RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
PPFIA3-206ENST00000602655 Q5VSD8 79 aa8.54□□□□□ -1.04
PPFIA3-206ENST00000602655 A0A0A0MQY5 61 aa8.52□□□□□ -1.05
PPFIA3-206ENST00000602655 RYR1P21817 5038 aa8.49□□□□□ -1.05
PPFIA3-206ENST00000602655 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
PPFIA3-206ENST00000602655 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
PPFIA3-206ENST00000602655 H1FX-AS1Q4G0G2 97 aa8.46□□□□□ -1.05
PPFIA3-206ENST00000602655 A0A0D9SG42 100 aa8.44□□□□□ -1.06
PPFIA3-206ENST00000602655 C20orf166-AS1Q96NR2 134 aa8.43□□□□□ -1.06
PPFIA3-206ENST00000602655 KRTAP17-1Q9BYP8 105 aa8.42□□□□□ -1.06
PPFIA3-206ENST00000602655 C10orf95Q9H7T3 257 aa8.38□□□□□ -1.07
PPFIA3-206ENST00000602655 HSPG2P98160 4391 aa8.35□□□□□ -1.07
PPFIA3-206ENST00000602655 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
PPFIA3-206ENST00000602655 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
PPFIA3-206ENST00000602655 COX6B2Q6YFQ2 88 aa8.29□□□□□ -1.08
PPFIA3-206ENST00000602655 TPRXLQ17RH7 258 aa8.27□□□□□ -1.08
PPFIA3-206ENST00000602655 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
PPFIA3-206ENST00000602655 PKHD1L1Q86WI1 4243 aa8.15□□□□□ -1.1
PPFIA3-206ENST00000602655 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
PPFIA3-206ENST00000602655 LUZP6Q538Z0 58 aa8.13□□□□□ -1.11
PPFIA3-206ENST00000602655 J3QL48 77 aa8.13□□□□□ -1.11
PPFIA3-206ENST00000602655 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
PPFIA3-206ENST00000602655 HERC2O95714 4834 aa8.13□□□□□ -1.11
PPFIA3-206ENST00000602655 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
PPFIA3-206ENST00000602655 LRP2P98164 4655 aa8.07□□□□□ -1.12
PPFIA3-206ENST00000602655 LPAP08519 4548 aa8.05□□□□□ -1.12
PPFIA3-206ENST00000602655 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
PPFIA3-206ENST00000602655 MT1HL1P0DM35 61 aa7.98□□□□□ -1.13
PPFIA3-206ENST00000602655 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
PPFIA3-206ENST00000602655 TNXBP22105 4242 aa7.96□□□□□ -1.14
PPFIA3-206ENST00000602655 HERC1Q15751 4861 aa7.95□□□□□ -1.14
PPFIA3-206ENST00000602655 S4R3F8 94 aa7.93□□□□□ -1.14
PPFIA3-206ENST00000602655 MUC2Q02817 5179 aa7.91□□□□□ -1.14
PPFIA3-206ENST00000602655 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
PPFIA3-206ENST00000602655 XP32Q5T750 250 aa7.87□□□□□ -1.15
PPFIA3-206ENST00000602655 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
PPFIA3-206ENST00000602655 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
PPFIA3-206ENST00000602655 KRTAP10-6P60371 365 aaPredicted RBP7.84□□□□□ -1.15
PPFIA3-206ENST00000602655 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
PPFIA3-206ENST00000602655 RNF213Q63HN8 5207 aa7.73□□□□□ -1.17
PPFIA3-206ENST00000602655 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
PPFIA3-206ENST00000602655 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
PPFIA3-206ENST00000602655 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
PPFIA3-206ENST00000602655 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
PPFIA3-206ENST00000602655 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
PPFIA3-206ENST00000602655 FAT4Q6V0I7 4981 aa7.55□□□□□ -1.2
PPFIA3-206ENST00000602655 SEC61BP60468 96 aaKnown RBP7.47□□□□□ -1.21
PPFIA3-206ENST00000602655 KRTAP4-1Q9BYQ7 146 aa7.46□□□□□ -1.22
PPFIA3-206ENST00000602655 M0QZ58 72 aa7.44□□□□□ -1.22
PPFIA3-206ENST00000602655 HMCN2Q8NDA2 5059 aa7.38□□□□□ -1.23
PPFIA3-206ENST00000602655 R4GN34 69 aa7.37□□□□□ -1.23
PPFIA3-206ENST00000602655 M0R2T5 61 aa7.27□□□□□ -1.25
PPFIA3-206ENST00000602655 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
PPFIA3-206ENST00000602655 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
PPFIA3-206ENST00000602655 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
PPFIA3-206ENST00000602655 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
PPFIA3-206ENST00000602655 FSIP2Q5CZC0 6907 aa6.95□□□□□ -1.3
PPFIA3-206ENST00000602655 KRTAP19-2Q3LHN2 52 aa6.86□□□□□ -1.31
PPFIA3-206ENST00000602655 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
PPFIA3-206ENST00000602655 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
PPFIA3-206ENST00000602655 TNP1P09430 55 aa6.82□□□□□ -1.32
PPFIA3-206ENST00000602655 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
PPFIA3-206ENST00000602655 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
PPFIA3-206ENST00000602655 USH2AO75445 5202 aa6.76□□□□□ -1.33
PPFIA3-206ENST00000602655 MT1HP80294 61 aa6.75□□□□□ -1.33
PPFIA3-206ENST00000602655 MT1FP04733 61 aa6.58□□□□□ -1.36
PPFIA3-206ENST00000602655 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
PPFIA3-206ENST00000602655 INE1O15225 51 aa6.56□□□□□ -1.36
PPFIA3-206ENST00000602655 MT2AP02795 61 aa6.55□□□□□ -1.36
PPFIA3-206ENST00000602655 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
PPFIA3-206ENST00000602655 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
PPFIA3-206ENST00000602655 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
PPFIA3-206ENST00000602655 KMT2DO14686 5537 aa6.33□□□□□ -1.4
PPFIA3-206ENST00000602655 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
PPFIA3-206ENST00000602655 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
PPFIA3-206ENST00000602655 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
PPFIA3-206ENST00000602655 LCE2BO14633 110 aa6.15□□□□□ -1.43
PPFIA3-206ENST00000602655 LCE2AQ5TA79 106 aaPredicted RBP6.15□□□□□ -1.43
PPFIA3-206ENST00000602655 MT1BP07438 61 aa6.14□□□□□ -1.43
PPFIA3-206ENST00000602655 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
PPFIA3-206ENST00000602655 MT1XP80297 61 aa6□□□□□ -1.45
PPFIA3-206ENST00000602655 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
PPFIA3-206ENST00000602655 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
PPFIA3-206ENST00000602655 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
PPFIA3-206ENST00000602655 KRTAP12-3P60328 96 aa5.96□□□□□ -1.45
PPFIA3-206ENST00000602655 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.47
PPFIA3-206ENST00000602655 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.47
PPFIA3-206ENST00000602655 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.47
PPFIA3-206ENST00000602655 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
PPFIA3-206ENST00000602655 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
PPFIA3-206ENST00000602655 MUC12Q9UKN1 5478 aa5.76□□□□□ -1.49
PPFIA3-206ENST00000602655 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
PPFIA3-206ENST00000602655 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
PPFIA3-206ENST00000602655 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
PPFIA3-206ENST00000602655 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
PPFIA3-206ENST00000602655 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
PPFIA3-206ENST00000602655 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
PPFIA3-206ENST00000602655 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
PPFIA3-206ENST00000602655 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
PPFIA3-206ENST00000602655 MDN1Q9NU22 5596 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms