RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 KRTAP21-3Q3LHN1 58 aa4.67□□□□□ -1.66
LINC00547-201ENST00000612438 RPS29P62273 56 aaKnown RBP4.67□□□□□ -1.66
LINC00547-201ENST00000612438 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
LINC00547-201ENST00000612438 RYR2Q92736 4967 aa4.63□□□□□ -1.67
LINC00547-201ENST00000612438 RYR3Q15413 4870 aa4.63□□□□□ -1.67
LINC00547-201ENST00000612438 DMBT1Q9UGM3 2413 aaPredicted RBP4.62□□□□□ -1.67
LINC00547-201ENST00000612438 C9orf92A6NGG3 77 aa4.61□□□□□ -1.67
LINC00547-201ENST00000612438 A0A0D9SG42 100 aa4.59□□□□□ -1.67
LINC00547-201ENST00000612438 APOBP04114 4563 aaKnown RBP4.57□□□□□ -1.68
LINC00547-201ENST00000612438 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
LINC00547-201ENST00000612438 KIAA1109Q2LD37 5005 aa4.55□□□□□ -1.68
LINC00547-201ENST00000612438 LRP1Q07954 4544 aaKnown RBP4.54□□□□□ -1.68
LINC00547-201ENST00000612438 PKHD1L1Q86WI1 4243 aa4.53□□□□□ -1.68
LINC00547-201ENST00000612438 S4R3F8 94 aa4.52□□□□□ -1.69
LINC00547-201ENST00000612438 PLAC4Q8WY50 150 aa4.51□□□□□ -1.69
LINC00547-201ENST00000612438 EPPK1P58107 5090 aaKnown RBP4.5□□□□□ -1.69
LINC00547-201ENST00000612438 MYCBP2O75592 4640 aa4.5□□□□□ -1.69
LINC00547-201ENST00000612438 J3QL48 77 aa4.49□□□□□ -1.69
LINC00547-201ENST00000612438 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
LINC00547-201ENST00000612438 XP32Q5T750 250 aa4.49□□□□□ -1.69
LINC00547-201ENST00000612438 KRTAP10-4P60372 401 aaPredicted RBP4.49□□□□□ -1.69
LINC00547-201ENST00000612438 A0A1B0GVY2 172 aa4.48□□□□□ -1.69
LINC00547-201ENST00000612438 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.7
LINC00547-201ENST00000612438 KRTAP3-2Q9BYR7 98 aa4.45□□□□□ -1.7
LINC00547-201ENST00000612438 KRTAP3-3Q9BYR6 98 aa4.44□□□□□ -1.7
LINC00547-201ENST00000612438 HSPG2P98160 4391 aa4.43□□□□□ -1.7
LINC00547-201ENST00000612438 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
LINC00547-201ENST00000612438 RYR1P21817 5038 aa4.43□□□□□ -1.7
LINC00547-201ENST00000612438 FAT3Q8TDW7 4589 aa4.42□□□□□ -1.7
LINC00547-201ENST00000612438 KRTAP17-1Q9BYP8 105 aa4.42□□□□□ -1.7
LINC00547-201ENST00000612438 Q5VSD8 79 aa4.4□□□□□ -1.71
LINC00547-201ENST00000612438 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
LINC00547-201ENST00000612438 KRTAP10-8P60410 259 aa4.35□□□□□ -1.71
LINC00547-201ENST00000612438 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
LINC00547-201ENST00000612438 TNXBP22105 4242 aa4.31□□□□□ -1.72
LINC00547-201ENST00000612438 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
LINC00547-201ENST00000612438 ABCA13Q86UQ4 5058 aa4.27□□□□□ -1.73
LINC00547-201ENST00000612438 LPAP08519 4548 aa4.25□□□□□ -1.73
LINC00547-201ENST00000612438 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
LINC00547-201ENST00000612438 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
LINC00547-201ENST00000612438 LRP2P98164 4655 aa4.23□□□□□ -1.73
LINC00547-201ENST00000612438 HERC2O95714 4834 aa4.23□□□□□ -1.73
LINC00547-201ENST00000612438 M0QZ58 72 aa4.2□□□□□ -1.74
LINC00547-201ENST00000612438 R4GN34 69 aa4.18□□□□□ -1.74
LINC00547-201ENST00000612438 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
LINC00547-201ENST00000612438 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
LINC00547-201ENST00000612438 INE1O15225 51 aa4.13□□□□□ -1.75
LINC00547-201ENST00000612438 HERC1Q15751 4861 aa4.13□□□□□ -1.75
LINC00547-201ENST00000612438 MUC2Q02817 5179 aa4.11□□□□□ -1.75
LINC00547-201ENST00000612438 BIRC6Q9NR09 4857 aa4.09□□□□□ -1.75
LINC00547-201ENST00000612438 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
LINC00547-201ENST00000612438 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
LINC00547-201ENST00000612438 LORP23490 312 aaPredicted RBP3.99□□□□□ -1.77
LINC00547-201ENST00000612438 RNF213Q63HN8 5207 aa3.98□□□□□ -1.77
LINC00547-201ENST00000612438 UBR4Q5T4S7 5183 aa3.93□□□□□ -1.78
LINC00547-201ENST00000612438 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
LINC00547-201ENST00000612438 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
LINC00547-201ENST00000612438 KRTAP4-1Q9BYQ7 146 aa3.91□□□□□ -1.78
LINC00547-201ENST00000612438 HMCN2Q8NDA2 5059 aa3.88□□□□□ -1.79
LINC00547-201ENST00000612438 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
LINC00547-201ENST00000612438 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
LINC00547-201ENST00000612438 TNP1P09430 55 aa3.78□□□□□ -1.8
LINC00547-201ENST00000612438 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
LINC00547-201ENST00000612438 M0R2T5 61 aa3.69□□□□□ -1.82
LINC00547-201ENST00000612438 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
LINC00547-201ENST00000612438 LCE2CQ5TA81 110 aa3.57□□□□□ -1.84
LINC00547-201ENST00000612438 KRTAP19-1Q8IUB9 90 aa3.57□□□□□ -1.84
LINC00547-201ENST00000612438 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
LINC00547-201ENST00000612438 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
LINC00547-201ENST00000612438 MT1HP80294 61 aa3.52□□□□□ -1.85
LINC00547-201ENST00000612438 USH2AO75445 5202 aa3.5□□□□□ -1.85
LINC00547-201ENST00000612438 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
LINC00547-201ENST00000612438 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
LINC00547-201ENST00000612438 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
LINC00547-201ENST00000612438 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
LINC00547-201ENST00000612438 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
LINC00547-201ENST00000612438 MT1FP04733 61 aa3.44□□□□□ -1.86
LINC00547-201ENST00000612438 MT2AP02795 61 aa3.44□□□□□ -1.86
LINC00547-201ENST00000612438 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
LINC00547-201ENST00000612438 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
LINC00547-201ENST00000612438 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
LINC00547-201ENST00000612438 MT1XP80297 61 aa3.37□□□□□ -1.87
LINC00547-201ENST00000612438 KRTAP4-8A0A0G2JLE6 195 aa3.37□□□□□ -1.87
LINC00547-201ENST00000612438 MT1BP07438 61 aa3.36□□□□□ -1.87
LINC00547-201ENST00000612438 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
LINC00547-201ENST00000612438 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
LINC00547-201ENST00000612438 KMT2DO14686 5537 aa3.31□□□□□ -1.88
LINC00547-201ENST00000612438 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
LINC00547-201ENST00000612438 LCE2DQ5TA82 110 aaPredicted RBP3.26□□□□□ -1.89
LINC00547-201ENST00000612438 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
LINC00547-201ENST00000612438 LCE2BO14633 110 aa3.21□□□□□ -1.9
LINC00547-201ENST00000612438 LCE2AQ5TA79 106 aaPredicted RBP3.2□□□□□ -1.9
LINC00547-201ENST00000612438 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
LINC00547-201ENST00000612438 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
LINC00547-201ENST00000612438 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
LINC00547-201ENST00000612438 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
LINC00547-201ENST00000612438 KRTAP2-3P0C7H8 128 aa3.15□□□□□ -1.9
LINC00547-201ENST00000612438 KRTAP2-4Q9BYR9 128 aa3.15□□□□□ -1.9
LINC00547-201ENST00000612438 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.9
LINC00547-201ENST00000612438 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms