RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
SSBP4-214ENST00000607020 LOC101927531A0A1B0GV80 90 aa6.78□□□□□ -1.32
SSBP4-214ENST00000607020 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
SSBP4-214ENST00000607020 Q5VV11 94 aa6.78□□□□□ -1.32
SSBP4-214ENST00000607020 H0Y9P7 68 aa6.77□□□□□ -1.33
SSBP4-214ENST00000607020 CYP4F30PQ9H0H9 118 aa6.77□□□□□ -1.33
SSBP4-214ENST00000607020 ATOX1O00244 68 aa6.76□□□□□ -1.33
SSBP4-214ENST00000607020 OCR1Q9BZK8 76 aa6.76□□□□□ -1.33
SSBP4-214ENST00000607020 MT-ATP8P03928 68 aa6.74□□□□□ -1.33
SSBP4-214ENST00000607020 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
SSBP4-214ENST00000607020 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
SSBP4-214ENST00000607020 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
SSBP4-214ENST00000607020 C1orf64Q8NEQ6 169 aa6.71□□□□□ -1.34
SSBP4-214ENST00000607020 SCGB1A1P11684 91 aa6.7□□□□□ -1.34
SSBP4-214ENST00000607020 MP68P56378 58 aa6.68□□□□□ -1.34
SSBP4-214ENST00000607020 LINC00208Q96KT6 92 aa6.68□□□□□ -1.34
SSBP4-214ENST00000607020 C5orf47Q569G3 176 aa6.66□□□□□ -1.34
SSBP4-214ENST00000607020 FAM236AA0A1B0GUQ0 79 aa6.65□□□□□ -1.34
SSBP4-214ENST00000607020 FAM236BA0A1B0GV22 79 aa6.65□□□□□ -1.34
SSBP4-214ENST00000607020 H3BPC8 53 aa6.62□□□□□ -1.35
SSBP4-214ENST00000607020 S4R3F8 94 aa6.62□□□□□ -1.35
SSBP4-214ENST00000607020 KLKP1Q107X0 134 aa6.6□□□□□ -1.35
SSBP4-214ENST00000607020 LCA10Q71F78 164 aa6.59□□□□□ -1.35
SSBP4-214ENST00000607020 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
SSBP4-214ENST00000607020 KRTAP2-2Q9BYT5 123 aa6.58□□□□□ -1.36
SSBP4-214ENST00000607020 KRTAP2-1Q9BYU5 128 aa6.58□□□□□ -1.36
SSBP4-214ENST00000607020 TRAV7A0A075B6U4 112 aa6.56□□□□□ -1.36
SSBP4-214ENST00000607020 SPRR2EP22531 72 aa6.55□□□□□ -1.36
SSBP4-214ENST00000607020 SPRR2BP35325 72 aa6.55□□□□□ -1.36
SSBP4-214ENST00000607020 SPRR2AP35326 72 aa6.55□□□□□ -1.36
SSBP4-214ENST00000607020 A8MUN3 132 aa6.54□□□□□ -1.36
SSBP4-214ENST00000607020 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
SSBP4-214ENST00000607020 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
SSBP4-214ENST00000607020 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
SSBP4-214ENST00000607020 LCE1AQ5T7P2 110 aa6.45□□□□□ -1.38
SSBP4-214ENST00000607020 NDUFC1O43677 76 aa6.44□□□□□ -1.38
SSBP4-214ENST00000607020 DMAC1Q96GE9 116 aa6.44□□□□□ -1.38
SSBP4-214ENST00000607020 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
SSBP4-214ENST00000607020 SERP2Q8N6R1 65 aa6.43□□□□□ -1.38
SSBP4-214ENST00000607020 SNURFQ9Y675 71 aa6.4□□□□□ -1.38
SSBP4-214ENST00000607020 C20orf197Q8N268 126 aa6.38□□□□□ -1.39
SSBP4-214ENST00000607020 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
SSBP4-214ENST00000607020 H0YAA0 97 aa6.34□□□□□ -1.39
SSBP4-214ENST00000607020 SPRR2DP22532 72 aa6.34□□□□□ -1.39
SSBP4-214ENST00000607020 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
SSBP4-214ENST00000607020 ACYP2P14621 99 aa6.31□□□□□ -1.4
SSBP4-214ENST00000607020 GPR98Q8WXG9 6306 aa6.29□□□□□ -1.4
SSBP4-214ENST00000607020 COX7CP15954 63 aa6.29□□□□□ -1.4
SSBP4-214ENST00000607020 MT1XP80297 61 aa6.29□□□□□ -1.4
SSBP4-214ENST00000607020 SPANXA2-OT1Q8N9U9 137 aa6.29□□□□□ -1.4
SSBP4-214ENST00000607020 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
SSBP4-214ENST00000607020 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
SSBP4-214ENST00000607020 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
SSBP4-214ENST00000607020 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
SSBP4-214ENST00000607020 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
SSBP4-214ENST00000607020 ANAPC13Q9BS18 74 aa6.2□□□□□ -1.42
SSBP4-214ENST00000607020 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
SSBP4-214ENST00000607020 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
SSBP4-214ENST00000607020 CYSTM1Q9H1C7 97 aa6.16□□□□□ -1.42
SSBP4-214ENST00000607020 H7BZZ5 65 aa6.15□□□□□ -1.42
SSBP4-214ENST00000607020 P0C880 135 aa6.15□□□□□ -1.42
SSBP4-214ENST00000607020 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
SSBP4-214ENST00000607020 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
SSBP4-214ENST00000607020 COA5Q86WW8 74 aa6.1□□□□□ -1.43
SSBP4-214ENST00000607020 R4GN34 69 aa6.08□□□□□ -1.44
SSBP4-214ENST00000607020 CCDC179H3BU77 68 aa6.07□□□□□ -1.44
SSBP4-214ENST00000607020 M0QZ58 72 aa6.05□□□□□ -1.44
SSBP4-214ENST00000607020 DSTQ03001 7570 aaKnown RBP6.03□□□□□ -1.44
SSBP4-214ENST00000607020 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
SSBP4-214ENST00000607020 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
SSBP4-214ENST00000607020 LINC01554Q52M75 96 aa5.94□□□□□ -1.46
SSBP4-214ENST00000607020 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
SSBP4-214ENST00000607020 SEC61GP60059 68 aa5.9□□□□□ -1.46
SSBP4-214ENST00000607020 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.46
SSBP4-214ENST00000607020 SERP1Q9Y6X1 66 aa5.87□□□□□ -1.47
SSBP4-214ENST00000607020 TMEM258P61165 79 aa5.86□□□□□ -1.47
SSBP4-214ENST00000607020 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
SSBP4-214ENST00000607020 A0A1B0GU33 70 aa5.77□□□□□ -1.49
SSBP4-214ENST00000607020 A0A1B0GU69 56 aa5.77□□□□□ -1.49
SSBP4-214ENST00000607020 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
SSBP4-214ENST00000607020 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
SSBP4-214ENST00000607020 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
SSBP4-214ENST00000607020 HMCN1Q96RW7 5635 aa5.69□□□□□ -1.5
SSBP4-214ENST00000607020 A0A0D9SG42 100 aa5.69□□□□□ -1.5
SSBP4-214ENST00000607020 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
SSBP4-214ENST00000607020 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
SSBP4-214ENST00000607020 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
SSBP4-214ENST00000607020 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
SSBP4-214ENST00000607020 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
SSBP4-214ENST00000607020 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
SSBP4-214ENST00000607020 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
SSBP4-214ENST00000607020 SMIM26A0A096LP01 95 aa5.61□□□□□ -1.51
SSBP4-214ENST00000607020 MT1EP04732 61 aa5.61□□□□□ -1.51
SSBP4-214ENST00000607020 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
SSBP4-214ENST00000607020 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
SSBP4-214ENST00000607020 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
SSBP4-214ENST00000607020 A8MU10 97 aa5.57□□□□□ -1.52
SSBP4-214ENST00000607020 PCP4P48539 62 aa5.57□□□□□ -1.52
SSBP4-214ENST00000607020 MT4P47944 62 aa5.56□□□□□ -1.52
SSBP4-214ENST00000607020 UQCR11O14957 56 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms