RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 H0YAA0 97 aa6.51□□□□□ -1.37
PPP4R3B-204ENST00000612688 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
PPP4R3B-204ENST00000612688 KRTAP16-1A8MUX0 517 aa6.5□□□□□ -1.37
PPP4R3B-204ENST00000612688 A8MUU9 505 aa6.48□□□□□ -1.37
PPP4R3B-204ENST00000612688 KRTAP4-5Q9BYR2 181 aa6.46□□□□□ -1.37
PPP4R3B-204ENST00000612688 A0A1B0GU33 70 aa6.42□□□□□ -1.38
PPP4R3B-204ENST00000612688 P0C880 135 aa6.41□□□□□ -1.38
PPP4R3B-204ENST00000612688 FAT3Q8TDW7 4589 aa6.4□□□□□ -1.38
PPP4R3B-204ENST00000612688 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
PPP4R3B-204ENST00000612688 ABCA13Q86UQ4 5058 aa6.39□□□□□ -1.39
PPP4R3B-204ENST00000612688 TNXBP22105 4242 aa6.39□□□□□ -1.39
PPP4R3B-204ENST00000612688 HERC2O95714 4834 aa6.36□□□□□ -1.39
PPP4R3B-204ENST00000612688 A0A0D9SG42 100 aa6.36□□□□□ -1.39
PPP4R3B-204ENST00000612688 BIRC6Q9NR09 4857 aa6.35□□□□□ -1.39
PPP4R3B-204ENST00000612688 KRTAP10-8P60410 259 aa6.34□□□□□ -1.39
PPP4R3B-204ENST00000612688 K7ERS5 55 aa6.31□□□□□ -1.4
PPP4R3B-204ENST00000612688 H1FX-AS1Q4G0G2 97 aa6.31□□□□□ -1.4
PPP4R3B-204ENST00000612688 C10orf95Q9H7T3 257 aa6.3□□□□□ -1.4
PPP4R3B-204ENST00000612688 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
PPP4R3B-204ENST00000612688 NDUFAF8A1L188 74 aa6.29□□□□□ -1.4
PPP4R3B-204ENST00000612688 RPS29P62273 56 aaKnown RBP6.27□□□□□ -1.41
PPP4R3B-204ENST00000612688 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
PPP4R3B-204ENST00000612688 J3QL48 77 aa6.23□□□□□ -1.41
PPP4R3B-204ENST00000612688 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
PPP4R3B-204ENST00000612688 PCLOQ9Y6V0 5065 aa6.2□□□□□ -1.42
PPP4R3B-204ENST00000612688 LPAP08519 4548 aa6.2□□□□□ -1.42
PPP4R3B-204ENST00000612688 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
PPP4R3B-204ENST00000612688 LRP2P98164 4655 aa6.16□□□□□ -1.42
PPP4R3B-204ENST00000612688 HERC1Q15751 4861 aa6.15□□□□□ -1.42
PPP4R3B-204ENST00000612688 C20orf166-AS1Q96NR2 134 aa6.12□□□□□ -1.43
PPP4R3B-204ENST00000612688 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
PPP4R3B-204ENST00000612688 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
PPP4R3B-204ENST00000612688 XP32Q5T750 250 aa6.08□□□□□ -1.44
PPP4R3B-204ENST00000612688 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
PPP4R3B-204ENST00000612688 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
PPP4R3B-204ENST00000612688 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
PPP4R3B-204ENST00000612688 MUC2Q02817 5179 aa5.95□□□□□ -1.46
PPP4R3B-204ENST00000612688 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
PPP4R3B-204ENST00000612688 KRTAP3-3Q9BYR6 98 aa5.94□□□□□ -1.46
PPP4R3B-204ENST00000612688 S4R3F8 94 aa5.94□□□□□ -1.46
PPP4R3B-204ENST00000612688 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
PPP4R3B-204ENST00000612688 HMCN2Q8NDA2 5059 aa5.88□□□□□ -1.47
PPP4R3B-204ENST00000612688 RNF213Q63HN8 5207 aa5.82□□□□□ -1.48
PPP4R3B-204ENST00000612688 UBR4Q5T4S7 5183 aa5.82□□□□□ -1.48
PPP4R3B-204ENST00000612688 SEC61BP60468 96 aaKnown RBP5.8□□□□□ -1.48
PPP4R3B-204ENST00000612688 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
PPP4R3B-204ENST00000612688 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
PPP4R3B-204ENST00000612688 MUC17Q685J3 4493 aa5.72□□□□□ -1.49
PPP4R3B-204ENST00000612688 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
PPP4R3B-204ENST00000612688 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
PPP4R3B-204ENST00000612688 M0QZ58 72 aa5.62□□□□□ -1.51
PPP4R3B-204ENST00000612688 LORP23490 312 aaPredicted RBP5.57□□□□□ -1.52
PPP4R3B-204ENST00000612688 R4GN34 69 aa5.55□□□□□ -1.52
PPP4R3B-204ENST00000612688 KRTAP19-2Q3LHN2 52 aa5.49□□□□□ -1.53
PPP4R3B-204ENST00000612688 FLGP20930 4061 aaPredicted RBP5.45□□□□□ -1.54
PPP4R3B-204ENST00000612688 M0R2T5 61 aa5.44□□□□□ -1.54
PPP4R3B-204ENST00000612688 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.55
PPP4R3B-204ENST00000612688 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
PPP4R3B-204ENST00000612688 MT1HP80294 61 aa5.31□□□□□ -1.56
PPP4R3B-204ENST00000612688 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
PPP4R3B-204ENST00000612688 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
PPP4R3B-204ENST00000612688 MT1FP04733 61 aa5.12□□□□□ -1.59
PPP4R3B-204ENST00000612688 MT2AP02795 61 aa5.11□□□□□ -1.59
PPP4R3B-204ENST00000612688 KRTAP9-8Q9BYQ0 159 aa5.1□□□□□ -1.59
PPP4R3B-204ENST00000612688 TNP1P09430 55 aa5.07□□□□□ -1.6
PPP4R3B-204ENST00000612688 PRO2289Q9P1D8 64 aa5.04□□□□□ -1.6
PPP4R3B-204ENST00000612688 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
PPP4R3B-204ENST00000612688 USH2AO75445 5202 aa5.01□□□□□ -1.61
PPP4R3B-204ENST00000612688 LCE2AQ5TA79 106 aaPredicted RBP5□□□□□ -1.61
PPP4R3B-204ENST00000612688 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
PPP4R3B-204ENST00000612688 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
PPP4R3B-204ENST00000612688 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
PPP4R3B-204ENST00000612688 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
PPP4R3B-204ENST00000612688 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
PPP4R3B-204ENST00000612688 LCE2BO14633 110 aa4.83□□□□□ -1.64
PPP4R3B-204ENST00000612688 LCE3AQ5TA76 89 aa4.83□□□□□ -1.64
PPP4R3B-204ENST00000612688 MT1BP07438 61 aa4.81□□□□□ -1.64
PPP4R3B-204ENST00000612688 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
PPP4R3B-204ENST00000612688 KMT2DO14686 5537 aa4.76□□□□□ -1.65
PPP4R3B-204ENST00000612688 INE1O15225 51 aa4.74□□□□□ -1.65
PPP4R3B-204ENST00000612688 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
PPP4R3B-204ENST00000612688 MT1XP80297 61 aa4.67□□□□□ -1.66
PPP4R3B-204ENST00000612688 KRTAP10-5P60370 271 aa4.65□□□□□ -1.66
PPP4R3B-204ENST00000612688 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
PPP4R3B-204ENST00000612688 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
PPP4R3B-204ENST00000612688 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
PPP4R3B-204ENST00000612688 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
PPP4R3B-204ENST00000612688 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
PPP4R3B-204ENST00000612688 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
PPP4R3B-204ENST00000612688 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
PPP4R3B-204ENST00000612688 LCE2DQ5TA82 110 aaPredicted RBP4.44□□□□□ -1.7
PPP4R3B-204ENST00000612688 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
PPP4R3B-204ENST00000612688 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
PPP4R3B-204ENST00000612688 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
PPP4R3B-204ENST00000612688 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
PPP4R3B-204ENST00000612688 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
PPP4R3B-204ENST00000612688 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
PPP4R3B-204ENST00000612688 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
PPP4R3B-204ENST00000612688 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
PPP4R3B-204ENST00000612688 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms