RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 M0R2T5 61 aa11.06□□□□□ -0.64
IRF3-227ENST00000600911 ACYP2P14621 99 aa11.02□□□□□ -0.64
IRF3-227ENST00000600911 KRTAP10-6P60371 365 aaPredicted RBP10.97□□□□□ -0.65
IRF3-227ENST00000600911 LORP23490 312 aaPredicted RBP10.93□□□□□ -0.66
IRF3-227ENST00000600911 TMEM258P61165 79 aa10.93□□□□□ -0.66
IRF3-227ENST00000600911 COA5Q86WW8 74 aa10.91□□□□□ -0.66
IRF3-227ENST00000600911 CSAG1Q6PB30 78 aa10.87□□□□□ -0.67
IRF3-227ENST00000600911 KRTAP9-8Q9BYQ0 159 aa10.86□□□□□ -0.67
IRF3-227ENST00000600911 ATP5EP56381 51 aaPredicted RBP10.84□□□□□ -0.67
IRF3-227ENST00000600911 CHKB-CPT1BH3BT56 60 aa10.82□□□□□ -0.68
IRF3-227ENST00000600911 MT2AP02795 61 aa10.78□□□□□ -0.68
IRF3-227ENST00000600911 MT1FP04733 61 aa10.73□□□□□ -0.69
IRF3-227ENST00000600911 SPTSSBQ8NFR3 76 aa10.62□□□□□ -0.71
IRF3-227ENST00000600911 KRTAP3-2Q9BYR7 98 aa10.6□□□□□ -0.71
IRF3-227ENST00000600911 SERP1Q9Y6X1 66 aa10.6□□□□□ -0.71
IRF3-227ENST00000600911 KRTAP10-10P60014 251 aa10.59□□□□□ -0.71
IRF3-227ENST00000600911 ADM2Q7Z4H4 148 aa10.59□□□□□ -0.71
IRF3-227ENST00000600911 H0YAA0 97 aa10.58□□□□□ -0.72
IRF3-227ENST00000600911 P0C880 135 aa10.55□□□□□ -0.72
IRF3-227ENST00000600911 KRTAP9-3Q9BYQ3 159 aa10.49□□□□□ -0.73
IRF3-227ENST00000600911 KRTAP19-1Q8IUB9 90 aa10.36□□□□□ -0.75
IRF3-227ENST00000600911 RPS28P62857 69 aaKnown RBP10.33□□□□□ -0.76
IRF3-227ENST00000600911 LINC01558Q9Y6Z2 57 aa10.33□□□□□ -0.76
IRF3-227ENST00000600911 LCE2BO14633 110 aa10.31□□□□□ -0.76
IRF3-227ENST00000600911 LCE2DQ5TA82 110 aaPredicted RBP10.29□□□□□ -0.76
IRF3-227ENST00000600911 SPRR2GQ9BYE4 73 aa10.27□□□□□ -0.77
IRF3-227ENST00000600911 A0A1B0GU69 56 aa10.26□□□□□ -0.77
IRF3-227ENST00000600911 SEC61GP60059 68 aa10.24□□□□□ -0.77
IRF3-227ENST00000600911 SMIM26A0A096LP01 95 aa10.23□□□□□ -0.77
IRF3-227ENST00000600911 KRTAP13-4Q3LI77 160 aa10.23□□□□□ -0.77
IRF3-227ENST00000600911 CRIPTQ9P021 101 aa10.23□□□□□ -0.77
IRF3-227ENST00000600911 USH2AO75445 5202 aa10.21□□□□□ -0.77
IRF3-227ENST00000600911 KRTAP9-2Q9BYQ4 174 aa10.2□□□□□ -0.78
IRF3-227ENST00000600911 M0QZ58 72 aa10.19□□□□□ -0.78
IRF3-227ENST00000600911 R4GN34 69 aa10.18□□□□□ -0.78
IRF3-227ENST00000600911 Q1T7F1 81 aa10.18□□□□□ -0.78
IRF3-227ENST00000600911 PRR15LQ9BU68 103 aa10.15□□□□□ -0.79
IRF3-227ENST00000600911 A0A1B0GU33 70 aa10.11□□□□□ -0.79
IRF3-227ENST00000600911 PSPHP1O15172 72 aa10.1□□□□□ -0.79
IRF3-227ENST00000600911 KRTAP19-8Q3LI54 63 aa10.09□□□□□ -0.79
IRF3-227ENST00000600911 SPATA8Q6RVD6 105 aa10.09□□□□□ -0.79
IRF3-227ENST00000600911 MT1BP07438 61 aa10.07□□□□□ -0.8
IRF3-227ENST00000600911 V9GYY9 64 aa10.07□□□□□ -0.8
IRF3-227ENST00000600911 LINC01554Q52M75 96 aa10.04□□□□□ -0.8
IRF3-227ENST00000600911 FSIP2Q5CZC0 6907 aa10.03□□□□□ -0.8
IRF3-227ENST00000600911 Q5VV11 94 aa10.02□□□□□ -0.81
IRF3-227ENST00000600911 SSPOA2VEC9 5147 aa10□□□□□ -0.81
IRF3-227ENST00000600911 A0A0D9SG42 100 aa9.91□□□□□ -0.82
IRF3-227ENST00000600911 A8MU10 97 aa9.9□□□□□ -0.82
IRF3-227ENST00000600911 UQCR11O14957 56 aa9.84□□□□□ -0.83
IRF3-227ENST00000600911 A6NN06 94 aa9.75□□□□□ -0.85
IRF3-227ENST00000600911 SVIPQ8NHG7 77 aa9.75□□□□□ -0.85
IRF3-227ENST00000600911 KRTAP12-1P59990 96 aa9.74□□□□□ -0.85
IRF3-227ENST00000600911 MIR22HGQ0VDD5 57 aa9.74□□□□□ -0.85
IRF3-227ENST00000600911 CRCT1Q9UGL9 99 aa9.73□□□□□ -0.85
IRF3-227ENST00000600911 PLAC4Q8WY50 150 aa9.72□□□□□ -0.85
IRF3-227ENST00000600911 KRTAP12-2P59991 146 aa9.71□□□□□ -0.85
IRF3-227ENST00000600911 A6NED7 52 aa9.71□□□□□ -0.86
IRF3-227ENST00000600911 KRTAP19-6Q3LI70 58 aa9.71□□□□□ -0.86
IRF3-227ENST00000600911 SPINT4Q6UDR6 99 aa9.67□□□□□ -0.86
IRF3-227ENST00000600911 MT1XP80297 61 aa9.62□□□□□ -0.87
IRF3-227ENST00000600911 FCGBPQ9Y6R7 5405 aaPredicted RBP9.59□□□□□ -0.87
IRF3-227ENST00000600911 KRTAP10-5P60370 271 aa9.59□□□□□ -0.87
IRF3-227ENST00000600911 KRTAP9-6A0A140TA67 174 aa9.55□□□□□ -0.88
IRF3-227ENST00000600911 CDC42SE1Q9NRR8 79 aa9.48□□□□□ -0.89
IRF3-227ENST00000600911 CAMK2N1Q7Z7J9 78 aa9.46□□□□□ -0.89
IRF3-227ENST00000600911 PRO2289Q9P1D8 64 aa9.36□□□□□ -0.91
IRF3-227ENST00000600911 BRK1Q8WUW1 75 aa9.28□□□□□ -0.92
IRF3-227ENST00000600911 C10orf95Q9H7T3 257 aa9.27□□□□□ -0.92
IRF3-227ENST00000600911 KRTAP10-7P60409 375 aaPredicted RBP9.24□□□□□ -0.93
IRF3-227ENST00000600911 K7ERS5 55 aa9.23□□□□□ -0.93
IRF3-227ENST00000600911 MACF1Q9UPN3 7388 aaKnown RBP9.18□□□□□ -0.94
IRF3-227ENST00000600911 KMT2DO14686 5537 aa9.17□□□□□ -0.94
IRF3-227ENST00000600911 KRTAP10-12P60413 245 aa9.09□□□□□ -0.95
IRF3-227ENST00000600911 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.05□□□□□ -0.96
IRF3-227ENST00000600911 KRTAP4-8A0A0G2JLE6 195 aa9.03□□□□□ -0.96
IRF3-227ENST00000600911 KRTAP4-8Q9BYQ9 185 aa9.03□□□□□ -0.96
IRF3-227ENST00000600911 SYNE2Q8WXH0 6885 aaKnown RBP8.94□□□□□ -0.98
IRF3-227ENST00000600911 TNP1P09430 55 aa8.92□□□□□ -0.98
IRF3-227ENST00000600911 ROMO1P60602 79 aa8.91□□□□□ -0.98
IRF3-227ENST00000600911 KRTAP25-1Q3LHN0 102 aa8.8□□□□□ -1
IRF3-227ENST00000600911 PRO0628Q9UI54 55 aa8.79□□□□□ -1
IRF3-227ENST00000600911 LCE3AQ5TA76 89 aa8.78□□□□□ -1
IRF3-227ENST00000600911 KRTAP8-1Q8IUC2 63 aa8.76□□□□□ -1.01
IRF3-227ENST00000600911 PMAIP1Q13794 54 aa8.72□□□□□ -1.01
IRF3-227ENST00000600911 KRTAP9-7A8MTY7 169 aa8.69□□□□□ -1.02
IRF3-227ENST00000600911 KRTAP6-3Q3LI67 103 aa8.65□□□□□ -1.02
IRF3-227ENST00000600911 KRTAP5-9P26371 169 aa8.63□□□□□ -1.03
IRF3-227ENST00000600911 KRTAP19-7Q3SYF9 63 aa8.6□□□□□ -1.03
IRF3-227ENST00000600911 MUC12Q9UKN1 5478 aa8.58□□□□□ -1.04
IRF3-227ENST00000600911 KRTAP19-5Q3LI72 72 aa8.58□□□□□ -1.04
IRF3-227ENST00000600911 SPRR2FQ96RM1 72 aa8.58□□□□□ -1.04
IRF3-227ENST00000600911 KRTAP23-1A1A580 65 aa8.46□□□□□ -1.06
IRF3-227ENST00000600911 MT1EP04732 61 aa8.45□□□□□ -1.06
IRF3-227ENST00000600911 MDN1Q9NU22 5596 aa8.42□□□□□ -1.06
IRF3-227ENST00000600911 PRAC1Q96KF2 57 aa8.37□□□□□ -1.07
IRF3-227ENST00000600911 KRTAP12-3P60328 96 aa8.36□□□□□ -1.07
IRF3-227ENST00000600911 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
IRF3-227ENST00000600911 LCE1AQ5T7P2 110 aa8.29□□□□□ -1.08
IRF3-227ENST00000600911 SPRR2EP22531 72 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms