RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 C1orf64Q8NEQ6 169 aa7.99□□□□□ -1.13
SHKBP1-227ENST00000602011 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
SHKBP1-227ENST00000602011 IMUPQ9GZP8 106 aa7.98□□□□□ -1.13
SHKBP1-227ENST00000602011 MDN1Q9NU22 5596 aa7.97□□□□□ -1.13
SHKBP1-227ENST00000602011 A0A087WVE0 104 aa7.97□□□□□ -1.13
SHKBP1-227ENST00000602011 KRTAP10-5P60370 271 aa7.96□□□□□ -1.14
SHKBP1-227ENST00000602011 LCA10Q71F78 164 aa7.95□□□□□ -1.14
SHKBP1-227ENST00000602011 KMT2DO14686 5537 aa7.94□□□□□ -1.14
SHKBP1-227ENST00000602011 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
SHKBP1-227ENST00000602011 UQCRQO14949 82 aa7.91□□□□□ -1.14
SHKBP1-227ENST00000602011 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
SHKBP1-227ENST00000602011 MT-ATP8P03928 68 aa7.89□□□□□ -1.15
SHKBP1-227ENST00000602011 KRTAP5-9P26371 169 aa7.89□□□□□ -1.15
SHKBP1-227ENST00000602011 TRAV22A0A0B4J277 110 aa7.87□□□□□ -1.15
SHKBP1-227ENST00000602011 SCGB1A1P11684 91 aa7.87□□□□□ -1.15
SHKBP1-227ENST00000602011 PCP4P48539 62 aa7.87□□□□□ -1.15
SHKBP1-227ENST00000602011 ATOX1O00244 68 aa7.85□□□□□ -1.15
SHKBP1-227ENST00000602011 OCR1Q9BZK8 76 aa7.82□□□□□ -1.16
SHKBP1-227ENST00000602011 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
SHKBP1-227ENST00000602011 H0Y9P7 68 aa7.79□□□□□ -1.16
SHKBP1-227ENST00000602011 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
SHKBP1-227ENST00000602011 MP68P56378 58 aa7.78□□□□□ -1.16
SHKBP1-227ENST00000602011 SMIM20Q8N5G0 67 aa7.78□□□□□ -1.16
SHKBP1-227ENST00000602011 CYP4F30PQ9H0H9 118 aa7.78□□□□□ -1.16
SHKBP1-227ENST00000602011 H3BPC8 53 aa7.74□□□□□ -1.17
SHKBP1-227ENST00000602011 KRTAP2-3P0C7H8 128 aa7.73□□□□□ -1.17
SHKBP1-227ENST00000602011 KRTAP2-4Q9BYR9 128 aa7.73□□□□□ -1.17
SHKBP1-227ENST00000602011 LINC00208Q96KT6 92 aa7.71□□□□□ -1.18
SHKBP1-227ENST00000602011 TRAV7A0A075B6U4 112 aa7.7□□□□□ -1.18
SHKBP1-227ENST00000602011 H0YAA0 97 aa7.7□□□□□ -1.18
SHKBP1-227ENST00000602011 NDUFC1O43677 76 aa7.66□□□□□ -1.18
SHKBP1-227ENST00000602011 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
SHKBP1-227ENST00000602011 SPRR2EP22531 72 aa7.61□□□□□ -1.19
SHKBP1-227ENST00000602011 SPRR2BP35325 72 aa7.61□□□□□ -1.19
SHKBP1-227ENST00000602011 SPRR2AP35326 72 aa7.61□□□□□ -1.19
SHKBP1-227ENST00000602011 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
SHKBP1-227ENST00000602011 SERP2Q8N6R1 65 aa7.58□□□□□ -1.2
SHKBP1-227ENST00000602011 A8MUN3 132 aa7.56□□□□□ -1.2
SHKBP1-227ENST00000602011 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
SHKBP1-227ENST00000602011 ADM2Q7Z4H4 148 aa7.51□□□□□ -1.21
SHKBP1-227ENST00000602011 MT1XP80297 61 aa7.46□□□□□ -1.22
SHKBP1-227ENST00000602011 KRTAP2-2Q9BYT5 123 aa7.46□□□□□ -1.22
SHKBP1-227ENST00000602011 KRTAP2-1Q9BYU5 128 aa7.46□□□□□ -1.22
SHKBP1-227ENST00000602011 COX7CP15954 63 aa7.45□□□□□ -1.22
SHKBP1-227ENST00000602011 KRTAP8-1Q8IUC2 63 aa7.45□□□□□ -1.22
SHKBP1-227ENST00000602011 C20orf197Q8N268 126 aa7.45□□□□□ -1.22
SHKBP1-227ENST00000602011 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
SHKBP1-227ENST00000602011 ANAPC13Q9BS18 74 aa7.44□□□□□ -1.22
SHKBP1-227ENST00000602011 SNURFQ9Y675 71 aa7.44□□□□□ -1.22
SHKBP1-227ENST00000602011 LCE1AQ5T7P2 110 aa7.43□□□□□ -1.22
SHKBP1-227ENST00000602011 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
SHKBP1-227ENST00000602011 R4GN34 69 aa7.4□□□□□ -1.22
SHKBP1-227ENST00000602011 ACYP2P14621 99 aa7.37□□□□□ -1.23
SHKBP1-227ENST00000602011 SPANXA2-OT1Q8N9U9 137 aa7.36□□□□□ -1.23
SHKBP1-227ENST00000602011 SPRR2DP22532 72 aa7.35□□□□□ -1.23
SHKBP1-227ENST00000602011 M0QZ58 72 aa7.28□□□□□ -1.24
SHKBP1-227ENST00000602011 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
SHKBP1-227ENST00000602011 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.25
SHKBP1-227ENST00000602011 P0C880 135 aa7.25□□□□□ -1.25
SHKBP1-227ENST00000602011 SPTSSBQ8NFR3 76 aa7.23□□□□□ -1.25
SHKBP1-227ENST00000602011 H7BZZ5 65 aa7.21□□□□□ -1.26
SHKBP1-227ENST00000602011 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
SHKBP1-227ENST00000602011 CCDC179H3BU77 68 aa7.18□□□□□ -1.26
SHKBP1-227ENST00000602011 LCE3BQ5TA77 95 aa7.18□□□□□ -1.26
SHKBP1-227ENST00000602011 LINC01554Q52M75 96 aa7.16□□□□□ -1.26
SHKBP1-227ENST00000602011 CYSTM1Q9H1C7 97 aa7.16□□□□□ -1.26
SHKBP1-227ENST00000602011 KRTAP3-2Q9BYR7 98 aa7.15□□□□□ -1.26
SHKBP1-227ENST00000602011 KRTAP10-12P60413 245 aa7.13□□□□□ -1.27
SHKBP1-227ENST00000602011 GPR98Q8WXG9 6306 aa7.09□□□□□ -1.27
SHKBP1-227ENST00000602011 KRTAP10-7P60409 375 aaPredicted RBP7.08□□□□□ -1.28
SHKBP1-227ENST00000602011 COA5Q86WW8 74 aa7.08□□□□□ -1.28
SHKBP1-227ENST00000602011 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
SHKBP1-227ENST00000602011 TMEM258P61165 79 aa7□□□□□ -1.29
SHKBP1-227ENST00000602011 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
SHKBP1-227ENST00000602011 DSTQ03001 7570 aaKnown RBP6.91□□□□□ -1.3
SHKBP1-227ENST00000602011 SEC61GP60059 68 aa6.91□□□□□ -1.3
SHKBP1-227ENST00000602011 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
SHKBP1-227ENST00000602011 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
SHKBP1-227ENST00000602011 SVIPQ8NHG7 77 aa6.77□□□□□ -1.33
SHKBP1-227ENST00000602011 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
SHKBP1-227ENST00000602011 A0A1B0GU69 56 aa6.75□□□□□ -1.33
SHKBP1-227ENST00000602011 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
SHKBP1-227ENST00000602011 SMIM26A0A096LP01 95 aa6.71□□□□□ -1.34
SHKBP1-227ENST00000602011 A0A1B0GU33 70 aa6.71□□□□□ -1.34
SHKBP1-227ENST00000602011 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
SHKBP1-227ENST00000602011 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
SHKBP1-227ENST00000602011 KRTAP19-3Q7Z4W3 81 aa6.68□□□□□ -1.34
SHKBP1-227ENST00000602011 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
SHKBP1-227ENST00000602011 MT1EP04732 61 aa6.64□□□□□ -1.35
SHKBP1-227ENST00000602011 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
SHKBP1-227ENST00000602011 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
SHKBP1-227ENST00000602011 V9GYY9 64 aa6.61□□□□□ -1.35
SHKBP1-227ENST00000602011 SPATA8Q6RVD6 105 aa6.56□□□□□ -1.36
SHKBP1-227ENST00000602011 HMCN1Q96RW7 5635 aa6.56□□□□□ -1.36
SHKBP1-227ENST00000602011 MT1GP13640 62 aa6.55□□□□□ -1.36
SHKBP1-227ENST00000602011 Q1T7F1 81 aa6.53□□□□□ -1.36
SHKBP1-227ENST00000602011 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
SHKBP1-227ENST00000602011 MT4P47944 62 aa6.51□□□□□ -1.37
SHKBP1-227ENST00000602011 A0A0D9SG42 100 aa6.5□□□□□ -1.37
SHKBP1-227ENST00000602011 AHNAK2Q8IVF2 5795 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 265 ms