RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 HECTD4Q9Y4D8 3996 aa8.85□□□□□ -0.99
CDK11B-205ENST00000611150 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
CDK11B-205ENST00000611150 FAT2Q9NYQ8 4349 aa8.82□□□□□ -1
CDK11B-205ENST00000611150 DNAH8Q96JB1 4490 aa8.81□□□□□ -1
CDK11B-205ENST00000611150 A0A1B0GVY2 172 aa8.78□□□□□ -1
CDK11B-205ENST00000611150 PKD1P98161 4303 aa8.75□□□□□ -1.01
CDK11B-205ENST00000611150 PKHD1P08F94 4074 aa8.73□□□□□ -1.01
CDK11B-205ENST00000611150 KRTAP13-2Q52LG2 175 aa8.72□□□□□ -1.01
CDK11B-205ENST00000611150 KRTAP12-1P59990 96 aa8.71□□□□□ -1.01
CDK11B-205ENST00000611150 PRO2289Q9P1D8 64 aa8.7□□□□□ -1.02
CDK11B-205ENST00000611150 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
CDK11B-205ENST00000611150 DYNC1H1Q14204 4646 aaKnown RBP8.67□□□□□ -1.02
CDK11B-205ENST00000611150 HERC2O95714 4834 aa8.67□□□□□ -1.02
CDK11B-205ENST00000611150 Q6ZRN7 208 aaPredicted RBP8.67□□□□□ -1.02
CDK11B-205ENST00000611150 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
CDK11B-205ENST00000611150 LRP1BQ9NZR2 4599 aa8.57□□□□□ -1.04
CDK11B-205ENST00000611150 KRTAP10-2P60368 255 aa8.56□□□□□ -1.04
CDK11B-205ENST00000611150 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
CDK11B-205ENST00000611150 RYR1P21817 5038 aa8.54□□□□□ -1.04
CDK11B-205ENST00000611150 DNAH5Q8TE73 4624 aa8.53□□□□□ -1.04
CDK11B-205ENST00000611150 HSPG2P98160 4391 aa8.51□□□□□ -1.05
CDK11B-205ENST00000611150 KRTAP17-1Q9BYP8 105 aa8.49□□□□□ -1.05
CDK11B-205ENST00000611150 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
CDK11B-205ENST00000611150 PCLOQ9Y6V0 5065 aa8.46□□□□□ -1.05
CDK11B-205ENST00000611150 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
CDK11B-205ENST00000611150 KRTAP10-1P60331 282 aa8.42□□□□□ -1.06
CDK11B-205ENST00000611150 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
CDK11B-205ENST00000611150 C9orf92A6NGG3 77 aa8.41□□□□□ -1.06
CDK11B-205ENST00000611150 ABCA13Q86UQ4 5058 aa8.4□□□□□ -1.06
CDK11B-205ENST00000611150 R4GN34 69 aa8.39□□□□□ -1.07
CDK11B-205ENST00000611150 M0QZ58 72 aa8.38□□□□□ -1.07
CDK11B-205ENST00000611150 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
CDK11B-205ENST00000611150 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
CDK11B-205ENST00000611150 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
CDK11B-205ENST00000611150 FAT1Q14517 4588 aa8.31□□□□□ -1.08
CDK11B-205ENST00000611150 SMR3BP02814 79 aaPredicted RBP8.3□□□□□ -1.08
CDK11B-205ENST00000611150 Q5VSD8 79 aa8.29□□□□□ -1.08
CDK11B-205ENST00000611150 INE1O15225 51 aa8.28□□□□□ -1.08
CDK11B-205ENST00000611150 VPS13BQ7Z7G8 4022 aa8.26□□□□□ -1.09
CDK11B-205ENST00000611150 MYCBP2O75592 4640 aa8.15□□□□□ -1.11
CDK11B-205ENST00000611150 SPRR5A0A1B0GTR4 108 aa8.13□□□□□ -1.11
CDK11B-205ENST00000611150 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
CDK11B-205ENST00000611150 HERC1Q15751 4861 aa8.08□□□□□ -1.12
CDK11B-205ENST00000611150 PKHD1L1Q86WI1 4243 aa8□□□□□ -1.13
CDK11B-205ENST00000611150 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
CDK11B-205ENST00000611150 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
CDK11B-205ENST00000611150 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
CDK11B-205ENST00000611150 TNXBP22105 4242 aa7.78□□□□□ -1.16
CDK11B-205ENST00000611150 HMCN2Q8NDA2 5059 aa7.77□□□□□ -1.17
CDK11B-205ENST00000611150 KRTAP23-1A1A580 65 aa7.7□□□□□ -1.18
CDK11B-205ENST00000611150 UBR4Q5T4S7 5183 aa7.6□□□□□ -1.19
CDK11B-205ENST00000611150 LRP2P98164 4655 aa7.57□□□□□ -1.2
CDK11B-205ENST00000611150 TNP1P09430 55 aa7.53□□□□□ -1.2
CDK11B-205ENST00000611150 LPAP08519 4548 aa7.44□□□□□ -1.22
CDK11B-205ENST00000611150 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
CDK11B-205ENST00000611150 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
CDK11B-205ENST00000611150 MUC2Q02817 5179 aa7.17□□□□□ -1.26
CDK11B-205ENST00000611150 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
CDK11B-205ENST00000611150 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
CDK11B-205ENST00000611150 FAT4Q6V0I7 4981 aa6.99□□□□□ -1.29
CDK11B-205ENST00000611150 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
CDK11B-205ENST00000611150 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
CDK11B-205ENST00000611150 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
CDK11B-205ENST00000611150 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
CDK11B-205ENST00000611150 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
CDK11B-205ENST00000611150 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
CDK11B-205ENST00000611150 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
CDK11B-205ENST00000611150 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
CDK11B-205ENST00000611150 FLGP20930 4061 aaPredicted RBP6.69□□□□□ -1.34
CDK11B-205ENST00000611150 MT1HP80294 61 aa6.67□□□□□ -1.34
CDK11B-205ENST00000611150 LCE2DQ5TA82 110 aaPredicted RBP6.57□□□□□ -1.36
CDK11B-205ENST00000611150 M0R2T5 61 aa6.56□□□□□ -1.36
CDK11B-205ENST00000611150 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
CDK11B-205ENST00000611150 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
CDK11B-205ENST00000611150 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
CDK11B-205ENST00000611150 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
CDK11B-205ENST00000611150 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
CDK11B-205ENST00000611150 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
CDK11B-205ENST00000611150 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
CDK11B-205ENST00000611150 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
CDK11B-205ENST00000611150 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
CDK11B-205ENST00000611150 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
CDK11B-205ENST00000611150 MT2AP02795 61 aa6.22□□□□□ -1.41
CDK11B-205ENST00000611150 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
CDK11B-205ENST00000611150 MT1FP04733 61 aa6.17□□□□□ -1.42
CDK11B-205ENST00000611150 USH2AO75445 5202 aa6.12□□□□□ -1.43
CDK11B-205ENST00000611150 KRTAP9-3Q9BYQ3 159 aa6.11□□□□□ -1.43
CDK11B-205ENST00000611150 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
CDK11B-205ENST00000611150 LCE2BO14633 110 aa6.08□□□□□ -1.44
CDK11B-205ENST00000611150 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
CDK11B-205ENST00000611150 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
CDK11B-205ENST00000611150 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
CDK11B-205ENST00000611150 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
CDK11B-205ENST00000611150 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
CDK11B-205ENST00000611150 KRTAP2-2Q9BYT5 123 aa5.92□□□□□ -1.46
CDK11B-205ENST00000611150 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
CDK11B-205ENST00000611150 MT1XP80297 61 aa5.87□□□□□ -1.47
CDK11B-205ENST00000611150 KRTAP19-6Q3LI70 58 aa5.87□□□□□ -1.47
CDK11B-205ENST00000611150 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
CDK11B-205ENST00000611150 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms