RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 KRTAP11-1Q8IUC1 163 aa4.86□□□□□ -1.63
ZNF248-208ENST00000611278 UQCR11O14957 56 aa4.86□□□□□ -1.63
ZNF248-208ENST00000611278 CSAG1Q6PB30 78 aa4.84□□□□□ -1.63
ZNF248-208ENST00000611278 C8orf17Q9NRJ1 99 aa4.83□□□□□ -1.64
ZNF248-208ENST00000611278 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
ZNF248-208ENST00000611278 KRTAP7-1Q8IUC3 87 aa4.82□□□□□ -1.64
ZNF248-208ENST00000611278 MMP24-AS1A0A0U1RRL7 71 aa4.82□□□□□ -1.64
ZNF248-208ENST00000611278 MRPL34Q9BQ48 92 aaKnown RBP4.81□□□□□ -1.64
ZNF248-208ENST00000611278 KRTAP4-16G5E9R7 235 aaPredicted RBP4.81□□□□□ -1.64
ZNF248-208ENST00000611278 LINC00472Q9H8W2 130 aa4.79□□□□□ -1.64
ZNF248-208ENST00000611278 KRTAP13-3Q3SY46 172 aa4.78□□□□□ -1.64
ZNF248-208ENST00000611278 A0A1B0GVX0 72 aa4.77□□□□□ -1.65
ZNF248-208ENST00000611278 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
ZNF248-208ENST00000611278 XP32Q5T750 250 aa4.75□□□□□ -1.65
ZNF248-208ENST00000611278 K7ERS5 55 aa4.74□□□□□ -1.65
ZNF248-208ENST00000611278 LCE2AQ5TA79 106 aaPredicted RBP4.73□□□□□ -1.65
ZNF248-208ENST00000611278 SPATA8Q6RVD6 105 aa4.71□□□□□ -1.65
ZNF248-208ENST00000611278 IGKV2D-30A0A075B6S6 120 aa4.71□□□□□ -1.66
ZNF248-208ENST00000611278 IGKV2-30P06310 120 aa4.71□□□□□ -1.66
ZNF248-208ENST00000611278 FAT4Q6V0I7 4981 aa4.67□□□□□ -1.66
ZNF248-208ENST00000611278 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
ZNF248-208ENST00000611278 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
ZNF248-208ENST00000611278 LPAP08519 4548 aa4.64□□□□□ -1.67
ZNF248-208ENST00000611278 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
ZNF248-208ENST00000611278 Q5W150 140 aa4.62□□□□□ -1.67
ZNF248-208ENST00000611278 NOTCH2NLQ7Z3S9 236 aa4.61□□□□□ -1.67
ZNF248-208ENST00000611278 ROMO1P60602 79 aa4.61□□□□□ -1.67
ZNF248-208ENST00000611278 CRIPTQ9P021 101 aa4.61□□□□□ -1.67
ZNF248-208ENST00000611278 MUC17Q685J3 4493 aa4.59□□□□□ -1.67
ZNF248-208ENST00000611278 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.68
ZNF248-208ENST00000611278 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.68
ZNF248-208ENST00000611278 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
ZNF248-208ENST00000611278 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
ZNF248-208ENST00000611278 A0A1B0GU33 70 aa4.52□□□□□ -1.69
ZNF248-208ENST00000611278 A8MUU9 505 aa4.52□□□□□ -1.69
ZNF248-208ENST00000611278 KRTAP10-10P60014 251 aa4.49□□□□□ -1.69
ZNF248-208ENST00000611278 MUC2Q02817 5179 aa4.48□□□□□ -1.69
ZNF248-208ENST00000611278 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
ZNF248-208ENST00000611278 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
ZNF248-208ENST00000611278 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
ZNF248-208ENST00000611278 A0A0D9SG42 100 aa4.41□□□□□ -1.7
ZNF248-208ENST00000611278 H0YAA0 97 aa4.38□□□□□ -1.71
ZNF248-208ENST00000611278 KRTAP4-1Q9BYQ7 146 aa4.38□□□□□ -1.71
ZNF248-208ENST00000611278 S4R3F8 94 aa4.37□□□□□ -1.71
ZNF248-208ENST00000611278 P0C880 135 aa4.35□□□□□ -1.71
ZNF248-208ENST00000611278 MT1HP80294 61 aa4.35□□□□□ -1.71
ZNF248-208ENST00000611278 LCE2CQ5TA81 110 aa4.35□□□□□ -1.71
ZNF248-208ENST00000611278 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
ZNF248-208ENST00000611278 LORP23490 312 aaPredicted RBP4.32□□□□□ -1.72
ZNF248-208ENST00000611278 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
ZNF248-208ENST00000611278 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
ZNF248-208ENST00000611278 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
ZNF248-208ENST00000611278 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
ZNF248-208ENST00000611278 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
ZNF248-208ENST00000611278 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
ZNF248-208ENST00000611278 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
ZNF248-208ENST00000611278 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
ZNF248-208ENST00000611278 R4GN34 69 aa4.17□□□□□ -1.74
ZNF248-208ENST00000611278 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
ZNF248-208ENST00000611278 FLGP20930 4061 aaPredicted RBP4.1□□□□□ -1.75
ZNF248-208ENST00000611278 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
ZNF248-208ENST00000611278 KRTAP9-8Q9BYQ0 159 aa4.06□□□□□ -1.76
ZNF248-208ENST00000611278 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
ZNF248-208ENST00000611278 M0QZ58 72 aa4.05□□□□□ -1.76
ZNF248-208ENST00000611278 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
ZNF248-208ENST00000611278 MT2AP02795 61 aa4.03□□□□□ -1.76
ZNF248-208ENST00000611278 USH2AO75445 5202 aa4□□□□□ -1.77
ZNF248-208ENST00000611278 SSPOA2VEC9 5147 aa4□□□□□ -1.77
ZNF248-208ENST00000611278 KRTAP13-4Q3LI77 160 aa3.99□□□□□ -1.77
ZNF248-208ENST00000611278 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
ZNF248-208ENST00000611278 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
ZNF248-208ENST00000611278 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
ZNF248-208ENST00000611278 KRTAP9-3Q9BYQ3 159 aa3.95□□□□□ -1.78
ZNF248-208ENST00000611278 LCE2BO14633 110 aa3.95□□□□□ -1.78
ZNF248-208ENST00000611278 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
ZNF248-208ENST00000611278 MT1FP04733 61 aa3.94□□□□□ -1.78
ZNF248-208ENST00000611278 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
ZNF248-208ENST00000611278 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
ZNF248-208ENST00000611278 KRTAP3-2Q9BYR7 98 aa3.86□□□□□ -1.79
ZNF248-208ENST00000611278 KRTAP3-3Q9BYR6 98 aa3.85□□□□□ -1.79
ZNF248-208ENST00000611278 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
ZNF248-208ENST00000611278 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
ZNF248-208ENST00000611278 NEBP20929 6669 aa3.79□□□□□ -1.8
ZNF248-208ENST00000611278 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
ZNF248-208ENST00000611278 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
ZNF248-208ENST00000611278 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
ZNF248-208ENST00000611278 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
ZNF248-208ENST00000611278 KRTAP19-8Q3LI54 63 aa3.68□□□□□ -1.82
ZNF248-208ENST00000611278 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
ZNF248-208ENST00000611278 SPRR2EP22531 72 aa3.65□□□□□ -1.82
ZNF248-208ENST00000611278 SPRR2BP35325 72 aa3.65□□□□□ -1.82
ZNF248-208ENST00000611278 SPRR2AP35326 72 aa3.65□□□□□ -1.82
ZNF248-208ENST00000611278 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
ZNF248-208ENST00000611278 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
ZNF248-208ENST00000611278 TNP1P09430 55 aa3.64□□□□□ -1.83
ZNF248-208ENST00000611278 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
ZNF248-208ENST00000611278 SPRR2DP22532 72 aa3.56□□□□□ -1.84
ZNF248-208ENST00000611278 MT1BP07438 61 aa3.55□□□□□ -1.84
ZNF248-208ENST00000611278 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
ZNF248-208ENST00000611278 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms