RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 LCE2CQ5TA81 110 aa11.09□□□□□ -0.63
IRF3-228ENST00000601291 SPTSSBQ8NFR3 76 aa11.07□□□□□ -0.64
IRF3-228ENST00000601291 RPS28P62857 69 aaKnown RBP11.07□□□□□ -0.64
IRF3-228ENST00000601291 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
IRF3-228ENST00000601291 CSAG1Q6PB30 78 aa10.97□□□□□ -0.65
IRF3-228ENST00000601291 MT1HP80294 61 aa10.92□□□□□ -0.66
IRF3-228ENST00000601291 FAT4Q6V0I7 4981 aa10.9□□□□□ -0.66
IRF3-228ENST00000601291 SMIM26A0A096LP01 95 aa10.89□□□□□ -0.67
IRF3-228ENST00000601291 FLGP20930 4061 aaPredicted RBP10.89□□□□□ -0.67
IRF3-228ENST00000601291 M0R2T5 61 aa10.86□□□□□ -0.67
IRF3-228ENST00000601291 V9GYY9 64 aa10.76□□□□□ -0.69
IRF3-228ENST00000601291 LINC01558Q9Y6Z2 57 aa10.73□□□□□ -0.69
IRF3-228ENST00000601291 Q1T7F1 81 aa10.73□□□□□ -0.69
IRF3-228ENST00000601291 SEC61GP60059 68 aa10.72□□□□□ -0.69
IRF3-228ENST00000601291 H0YAA0 97 aa10.69□□□□□ -0.7
IRF3-228ENST00000601291 A0A1B0GU69 56 aa10.68□□□□□ -0.7
IRF3-228ENST00000601291 PRR15LQ9BU68 103 aa10.65□□□□□ -0.7
IRF3-228ENST00000601291 LCE2AQ5TA79 106 aaPredicted RBP10.65□□□□□ -0.71
IRF3-228ENST00000601291 ADM2Q7Z4H4 148 aa10.64□□□□□ -0.71
IRF3-228ENST00000601291 KRTAP10-6P60371 365 aaPredicted RBP10.56□□□□□ -0.72
IRF3-228ENST00000601291 KRTAP3-2Q9BYR7 98 aa10.56□□□□□ -0.72
IRF3-228ENST00000601291 PSPHP1O15172 72 aa10.54□□□□□ -0.72
IRF3-228ENST00000601291 P0C880 135 aa10.51□□□□□ -0.73
IRF3-228ENST00000601291 LORP23490 312 aaPredicted RBP10.49□□□□□ -0.73
IRF3-228ENST00000601291 KRTAP9-8Q9BYQ0 159 aa10.46□□□□□ -0.74
IRF3-228ENST00000601291 Q5VV11 94 aa10.43□□□□□ -0.74
IRF3-228ENST00000601291 MT2AP02795 61 aa10.43□□□□□ -0.74
IRF3-228ENST00000601291 A0A1B0GU33 70 aa10.41□□□□□ -0.74
IRF3-228ENST00000601291 KRTAP10-10P60014 251 aa10.37□□□□□ -0.75
IRF3-228ENST00000601291 MT1FP04733 61 aa10.36□□□□□ -0.75
IRF3-228ENST00000601291 CRIPTQ9P021 101 aa10.35□□□□□ -0.75
IRF3-228ENST00000601291 UQCR11O14957 56 aa10.31□□□□□ -0.76
IRF3-228ENST00000601291 R4GN34 69 aa10.31□□□□□ -0.76
IRF3-228ENST00000601291 M0QZ58 72 aa10.29□□□□□ -0.76
IRF3-228ENST00000601291 A6NED7 52 aa10.26□□□□□ -0.77
IRF3-228ENST00000601291 SPATA8Q6RVD6 105 aa10.22□□□□□ -0.77
IRF3-228ENST00000601291 KRTAP13-4Q3LI77 160 aa10.21□□□□□ -0.78
IRF3-228ENST00000601291 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
IRF3-228ENST00000601291 SPRR2GQ9BYE4 73 aa10.12□□□□□ -0.79
IRF3-228ENST00000601291 KRTAP9-3Q9BYQ3 159 aa10.09□□□□□ -0.79
IRF3-228ENST00000601291 LINC01554Q52M75 96 aa10.09□□□□□ -0.79
IRF3-228ENST00000601291 KRTAP19-1Q8IUB9 90 aa10.09□□□□□ -0.79
IRF3-228ENST00000601291 A0A0D9SG42 100 aa10.05□□□□□ -0.8
IRF3-228ENST00000601291 A8MU10 97 aa10.03□□□□□ -0.8
IRF3-228ENST00000601291 CDC42SE1Q9NRR8 79 aa10.03□□□□□ -0.8
IRF3-228ENST00000601291 BRK1Q8WUW1 75 aa9.96□□□□□ -0.82
IRF3-228ENST00000601291 A6NN06 94 aa9.92□□□□□ -0.82
IRF3-228ENST00000601291 KRTAP19-8Q3LI54 63 aa9.88□□□□□ -0.83
IRF3-228ENST00000601291 SPINT4Q6UDR6 99 aa9.84□□□□□ -0.83
IRF3-228ENST00000601291 LCE2BO14633 110 aa9.84□□□□□ -0.83
IRF3-228ENST00000601291 KRTAP12-1P59990 96 aa9.84□□□□□ -0.83
IRF3-228ENST00000601291 K7ERS5 55 aa9.81□□□□□ -0.84
IRF3-228ENST00000601291 PLAC4Q8WY50 150 aa9.8□□□□□ -0.84
IRF3-228ENST00000601291 KRTAP12-2P59991 146 aa9.79□□□□□ -0.84
IRF3-228ENST00000601291 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
IRF3-228ENST00000601291 MT1BP07438 61 aa9.75□□□□□ -0.85
IRF3-228ENST00000601291 CAMK2N1Q7Z7J9 78 aa9.65□□□□□ -0.86
IRF3-228ENST00000601291 PRO0628Q9UI54 55 aa9.61□□□□□ -0.87
IRF3-228ENST00000601291 USH2AO75445 5202 aa9.56□□□□□ -0.88
IRF3-228ENST00000601291 KRTAP9-2Q9BYQ4 174 aa9.51□□□□□ -0.89
IRF3-228ENST00000601291 PRO2289Q9P1D8 64 aa9.41□□□□□ -0.9
IRF3-228ENST00000601291 PMAIP1Q13794 54 aa9.41□□□□□ -0.9
IRF3-228ENST00000601291 MT1XP80297 61 aa9.39□□□□□ -0.91
IRF3-228ENST00000601291 KRTAP10-5P60370 271 aa9.37□□□□□ -0.91
IRF3-228ENST00000601291 KRTAP19-6Q3LI70 58 aa9.33□□□□□ -0.92
IRF3-228ENST00000601291 ROMO1P60602 79 aa9.31□□□□□ -0.92
IRF3-228ENST00000601291 FSIP2Q5CZC0 6907 aa9.3□□□□□ -0.92
IRF3-228ENST00000601291 C10orf95Q9H7T3 257 aa9.3□□□□□ -0.92
IRF3-228ENST00000601291 SSPOA2VEC9 5147 aa9.28□□□□□ -0.92
IRF3-228ENST00000601291 CRCT1Q9UGL9 99 aa9.15□□□□□ -0.95
IRF3-228ENST00000601291 TNP1P09430 55 aa9.12□□□□□ -0.95
IRF3-228ENST00000601291 SVIPQ8NHG7 77 aa9.09□□□□□ -0.95
IRF3-228ENST00000601291 KRTAP25-1Q3LHN0 102 aa9.08□□□□□ -0.96
IRF3-228ENST00000601291 KRTAP10-7P60409 375 aaPredicted RBP8.99□□□□□ -0.97
IRF3-228ENST00000601291 KTN1-AS1Q86SY8 53 aa8.95□□□□□ -0.98
IRF3-228ENST00000601291 FCGBPQ9Y6R7 5405 aaPredicted RBP8.94□□□□□ -0.98
IRF3-228ENST00000601291 KRTAP10-12P60413 245 aa8.92□□□□□ -0.98
IRF3-228ENST00000601291 KRTAP9-6A0A140TA67 174 aa8.87□□□□□ -0.99
IRF3-228ENST00000601291 PRAC1Q96KF2 57 aa8.8□□□□□ -1
IRF3-228ENST00000601291 KRTAP23-1A1A580 65 aa8.77□□□□□ -1.01
IRF3-228ENST00000601291 LCE3AQ5TA76 89 aa8.74□□□□□ -1.01
IRF3-228ENST00000601291 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
IRF3-228ENST00000601291 KRTAP4-8A0A0G2JLE6 195 aa8.68□□□□□ -1.02
IRF3-228ENST00000601291 KRTAP4-8Q9BYQ9 185 aa8.68□□□□□ -1.02
IRF3-228ENST00000601291 MACF1Q9UPN3 7388 aaKnown RBP8.58□□□□□ -1.04
IRF3-228ENST00000601291 KMT2DO14686 5537 aa8.58□□□□□ -1.04
IRF3-228ENST00000601291 KRTAP8-1Q8IUC2 63 aa8.57□□□□□ -1.04
IRF3-228ENST00000601291 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.47□□□□□ -1.05
IRF3-228ENST00000601291 KRTAP19-5Q3LI72 72 aa8.44□□□□□ -1.06
IRF3-228ENST00000601291 KRTAP12-3P60328 96 aa8.41□□□□□ -1.06
IRF3-228ENST00000601291 KRTAP19-7Q3SYF9 63 aa8.37□□□□□ -1.07
IRF3-228ENST00000601291 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
IRF3-228ENST00000601291 SPRR2FQ96RM1 72 aa8.29□□□□□ -1.08
IRF3-228ENST00000601291 MT1EP04732 61 aa8.26□□□□□ -1.09
IRF3-228ENST00000601291 KRTAP5-9P26371 169 aa8.25□□□□□ -1.09
IRF3-228ENST00000601291 KRTAP6-3Q3LI67 103 aa8.22□□□□□ -1.09
IRF3-228ENST00000601291 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
IRF3-228ENST00000601291 KRTAP9-7A8MTY7 169 aa8.09□□□□□ -1.11
IRF3-228ENST00000601291 MT1LQ93083 61 aa8.05□□□□□ -1.12
IRF3-228ENST00000601291 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms