RNA–Protein interactions for RNA: ENST00000609740.1

CCDC138-208, Transcript of coiled-coil domain containing 138, humanhuman

Gene CCDC138, Length 3,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-208ENST00000609740 KRTAP13-1Q8IUC0 172 aa4.15□□□□□ -1.75
CCDC138-208ENST00000609740 LCE2AQ5TA79 106 aaPredicted RBP4.15□□□□□ -1.75
CCDC138-208ENST00000609740 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
CCDC138-208ENST00000609740 PKD1P98161 4303 aa4.13□□□□□ -1.75
CCDC138-208ENST00000609740 LCE2CQ5TA81 110 aa4.13□□□□□ -1.75
CCDC138-208ENST00000609740 SMR3BP02814 79 aaPredicted RBP4.12□□□□□ -1.75
CCDC138-208ENST00000609740 DNAH11Q96DT5 4516 aa4.12□□□□□ -1.75
CCDC138-208ENST00000609740 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
CCDC138-208ENST00000609740 KRTAP10-1P60331 282 aa4.11□□□□□ -1.75
CCDC138-208ENST00000609740 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
CCDC138-208ENST00000609740 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
CCDC138-208ENST00000609740 A0A0D9SG42 100 aa4.04□□□□□ -1.76
CCDC138-208ENST00000609740 DNAH5Q8TE73 4624 aa4.04□□□□□ -1.76
CCDC138-208ENST00000609740 DYNC1H1Q14204 4646 aaKnown RBP4.03□□□□□ -1.76
CCDC138-208ENST00000609740 DNAH8Q96JB1 4490 aa4.02□□□□□ -1.77
CCDC138-208ENST00000609740 EPPK1P58107 5090 aaKnown RBP4.02□□□□□ -1.77
CCDC138-208ENST00000609740 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
CCDC138-208ENST00000609740 KRTAP13-2Q52LG2 175 aa4.02□□□□□ -1.77
CCDC138-208ENST00000609740 PKHD1P08F94 4074 aa4.01□□□□□ -1.77
CCDC138-208ENST00000609740 S4R3F8 94 aa4.01□□□□□ -1.77
CCDC138-208ENST00000609740 C9orf92A6NGG3 77 aa3.99□□□□□ -1.77
CCDC138-208ENST00000609740 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
CCDC138-208ENST00000609740 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
CCDC138-208ENST00000609740 APOBP04114 4563 aaKnown RBP3.95□□□□□ -1.78
CCDC138-208ENST00000609740 LRP1BQ9NZR2 4599 aa3.95□□□□□ -1.78
CCDC138-208ENST00000609740 KRTAP1-4P0C5Y4 121 aa3.94□□□□□ -1.78
CCDC138-208ENST00000609740 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
CCDC138-208ENST00000609740 VPS13BQ7Z7G8 4022 aa3.92□□□□□ -1.78
CCDC138-208ENST00000609740 A0A1B0GVY2 172 aa3.9□□□□□ -1.78
CCDC138-208ENST00000609740 HSPG2P98160 4391 aa3.9□□□□□ -1.79
CCDC138-208ENST00000609740 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
CCDC138-208ENST00000609740 RYR1P21817 5038 aa3.88□□□□□ -1.79
CCDC138-208ENST00000609740 FAT1Q14517 4588 aa3.87□□□□□ -1.79
CCDC138-208ENST00000609740 HERC2O95714 4834 aa3.86□□□□□ -1.79
CCDC138-208ENST00000609740 LCE2BO14633 110 aa3.86□□□□□ -1.79
CCDC138-208ENST00000609740 KIAA1109Q2LD37 5005 aa3.81□□□□□ -1.8
CCDC138-208ENST00000609740 Q5VSD8 79 aa3.81□□□□□ -1.8
CCDC138-208ENST00000609740 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
CCDC138-208ENST00000609740 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
CCDC138-208ENST00000609740 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
CCDC138-208ENST00000609740 KRTAP10-6P60371 365 aaPredicted RBP3.78□□□□□ -1.8
CCDC138-208ENST00000609740 ABCA13Q86UQ4 5058 aa3.77□□□□□ -1.81
CCDC138-208ENST00000609740 FAT3Q8TDW7 4589 aa3.77□□□□□ -1.81
CCDC138-208ENST00000609740 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
CCDC138-208ENST00000609740 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
CCDC138-208ENST00000609740 RPS29P62273 56 aaKnown RBP3.74□□□□□ -1.81
CCDC138-208ENST00000609740 LRP1Q07954 4544 aaKnown RBP3.72□□□□□ -1.81
CCDC138-208ENST00000609740 MYCBP2O75592 4640 aa3.71□□□□□ -1.82
CCDC138-208ENST00000609740 KRTAP10-4P60372 401 aaPredicted RBP3.7□□□□□ -1.82
CCDC138-208ENST00000609740 TNXBP22105 4242 aa3.7□□□□□ -1.82
CCDC138-208ENST00000609740 KRTAP4-5Q9BYR2 181 aa3.66□□□□□ -1.82
CCDC138-208ENST00000609740 HERC1Q15751 4861 aa3.53□□□□□ -1.84
CCDC138-208ENST00000609740 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
CCDC138-208ENST00000609740 LRP2P98164 4655 aa3.52□□□□□ -1.85
CCDC138-208ENST00000609740 M0QZ58 72 aa3.5□□□□□ -1.85
CCDC138-208ENST00000609740 HMCN2Q8NDA2 5059 aa3.5□□□□□ -1.85
CCDC138-208ENST00000609740 LPAP08519 4548 aa3.47□□□□□ -1.85
CCDC138-208ENST00000609740 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.85
CCDC138-208ENST00000609740 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
CCDC138-208ENST00000609740 KRTAP10-10P60014 251 aa3.37□□□□□ -1.87
CCDC138-208ENST00000609740 MUC2Q02817 5179 aa3.36□□□□□ -1.87
CCDC138-208ENST00000609740 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
CCDC138-208ENST00000609740 UBR4Q5T4S7 5183 aa3.31□□□□□ -1.88
CCDC138-208ENST00000609740 M0R2T5 61 aa3.3□□□□□ -1.88
CCDC138-208ENST00000609740 KRTAP4-1Q9BYQ7 146 aa3.29□□□□□ -1.88
CCDC138-208ENST00000609740 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
CCDC138-208ENST00000609740 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
CCDC138-208ENST00000609740 FAT4Q6V0I7 4981 aa3.18□□□□□ -1.9
CCDC138-208ENST00000609740 TNP1P09430 55 aa3.18□□□□□ -1.9
CCDC138-208ENST00000609740 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CCDC138-208ENST00000609740 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.91
CCDC138-208ENST00000609740 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
CCDC138-208ENST00000609740 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
CCDC138-208ENST00000609740 KRTAP19-2Q3LHN2 52 aa3.11□□□□□ -1.91
CCDC138-208ENST00000609740 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
CCDC138-208ENST00000609740 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
CCDC138-208ENST00000609740 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
CCDC138-208ENST00000609740 MT1HP80294 61 aa2.98□□□□□ -1.93
CCDC138-208ENST00000609740 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
CCDC138-208ENST00000609740 KRTAP9-6A0A140TA67 174 aa2.97□□□□□ -1.93
CCDC138-208ENST00000609740 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
CCDC138-208ENST00000609740 MT1FP04733 61 aa2.93□□□□□ -1.94
CCDC138-208ENST00000609740 MT2AP02795 61 aa2.92□□□□□ -1.94
CCDC138-208ENST00000609740 KRTAP19-1Q8IUB9 90 aa2.91□□□□□ -1.94
CCDC138-208ENST00000609740 SPRR2GQ9BYE4 73 aa2.9□□□□□ -1.95
CCDC138-208ENST00000609740 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
CCDC138-208ENST00000609740 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
CCDC138-208ENST00000609740 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
CCDC138-208ENST00000609740 LOC100996750A0A140TA64 210 aa2.83□□□□□ -1.96
CCDC138-208ENST00000609740 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
CCDC138-208ENST00000609740 USH2AO75445 5202 aa2.83□□□□□ -1.96
CCDC138-208ENST00000609740 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
CCDC138-208ENST00000609740 FSIP2Q5CZC0 6907 aa2.82□□□□□ -1.96
CCDC138-208ENST00000609740 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
CCDC138-208ENST00000609740 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
CCDC138-208ENST00000609740 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
CCDC138-208ENST00000609740 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
CCDC138-208ENST00000609740 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
CCDC138-208ENST00000609740 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
CCDC138-208ENST00000609740 KRTAP9-2Q9BYQ4 174 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms