RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SPRR2GQ9BYE4 73 aa8□□□□□ -1.13
SSBP1-215ENST00000612337 C1orf64Q8NEQ6 169 aa7.99□□□□□ -1.13
SSBP1-215ENST00000612337 LCA10Q71F78 164 aa7.98□□□□□ -1.13
SSBP1-215ENST00000612337 LCE4AQ5TA78 99 aa7.94□□□□□ -1.14
SSBP1-215ENST00000612337 ACYP1P07311 99 aa7.93□□□□□ -1.14
SSBP1-215ENST00000612337 KRTAP10-5P60370 271 aa7.91□□□□□ -1.14
SSBP1-215ENST00000612337 KLKP1Q107X0 134 aa7.9□□□□□ -1.14
SSBP1-215ENST00000612337 FAM240AA0A1B0GVK7 77 aa7.88□□□□□ -1.15
SSBP1-215ENST00000612337 CYP4F30PQ9H0H9 118 aa7.88□□□□□ -1.15
SSBP1-215ENST00000612337 KRTAP19-4Q3LI73 84 aa7.87□□□□□ -1.15
SSBP1-215ENST00000612337 ATP5EP2Q5VTU8 51 aa7.85□□□□□ -1.15
SSBP1-215ENST00000612337 KRTAP4-8A0A0G2JLE6 195 aa7.84□□□□□ -1.15
SSBP1-215ENST00000612337 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
SSBP1-215ENST00000612337 MDN1Q9NU22 5596 aa7.82□□□□□ -1.16
SSBP1-215ENST00000612337 KMT2DO14686 5537 aa7.81□□□□□ -1.16
SSBP1-215ENST00000612337 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
SSBP1-215ENST00000612337 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
SSBP1-215ENST00000612337 KRTAP5-9P26371 169 aa7.79□□□□□ -1.16
SSBP1-215ENST00000612337 CRIPTQ9P021 101 aa7.79□□□□□ -1.16
SSBP1-215ENST00000612337 UQCRQO14949 82 aa7.77□□□□□ -1.17
SSBP1-215ENST00000612337 KRTAP20-1Q3LI63 56 aa7.76□□□□□ -1.17
SSBP1-215ENST00000612337 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
SSBP1-215ENST00000612337 A0A087WVE0 104 aa7.73□□□□□ -1.17
SSBP1-215ENST00000612337 IMUPQ9GZP8 106 aa7.73□□□□□ -1.17
SSBP1-215ENST00000612337 H0Y9P7 68 aa7.72□□□□□ -1.17
SSBP1-215ENST00000612337 ATOX1O00244 68 aa7.72□□□□□ -1.17
SSBP1-215ENST00000612337 LCE1DQ5T752 114 aa7.7□□□□□ -1.18
SSBP1-215ENST00000612337 A0A1B0GV90 55 aa7.67□□□□□ -1.18
SSBP1-215ENST00000612337 H0YAA0 97 aa7.63□□□□□ -1.19
SSBP1-215ENST00000612337 NDUFC1O43677 76 aa7.61□□□□□ -1.19
SSBP1-215ENST00000612337 LINC00208Q96KT6 92 aa7.6□□□□□ -1.19
SSBP1-215ENST00000612337 OCR1Q9BZK8 76 aa7.6□□□□□ -1.19
SSBP1-215ENST00000612337 A8MUN3 132 aa7.58□□□□□ -1.2
SSBP1-215ENST00000612337 MP68P56378 58 aa7.56□□□□□ -1.2
SSBP1-215ENST00000612337 KRTAP4-7Q9BYR0 210 aa7.54□□□□□ -1.2
SSBP1-215ENST00000612337 J3QR89 54 aa7.52□□□□□ -1.21
SSBP1-215ENST00000612337 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
SSBP1-215ENST00000612337 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
SSBP1-215ENST00000612337 KRTAP2-3P0C7H8 128 aa7.5□□□□□ -1.21
SSBP1-215ENST00000612337 KRTAP2-4Q9BYR9 128 aa7.5□□□□□ -1.21
SSBP1-215ENST00000612337 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
SSBP1-215ENST00000612337 MT1XP80297 61 aa7.48□□□□□ -1.21
SSBP1-215ENST00000612337 H3BPC8 53 aa7.46□□□□□ -1.22
SSBP1-215ENST00000612337 KRTAP4-9Q9BYQ8 210 aa7.45□□□□□ -1.22
SSBP1-215ENST00000612337 SPRR2EP22531 72 aa7.43□□□□□ -1.22
SSBP1-215ENST00000612337 SPRR2BP35325 72 aa7.43□□□□□ -1.22
SSBP1-215ENST00000612337 SPRR2AP35326 72 aa7.43□□□□□ -1.22
SSBP1-215ENST00000612337 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
SSBP1-215ENST00000612337 SCGB1A1P11684 91 aa7.42□□□□□ -1.22
SSBP1-215ENST00000612337 KRTAP8-1Q8IUC2 63 aa7.38□□□□□ -1.23
SSBP1-215ENST00000612337 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
SSBP1-215ENST00000612337 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
SSBP1-215ENST00000612337 R4GN34 69 aa7.36□□□□□ -1.23
SSBP1-215ENST00000612337 LCE5AQ5TCM9 118 aa7.33□□□□□ -1.24
SSBP1-215ENST00000612337 P0C880 135 aa7.32□□□□□ -1.24
SSBP1-215ENST00000612337 C20orf197Q8N268 126 aa7.32□□□□□ -1.24
SSBP1-215ENST00000612337 LCE1AQ5T7P2 110 aa7.31□□□□□ -1.24
SSBP1-215ENST00000612337 M0QZ58 72 aa7.28□□□□□ -1.24
SSBP1-215ENST00000612337 MT-ATP8P03928 68 aa7.26□□□□□ -1.25
SSBP1-215ENST00000612337 KRTAP4-11Q9BYQ6 195 aa7.24□□□□□ -1.25
SSBP1-215ENST00000612337 KRTAP2-2Q9BYT5 123 aa7.24□□□□□ -1.25
SSBP1-215ENST00000612337 KRTAP2-1Q9BYU5 128 aa7.24□□□□□ -1.25
SSBP1-215ENST00000612337 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
SSBP1-215ENST00000612337 K7ERU9 68 aa7.23□□□□□ -1.25
SSBP1-215ENST00000612337 KRTAP4-2Q9BYR5 136 aa7.23□□□□□ -1.25
SSBP1-215ENST00000612337 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
SSBP1-215ENST00000612337 ACYP2P14621 99 aa7.19□□□□□ -1.26
SSBP1-215ENST00000612337 SPRR2DP22532 72 aa7.19□□□□□ -1.26
SSBP1-215ENST00000612337 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
SSBP1-215ENST00000612337 KRTAP10-7P60409 375 aaPredicted RBP7.13□□□□□ -1.27
SSBP1-215ENST00000612337 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
SSBP1-215ENST00000612337 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
SSBP1-215ENST00000612337 SPTSSBQ8NFR3 76 aa7.1□□□□□ -1.27
SSBP1-215ENST00000612337 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
SSBP1-215ENST00000612337 CHKB-CPT1BH3BT56 60 aa7.03□□□□□ -1.28
SSBP1-215ENST00000612337 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
SSBP1-215ENST00000612337 SERP2Q8N6R1 65 aa6.97□□□□□ -1.29
SSBP1-215ENST00000612337 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
SSBP1-215ENST00000612337 COA5Q86WW8 74 aa6.78□□□□□ -1.32
SSBP1-215ENST00000612337 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
SSBP1-215ENST00000612337 COX7CP15954 63 aa6.74□□□□□ -1.33
SSBP1-215ENST00000612337 GPR98Q8WXG9 6306 aa6.73□□□□□ -1.33
SSBP1-215ENST00000612337 DSTQ03001 7570 aaKnown RBP6.73□□□□□ -1.33
SSBP1-215ENST00000612337 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
SSBP1-215ENST00000612337 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
SSBP1-215ENST00000612337 SEC61GP60059 68 aa6.67□□□□□ -1.34
SSBP1-215ENST00000612337 SERP1Q9Y6X1 66 aa6.66□□□□□ -1.34
SSBP1-215ENST00000612337 H7BZZ5 65 aa6.65□□□□□ -1.34
SSBP1-215ENST00000612337 MT1EP04732 61 aa6.64□□□□□ -1.35
SSBP1-215ENST00000612337 KRTAP19-3Q7Z4W3 81 aa6.64□□□□□ -1.35
SSBP1-215ENST00000612337 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
SSBP1-215ENST00000612337 A0A0D9SG42 100 aa6.58□□□□□ -1.36
SSBP1-215ENST00000612337 A0A1B0GU33 70 aa6.57□□□□□ -1.36
SSBP1-215ENST00000612337 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
SSBP1-215ENST00000612337 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
SSBP1-215ENST00000612337 ANAPC13Q9BS18 74 aa6.48□□□□□ -1.37
SSBP1-215ENST00000612337 MT1GP13640 62 aa6.46□□□□□ -1.38
SSBP1-215ENST00000612337 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
SSBP1-215ENST00000612337 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
SSBP1-215ENST00000612337 HMCN1Q96RW7 5635 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms