RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 A8MUU9 505 aa8.3□□□□□ -1.08
CDCA3-211ENST00000603043 CASC2Q6XLA1 102 aa8.3□□□□□ -1.08
CDCA3-211ENST00000603043 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
CDCA3-211ENST00000603043 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
CDCA3-211ENST00000603043 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
CDCA3-211ENST00000603043 MMP24-AS1A0A0U1RRL7 71 aa8.19□□□□□ -1.1
CDCA3-211ENST00000603043 TP53AIP1Q9HCN2 124 aa8.17□□□□□ -1.1
CDCA3-211ENST00000603043 MRPL34Q9BQ48 92 aaKnown RBP8.13□□□□□ -1.11
CDCA3-211ENST00000603043 FAT4Q6V0I7 4981 aa8.13□□□□□ -1.11
CDCA3-211ENST00000603043 SPINK7P58062 85 aa8.1□□□□□ -1.11
CDCA3-211ENST00000603043 HRES1P13985 223 aa8.06□□□□□ -1.12
CDCA3-211ENST00000603043 KRTAP19-2Q3LHN2 52 aa8.05□□□□□ -1.12
CDCA3-211ENST00000603043 LCE2CQ5TA81 110 aa8.01□□□□□ -1.13
CDCA3-211ENST00000603043 LCE2AQ5TA79 106 aaPredicted RBP8□□□□□ -1.13
CDCA3-211ENST00000603043 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
CDCA3-211ENST00000603043 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
CDCA3-211ENST00000603043 Q5W150 140 aa7.94□□□□□ -1.14
CDCA3-211ENST00000603043 H3BS24 57 aa7.92□□□□□ -1.14
CDCA3-211ENST00000603043 ACYP2P14621 99 aa7.91□□□□□ -1.14
CDCA3-211ENST00000603043 PRAC1Q96KF2 57 aa7.91□□□□□ -1.14
CDCA3-211ENST00000603043 MT1HP80294 61 aa7.9□□□□□ -1.14
CDCA3-211ENST00000603043 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
CDCA3-211ENST00000603043 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
CDCA3-211ENST00000603043 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
CDCA3-211ENST00000603043 A0A1B0GU69 56 aa7.83□□□□□ -1.16
CDCA3-211ENST00000603043 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
CDCA3-211ENST00000603043 DMAC1Q96GE9 116 aa7.81□□□□□ -1.16
CDCA3-211ENST00000603043 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
CDCA3-211ENST00000603043 M0R2T5 61 aa7.8□□□□□ -1.16
CDCA3-211ENST00000603043 UQCR11O14957 56 aa7.79□□□□□ -1.16
CDCA3-211ENST00000603043 MIR22HGQ0VDD5 57 aa7.79□□□□□ -1.16
CDCA3-211ENST00000603043 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
CDCA3-211ENST00000603043 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
CDCA3-211ENST00000603043 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
CDCA3-211ENST00000603043 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
CDCA3-211ENST00000603043 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
CDCA3-211ENST00000603043 KRTAP9-8Q9BYQ0 159 aa7.52□□□□□ -1.21
CDCA3-211ENST00000603043 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
CDCA3-211ENST00000603043 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
CDCA3-211ENST00000603043 S4R3F8 94 aa7.47□□□□□ -1.21
CDCA3-211ENST00000603043 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.21
CDCA3-211ENST00000603043 MT2AP02795 61 aa7.46□□□□□ -1.22
CDCA3-211ENST00000603043 ROMO1P60602 79 aa7.44□□□□□ -1.22
CDCA3-211ENST00000603043 MT1FP04733 61 aa7.4□□□□□ -1.23
CDCA3-211ENST00000603043 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
CDCA3-211ENST00000603043 H0YAA0 97 aa7.33□□□□□ -1.24
CDCA3-211ENST00000603043 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
CDCA3-211ENST00000603043 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
CDCA3-211ENST00000603043 FSIP2Q5CZC0 6907 aa7.27□□□□□ -1.24
CDCA3-211ENST00000603043 A0A1B0GU33 70 aa7.27□□□□□ -1.25
CDCA3-211ENST00000603043 A0A0A0MQY5 61 aa7.26□□□□□ -1.25
CDCA3-211ENST00000603043 K7ERS5 55 aa7.26□□□□□ -1.25
CDCA3-211ENST00000603043 LCE2BO14633 110 aa7.17□□□□□ -1.26
CDCA3-211ENST00000603043 P0C880 135 aa7.17□□□□□ -1.26
CDCA3-211ENST00000603043 KRTAP9-6A0A140TA67 174 aa7.15□□□□□ -1.27
CDCA3-211ENST00000603043 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.27
CDCA3-211ENST00000603043 USH2AO75445 5202 aa7.13□□□□□ -1.27
CDCA3-211ENST00000603043 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
CDCA3-211ENST00000603043 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
CDCA3-211ENST00000603043 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
CDCA3-211ENST00000603043 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
CDCA3-211ENST00000603043 SSPOA2VEC9 5147 aa7.01□□□□□ -1.29
CDCA3-211ENST00000603043 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
CDCA3-211ENST00000603043 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
CDCA3-211ENST00000603043 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
CDCA3-211ENST00000603043 NDUFAF8A1L188 74 aa6.88□□□□□ -1.31
CDCA3-211ENST00000603043 MT1BP07438 61 aa6.87□□□□□ -1.31
CDCA3-211ENST00000603043 R4GN34 69 aa6.87□□□□□ -1.31
CDCA3-211ENST00000603043 KRTAP19-6Q3LI70 58 aa6.86□□□□□ -1.31
CDCA3-211ENST00000603043 M0QZ58 72 aa6.82□□□□□ -1.32
CDCA3-211ENST00000603043 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
CDCA3-211ENST00000603043 KRTAP13-4Q3LI77 160 aa6.75□□□□□ -1.33
CDCA3-211ENST00000603043 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
CDCA3-211ENST00000603043 A0A0D9SG42 100 aa6.75□□□□□ -1.33
CDCA3-211ENST00000603043 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
CDCA3-211ENST00000603043 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
CDCA3-211ENST00000603043 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
CDCA3-211ENST00000603043 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
CDCA3-211ENST00000603043 MACF1Q9UPN3 7388 aaKnown RBP6.59□□□□□ -1.35
CDCA3-211ENST00000603043 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
CDCA3-211ENST00000603043 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
CDCA3-211ENST00000603043 MT1XP80297 61 aa6.53□□□□□ -1.36
CDCA3-211ENST00000603043 LUZP6Q538Z0 58 aa6.49□□□□□ -1.37
CDCA3-211ENST00000603043 KRTAP9-7A8MTY7 169 aa6.46□□□□□ -1.37
CDCA3-211ENST00000603043 SYNE2Q8WXH0 6885 aaKnown RBP6.45□□□□□ -1.38
CDCA3-211ENST00000603043 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
CDCA3-211ENST00000603043 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
CDCA3-211ENST00000603043 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
CDCA3-211ENST00000603043 KMT2DO14686 5537 aa6.24□□□□□ -1.41
CDCA3-211ENST00000603043 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
CDCA3-211ENST00000603043 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
CDCA3-211ENST00000603043 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
CDCA3-211ENST00000603043 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.43
CDCA3-211ENST00000603043 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
CDCA3-211ENST00000603043 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
CDCA3-211ENST00000603043 MUC12Q9UKN1 5478 aa6.08□□□□□ -1.44
CDCA3-211ENST00000603043 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
CDCA3-211ENST00000603043 NEBP20929 6669 aa5.98□□□□□ -1.45
CDCA3-211ENST00000603043 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
CDCA3-211ENST00000603043 TNP1P09430 55 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms