RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 CYSTM1Q9H1C7 97 aa4.2□□□□□ -1.74
SSBP4-208ENST00000600628 SERP1Q9Y6X1 66 aa4.2□□□□□ -1.74
SSBP4-208ENST00000600628 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
SSBP4-208ENST00000600628 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
SSBP4-208ENST00000600628 SNURFQ9Y675 71 aa4.19□□□□□ -1.74
SSBP4-208ENST00000600628 TP53AIP1Q9HCN2 124 aa4.18□□□□□ -1.74
SSBP4-208ENST00000600628 H3BPC8 53 aa4.17□□□□□ -1.74
SSBP4-208ENST00000600628 MP68P56378 58 aa4.17□□□□□ -1.74
SSBP4-208ENST00000600628 C4orf26Q17RF5 130 aa4.15□□□□□ -1.75
SSBP4-208ENST00000600628 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
SSBP4-208ENST00000600628 SMIM26A0A096LP01 95 aa4.13□□□□□ -1.75
SSBP4-208ENST00000600628 CYP4F30PQ9H0H9 118 aa4.12□□□□□ -1.75
SSBP4-208ENST00000600628 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
SSBP4-208ENST00000600628 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
SSBP4-208ENST00000600628 H0Y9P7 68 aa4.09□□□□□ -1.75
SSBP4-208ENST00000600628 SPANXA2-OT1Q8N9U9 137 aa4.09□□□□□ -1.75
SSBP4-208ENST00000600628 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
SSBP4-208ENST00000600628 C1orf64Q8NEQ6 169 aa4.08□□□□□ -1.76
SSBP4-208ENST00000600628 LINC00208Q96KT6 92 aa4.08□□□□□ -1.76
SSBP4-208ENST00000600628 KRTAP3-3Q9BYR6 98 aa4.08□□□□□ -1.76
SSBP4-208ENST00000600628 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
SSBP4-208ENST00000600628 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
SSBP4-208ENST00000600628 LOC101927531A0A1B0GV80 90 aa4.06□□□□□ -1.76
SSBP4-208ENST00000600628 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
SSBP4-208ENST00000600628 LCA10Q71F78 164 aa4.05□□□□□ -1.76
SSBP4-208ENST00000600628 S4R3F8 94 aa4.04□□□□□ -1.76
SSBP4-208ENST00000600628 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
SSBP4-208ENST00000600628 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
SSBP4-208ENST00000600628 V9GYY9 64 aa4.02□□□□□ -1.77
SSBP4-208ENST00000600628 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
SSBP4-208ENST00000600628 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
SSBP4-208ENST00000600628 Q1T7F1 81 aa3.98□□□□□ -1.77
SSBP4-208ENST00000600628 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
SSBP4-208ENST00000600628 A8MUN3 132 aa3.96□□□□□ -1.78
SSBP4-208ENST00000600628 MT1BP07438 61 aa3.96□□□□□ -1.78
SSBP4-208ENST00000600628 H0YAA0 97 aa3.95□□□□□ -1.78
SSBP4-208ENST00000600628 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
SSBP4-208ENST00000600628 COA5Q86WW8 74 aa3.91□□□□□ -1.78
SSBP4-208ENST00000600628 ACYP2P14621 99 aa3.89□□□□□ -1.79
SSBP4-208ENST00000600628 CRIPTQ9P021 101 aa3.89□□□□□ -1.79
SSBP4-208ENST00000600628 Q5VV11 94 aa3.88□□□□□ -1.79
SSBP4-208ENST00000600628 DMAC1Q96GE9 116 aa3.88□□□□□ -1.79
SSBP4-208ENST00000600628 BRK1Q8WUW1 75 aa3.87□□□□□ -1.79
SSBP4-208ENST00000600628 PSPHP1O15172 72 aa3.85□□□□□ -1.79
SSBP4-208ENST00000600628 A6NN06 94 aa3.84□□□□□ -1.79
SSBP4-208ENST00000600628 CHKB-CPT1BH3BT56 60 aa3.84□□□□□ -1.79
SSBP4-208ENST00000600628 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
SSBP4-208ENST00000600628 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
SSBP4-208ENST00000600628 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
SSBP4-208ENST00000600628 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
SSBP4-208ENST00000600628 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
SSBP4-208ENST00000600628 ADM2Q7Z4H4 148 aa3.8□□□□□ -1.8
SSBP4-208ENST00000600628 NEBP20929 6669 aa3.78□□□□□ -1.8
SSBP4-208ENST00000600628 A6NED7 52 aa3.78□□□□□ -1.8
SSBP4-208ENST00000600628 P0C880 135 aa3.78□□□□□ -1.8
SSBP4-208ENST00000600628 SPTSSBQ8NFR3 76 aa3.78□□□□□ -1.8
SSBP4-208ENST00000600628 CDC42SE1Q9NRR8 79 aa3.75□□□□□ -1.81
SSBP4-208ENST00000600628 A0A1B0GU69 56 aa3.74□□□□□ -1.81
SSBP4-208ENST00000600628 MT1XP80297 61 aa3.73□□□□□ -1.81
SSBP4-208ENST00000600628 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
SSBP4-208ENST00000600628 SEC61GP60059 68 aa3.71□□□□□ -1.82
SSBP4-208ENST00000600628 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
SSBP4-208ENST00000600628 KMT2DO14686 5537 aa3.69□□□□□ -1.82
SSBP4-208ENST00000600628 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
SSBP4-208ENST00000600628 R4GN34 69 aa3.69□□□□□ -1.82
SSBP4-208ENST00000600628 UQCR11O14957 56 aa3.67□□□□□ -1.82
SSBP4-208ENST00000600628 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
SSBP4-208ENST00000600628 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
SSBP4-208ENST00000600628 M0QZ58 72 aa3.66□□□□□ -1.82
SSBP4-208ENST00000600628 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
SSBP4-208ENST00000600628 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
SSBP4-208ENST00000600628 SPATA8Q6RVD6 105 aa3.64□□□□□ -1.83
SSBP4-208ENST00000600628 MIR22HGQ0VDD5 57 aa3.63□□□□□ -1.83
SSBP4-208ENST00000600628 A8MU10 97 aa3.6□□□□□ -1.83
SSBP4-208ENST00000600628 LINC01554Q52M75 96 aa3.6□□□□□ -1.83
SSBP4-208ENST00000600628 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
SSBP4-208ENST00000600628 KRTAP13-4Q3LI77 160 aa3.58□□□□□ -1.84
SSBP4-208ENST00000600628 A0A1B0GU33 70 aa3.55□□□□□ -1.84
SSBP4-208ENST00000600628 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
SSBP4-208ENST00000600628 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
SSBP4-208ENST00000600628 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
SSBP4-208ENST00000600628 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
SSBP4-208ENST00000600628 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
SSBP4-208ENST00000600628 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
SSBP4-208ENST00000600628 K7ERS5 55 aa3.51□□□□□ -1.85
SSBP4-208ENST00000600628 KRTAP4-8Q9BYQ9 185 aa3.51□□□□□ -1.85
SSBP4-208ENST00000600628 SPRR2EP22531 72 aa3.48□□□□□ -1.85
SSBP4-208ENST00000600628 SPRR2BP35325 72 aa3.48□□□□□ -1.85
SSBP4-208ENST00000600628 SPRR2AP35326 72 aa3.48□□□□□ -1.85
SSBP4-208ENST00000600628 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
SSBP4-208ENST00000600628 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
SSBP4-208ENST00000600628 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
SSBP4-208ENST00000600628 KRTAP12-1P59990 96 aa3.4□□□□□ -1.87
SSBP4-208ENST00000600628 CAMK2N1Q7Z7J9 78 aa3.39□□□□□ -1.87
SSBP4-208ENST00000600628 SPRR2DP22532 72 aa3.36□□□□□ -1.87
SSBP4-208ENST00000600628 A0A0D9SG42 100 aa3.35□□□□□ -1.87
SSBP4-208ENST00000600628 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
SSBP4-208ENST00000600628 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
SSBP4-208ENST00000600628 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
SSBP4-208ENST00000600628 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms