615136 LPAP08519 4548 aa10□□□□□ -0.81
MMP28-204ENST00000615136 MIR22HGQ0VDD5 57 aa10□□□□□ -0.81
MMP28-204ENST00000615136 LRP2P98164 4655 aa9.98□□□□□ -0.81
MMP28-204ENST00000615136 COX6B2Q6YFQ2 88 aa9.95□□□□□ -0.82
MMP28-204ENST00000615136 J3QL48 77 aa9.92□□□□□ -0.82
MMP28-204ENST00000615136 TPRXLQ17RH7 258 aa9.9□□□□□ -0.82
MMP28-204ENST00000615136 RBM12B-AS1Q9P1G2 102 aa9.85□□□□□ -0.83
MMP28-204ENST00000615136 H0YAA0 97 aa9.76□□□□□ -0.85
MMP28-204ENST00000615136 A0A1B0GU33 70 aa9.73□□□□□ -0.85
MMP28-204ENST00000615136 H1FX-AS1Q4G0G2 97 aa9.73□□□□□ -0.85
MMP28-204ENST00000615136 HERC1Q15751 4861 aa9.71□□□□□ -0.86
MMP28-204ENST00000615136 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
MMP28-204ENST00000615136 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
MMP28-204ENST00000615136 S4R3F8 94 aa9.6□□□□□ -0.87
MMP28-204ENST00000615136 PRAC1Q96KF2 57 aa9.58□□□□□ -0.88
MMP28-204ENST00000615136 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
MMP28-204ENST00000615136 KRTAP10-6P60371 365 aaPredicted RBP9.54□□□□□ -0.88
MMP28-204ENST00000615136 KRTAP4-1Q9BYQ7 146 aa9.54□□□□□ -0.88
MMP28-204ENST00000615136 SEC61BP60468 96 aaKnown RBP9.51□□□□□ -0.89
MMP28-204ENST00000615136 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
MMP28-204ENST00000615136 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.9
MMP28-204ENST00000615136 MUC2Q02817 5179 aa9.39□□□□□ -0.91
MMP28-204ENST00000615136 KRTAP13-4Q3LI77 160 aa9.39□□□□□ -0.91
MMP28-204ENST00000615136 K7ERS5 55 aa9.37□□□□□ -0.91
MMP28-204ENST00000615136 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
MMP28-204ENST00000615136 P0C880 135 aa9.34□□□□□ -0.91
MMP28-204ENST00000615136 LINC01554Q52M75 96 aa9.32□□□□□ -0.92
MMP28-204ENST00000615136 KRTAP19-2Q3LHN2 52 aa9.29□□□□□ -0.92
MMP28-204ENST00000615136 A0A0D9SG42 100 aa9.22□□□□□ -0.93
MMP28-204ENST00000615136 H3BS24 57 aa9.19□□□□□ -0.94
MMP28-204ENST00000615136 UBR4Q5T4S7 5183 aa9.17□□□□□ -0.94
MMP28-204ENST00000615136 KRTAP25-1Q3LHN0 102 aa9.17□□□□□ -0.94
MMP28-204ENST00000615136 ROMO1P60602 79 aa9.14□□□□□ -0.95
MMP28-204ENST00000615136 M0QZ58 72 aa9.09□□□□□ -0.95
MMP28-204ENST00000615136 KRTAP12-2P59991 146 aa9.06□□□□□ -0.96
MMP28-204ENST00000615136 FLGP20930 4061 aaPredicted RBP9.04□□□□□ -0.96
MMP28-204ENST00000615136 KRTAP12-1P59990 96 aa9.04□□□□□ -0.96
MMP28-204ENST00000615136 RNF213Q63HN8 5207 aa9.03□□□□□ -0.96
MMP28-204ENST00000615136 FAT4Q6V0I7 4981 aa8.99□□□□□ -0.97
MMP28-204ENST00000615136 CRIPTQ9P021 101 aa8.98□□□□□ -0.97
MMP28-204ENST00000615136 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
MMP28-204ENST00000615136 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
MMP28-204ENST00000615136 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
MMP28-204ENST00000615136 R4GN34 69 aa8.87□□□□□ -0.99
MMP28-204ENST00000615136 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
MMP28-204ENST00000615136 MT1HP80294 61 aa8.7□□□□□ -1.02
MMP28-204ENST00000615136 M0R2T5 61 aa8.6□□□□□ -1.03
MMP28-204ENST00000615136 MT2AP02795 61 aa8.44□□□□□ -1.06
MMP28-204ENST00000615136 KRTAP9-8Q9BYQ0 159 aa8.44□□□□□ -1.06
MMP28-204ENST00000615136 MT1FP04733 61 aa8.43□□□□□ -1.06
MMP28-204ENST00000615136 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
MMP28-204ENST00000615136 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
MMP28-204ENST00000615136 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
MMP28-204ENST00000615136 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
MMP28-204ENST00000615136 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
MMP28-204ENST00000615136 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
MMP28-204ENST00000615136 PP632Q6XCG6 107 aa8.2□□□□□ -1.1
MMP28-204ENST00000615136 PLAC4Q8WY50 150 aa8.1□□□□□ -1.11
MMP28-204ENST00000615136 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
MMP28-204ENST00000615136 TNP1P09430 55 aa8.08□□□□□ -1.12
MMP28-204ENST00000615136 KRTAP19-8Q3LI54 63 aa8.08□□□□□ -1.12
MMP28-204ENST00000615136 MT1BP07438 61 aa8.04□□□□□ -1.12
MMP28-204ENST00000615136 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
MMP28-204ENST00000615136 NDUFAF8A1L188 74 aa8.02□□□□□ -1.13
MMP28-204ENST00000615136 LCE2BO14633 110 aa7.88□□□□□ -1.15
MMP28-204ENST00000615136 MT1XP80297 61 aa7.85□□□□□ -1.15
MMP28-204ENST00000615136 KRTAP10-5P60370 271 aa7.85□□□□□ -1.15
MMP28-204ENST00000615136 A0A0A0MQY5 61 aa7.83□□□□□ -1.16
MMP28-204ENST00000615136 USH2AO75445 5202 aa7.81□□□□□ -1.16
MMP28-204ENST00000615136 LCE3AQ5TA76 89 aa7.67□□□□□ -1.18
MMP28-204ENST00000615136 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
MMP28-204ENST00000615136 KRTAP10-7P60409 375 aaPredicted RBP7.6□□□□□ -1.19
MMP28-204ENST00000615136 LUZP6Q538Z0 58 aa7.6□□□□□ -1.19
MMP28-204ENST00000615136 FSIP2Q5CZC0 6907 aa7.57□□□□□ -1.2
MMP28-204ENST00000615136 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
MMP28-204ENST00000615136 PRO2289Q9P1D8 64 aa7.54□□□□□ -1.2
MMP28-204ENST00000615136 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
MMP28-204ENST00000615136 KRTAP10-12P60413 245 aa7.49□□□□□ -1.21
MMP28-204ENST00000615136 KRTAP9-2Q9BYQ4 174 aa7.45□□□□□ -1.22
MMP28-204ENST00000615136 SSPOA2VEC9 5147 aa7.43□□□□□ -1.22
MMP28-204ENST00000615136 KMT2DO14686 5537 aa7.4□□□□□ -1.23
MMP28-204ENST00000615136 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
MMP28-204ENST00000615136 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
MMP28-204ENST00000615136 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.25
MMP28-204ENST00000615136 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
MMP28-204ENST00000615136 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
MMP28-204ENST00000615136 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
MMP28-204ENST00000615136 FCGBPQ9Y6R7 5405 aaPredicted RBP7.11□□□□□ -1.27
MMP28-204ENST00000615136 KRTAP19-7Q3SYF9 63 aa7.01□□□□□ -1.29
MMP28-204ENST00000615136 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
MMP28-204ENST00000615136 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
MMP28-204ENST00000615136 MT1EP04732 61 aa6.83□□□□□ -1.32
MMP28-204ENST00000615136 MACF1Q9UPN3 7388 aaKnown RBP6.82□□□□□ -1.32
MMP28-204ENST00000615136 MT1LQ93083 61 aa6.74□□□□□ -1.33
MMP28-204ENST00000615136 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms