RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
HDDC2-209ENST00000609477 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
HDDC2-209ENST00000609477 FAM236AA0A1B0GUQ0 79 aa6.59□□□□□ -1.35
HDDC2-209ENST00000609477 FAM236BA0A1B0GV22 79 aa6.59□□□□□ -1.35
HDDC2-209ENST00000609477 MT-ATP8P03928 68 aa6.59□□□□□ -1.35
HDDC2-209ENST00000609477 NDUFC1O43677 76 aa6.57□□□□□ -1.36
HDDC2-209ENST00000609477 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
HDDC2-209ENST00000609477 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
HDDC2-209ENST00000609477 H0YAA0 97 aa6.51□□□□□ -1.37
HDDC2-209ENST00000609477 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
HDDC2-209ENST00000609477 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
HDDC2-209ENST00000609477 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
HDDC2-209ENST00000609477 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
HDDC2-209ENST00000609477 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
HDDC2-209ENST00000609477 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
HDDC2-209ENST00000609477 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.38
HDDC2-209ENST00000609477 ACYP2P14621 99 aa6.38□□□□□ -1.39
HDDC2-209ENST00000609477 Q5VV11 94 aa6.38□□□□□ -1.39
HDDC2-209ENST00000609477 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
HDDC2-209ENST00000609477 SERP2Q8N6R1 65 aa6.36□□□□□ -1.39
HDDC2-209ENST00000609477 ADM2Q7Z4H4 148 aa6.35□□□□□ -1.39
HDDC2-209ENST00000609477 MT1BP07438 61 aa6.33□□□□□ -1.4
HDDC2-209ENST00000609477 C20orf197Q8N268 126 aa6.33□□□□□ -1.4
HDDC2-209ENST00000609477 SPANXA2-OT1Q8N9U9 137 aa6.31□□□□□ -1.4
HDDC2-209ENST00000609477 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
HDDC2-209ENST00000609477 SNURFQ9Y675 71 aa6.31□□□□□ -1.4
HDDC2-209ENST00000609477 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
HDDC2-209ENST00000609477 A6NN06 94 aa6.23□□□□□ -1.41
HDDC2-209ENST00000609477 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
HDDC2-209ENST00000609477 R4GN34 69 aa6.22□□□□□ -1.41
HDDC2-209ENST00000609477 P0C880 135 aa6.21□□□□□ -1.42
HDDC2-209ENST00000609477 COX7CP15954 63 aa6.2□□□□□ -1.42
HDDC2-209ENST00000609477 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
HDDC2-209ENST00000609477 MACF1Q9UPN3 7388 aaKnown RBP6.2□□□□□ -1.42
HDDC2-209ENST00000609477 KRTAP10-5P60370 271 aa6.19□□□□□ -1.42
HDDC2-209ENST00000609477 M0QZ58 72 aa6.15□□□□□ -1.42
HDDC2-209ENST00000609477 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
HDDC2-209ENST00000609477 SYNE2Q8WXH0 6885 aaKnown RBP6.09□□□□□ -1.43
HDDC2-209ENST00000609477 PRO2289Q9P1D8 64 aa6.08□□□□□ -1.44
HDDC2-209ENST00000609477 H7BZZ5 65 aa6.06□□□□□ -1.44
HDDC2-209ENST00000609477 KRTAP6-3Q3LI67 103 aa6.06□□□□□ -1.44
HDDC2-209ENST00000609477 COA5Q86WW8 74 aa6.06□□□□□ -1.44
HDDC2-209ENST00000609477 ANAPC13Q9BS18 74 aa6.05□□□□□ -1.44
HDDC2-209ENST00000609477 LINC01554Q52M75 96 aa6.01□□□□□ -1.45
HDDC2-209ENST00000609477 CYSTM1Q9H1C7 97 aa5.99□□□□□ -1.45
HDDC2-209ENST00000609477 MT1XP80297 61 aa5.98□□□□□ -1.45
HDDC2-209ENST00000609477 SEC61GP60059 68 aa5.96□□□□□ -1.46
HDDC2-209ENST00000609477 SERP1Q9Y6X1 66 aa5.93□□□□□ -1.46
HDDC2-209ENST00000609477 CCDC179H3BU77 68 aa5.88□□□□□ -1.47
HDDC2-209ENST00000609477 ATP5EP56381 51 aaPredicted RBP5.88□□□□□ -1.47
HDDC2-209ENST00000609477 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
HDDC2-209ENST00000609477 KRTAP5-9P26371 169 aa5.86□□□□□ -1.47
HDDC2-209ENST00000609477 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
HDDC2-209ENST00000609477 A0A1B0GU33 70 aa5.81□□□□□ -1.48
HDDC2-209ENST00000609477 A0A1B0GU69 56 aa5.77□□□□□ -1.49
HDDC2-209ENST00000609477 TMEM258P61165 79 aa5.75□□□□□ -1.49
HDDC2-209ENST00000609477 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
HDDC2-209ENST00000609477 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
HDDC2-209ENST00000609477 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
HDDC2-209ENST00000609477 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
HDDC2-209ENST00000609477 MUC12Q9UKN1 5478 aa5.69□□□□□ -1.5
HDDC2-209ENST00000609477 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
HDDC2-209ENST00000609477 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
HDDC2-209ENST00000609477 NEBP20929 6669 aa5.68□□□□□ -1.5
HDDC2-209ENST00000609477 KMT2DO14686 5537 aa5.68□□□□□ -1.5
HDDC2-209ENST00000609477 A0A0D9SG42 100 aa5.68□□□□□ -1.5
HDDC2-209ENST00000609477 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
HDDC2-209ENST00000609477 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
HDDC2-209ENST00000609477 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
HDDC2-209ENST00000609477 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
HDDC2-209ENST00000609477 SPINT4Q6UDR6 99 aa5.63□□□□□ -1.51
HDDC2-209ENST00000609477 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
HDDC2-209ENST00000609477 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
HDDC2-209ENST00000609477 MDN1Q9NU22 5596 aa5.6□□□□□ -1.51
HDDC2-209ENST00000609477 SPRR2EP22531 72 aa5.55□□□□□ -1.52
HDDC2-209ENST00000609477 SPRR2BP35325 72 aa5.55□□□□□ -1.52
HDDC2-209ENST00000609477 SPRR2AP35326 72 aa5.55□□□□□ -1.52
HDDC2-209ENST00000609477 A8MU10 97 aa5.52□□□□□ -1.53
HDDC2-209ENST00000609477 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
HDDC2-209ENST00000609477 UQCR11O14957 56 aa5.5□□□□□ -1.53
HDDC2-209ENST00000609477 KRTAP20-1Q3LI63 56 aa5.5□□□□□ -1.53
HDDC2-209ENST00000609477 PCP4P48539 62 aa5.48□□□□□ -1.53
HDDC2-209ENST00000609477 V9GYY9 64 aa5.46□□□□□ -1.54
HDDC2-209ENST00000609477 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
HDDC2-209ENST00000609477 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
HDDC2-209ENST00000609477 Q1T7F1 81 aa5.39□□□□□ -1.55
HDDC2-209ENST00000609477 SPRR2DP22532 72 aa5.37□□□□□ -1.55
HDDC2-209ENST00000609477 TNP1P09430 55 aa5.36□□□□□ -1.55
HDDC2-209ENST00000609477 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
HDDC2-209ENST00000609477 KRTAP19-7Q3SYF9 63 aa5.35□□□□□ -1.55
HDDC2-209ENST00000609477 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
HDDC2-209ENST00000609477 PSPHP1O15172 72 aa5.29□□□□□ -1.56
HDDC2-209ENST00000609477 MT1EP04732 61 aa5.29□□□□□ -1.56
HDDC2-209ENST00000609477 K7ERS5 55 aa5.28□□□□□ -1.56
HDDC2-209ENST00000609477 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
HDDC2-209ENST00000609477 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
HDDC2-209ENST00000609477 RPS28P62857 69 aaKnown RBP5.27□□□□□ -1.57
HDDC2-209ENST00000609477 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
HDDC2-209ENST00000609477 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
HDDC2-209ENST00000609477 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms