RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 LCA10Q71F78 164 aa6.53□□□□□ -1.36
SNRPA-208ENST00000600456 TRAV7A0A075B6U4 112 aa6.51□□□□□ -1.37
SNRPA-208ENST00000600456 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
SNRPA-208ENST00000600456 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
SNRPA-208ENST00000600456 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
SNRPA-208ENST00000600456 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
SNRPA-208ENST00000600456 NDUFC1O43677 76 aa6.42□□□□□ -1.38
SNRPA-208ENST00000600456 USH2AO75445 5202 aa6.41□□□□□ -1.38
SNRPA-208ENST00000600456 DMAC1Q96GE9 116 aa6.39□□□□□ -1.39
SNRPA-208ENST00000600456 SERP2Q8N6R1 65 aa6.38□□□□□ -1.39
SNRPA-208ENST00000600456 H0YAA0 97 aa6.32□□□□□ -1.4
SNRPA-208ENST00000600456 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
SNRPA-208ENST00000600456 SNURFQ9Y675 71 aa6.31□□□□□ -1.4
SNRPA-208ENST00000600456 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
SNRPA-208ENST00000600456 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
SNRPA-208ENST00000600456 ACYP2P14621 99 aa6.28□□□□□ -1.4
SNRPA-208ENST00000600456 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
SNRPA-208ENST00000600456 CRIPTQ9P021 101 aa6.27□□□□□ -1.41
SNRPA-208ENST00000600456 SPANXA2-OT1Q8N9U9 137 aa6.26□□□□□ -1.41
SNRPA-208ENST00000600456 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
SNRPA-208ENST00000600456 COX7CP15954 63 aa6.23□□□□□ -1.41
SNRPA-208ENST00000600456 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
SNRPA-208ENST00000600456 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
SNRPA-208ENST00000600456 CHKB-CPT1BH3BT56 60 aa6.17□□□□□ -1.42
SNRPA-208ENST00000600456 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
SNRPA-208ENST00000600456 KRTAP19-6Q3LI70 58 aa6.17□□□□□ -1.42
SNRPA-208ENST00000600456 Q5VV11 94 aa6.15□□□□□ -1.42
SNRPA-208ENST00000600456 ANAPC13Q9BS18 74 aa6.13□□□□□ -1.43
SNRPA-208ENST00000600456 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
SNRPA-208ENST00000600456 MT1BP07438 61 aa6.11□□□□□ -1.43
SNRPA-208ENST00000600456 P0C880 135 aa6.09□□□□□ -1.43
SNRPA-208ENST00000600456 H7BZZ5 65 aa6.08□□□□□ -1.44
SNRPA-208ENST00000600456 R4GN34 69 aa6.06□□□□□ -1.44
SNRPA-208ENST00000600456 CYSTM1Q9H1C7 97 aa6.05□□□□□ -1.44
SNRPA-208ENST00000600456 COA5Q86WW8 74 aa6.03□□□□□ -1.44
SNRPA-208ENST00000600456 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
SNRPA-208ENST00000600456 M0QZ58 72 aa6.01□□□□□ -1.45
SNRPA-208ENST00000600456 A6NN06 94 aa5.98□□□□□ -1.45
SNRPA-208ENST00000600456 CCDC179H3BU77 68 aa5.97□□□□□ -1.45
SNRPA-208ENST00000600456 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
SNRPA-208ENST00000600456 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
SNRPA-208ENST00000600456 ATP5EP56381 51 aaPredicted RBP5.9□□□□□ -1.46
SNRPA-208ENST00000600456 LINC01554Q52M75 96 aa5.89□□□□□ -1.47
SNRPA-208ENST00000600456 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
SNRPA-208ENST00000600456 SEC61GP60059 68 aa5.88□□□□□ -1.47
SNRPA-208ENST00000600456 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
SNRPA-208ENST00000600456 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
SNRPA-208ENST00000600456 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
SNRPA-208ENST00000600456 TMEM258P61165 79 aa5.81□□□□□ -1.48
SNRPA-208ENST00000600456 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
SNRPA-208ENST00000600456 MT1XP80297 61 aa5.79□□□□□ -1.48
SNRPA-208ENST00000600456 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
SNRPA-208ENST00000600456 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
SNRPA-208ENST00000600456 A0A1B0GU33 70 aa5.74□□□□□ -1.49
SNRPA-208ENST00000600456 A0A1B0GU69 56 aa5.74□□□□□ -1.49
SNRPA-208ENST00000600456 KRTAP6-3Q3LI67 103 aa5.72□□□□□ -1.49
SNRPA-208ENST00000600456 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
SNRPA-208ENST00000600456 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
SNRPA-208ENST00000600456 PRR15LQ9BU68 103 aa5.66□□□□□ -1.5
SNRPA-208ENST00000600456 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
SNRPA-208ENST00000600456 SPATA8Q6RVD6 105 aa5.65□□□□□ -1.5
SNRPA-208ENST00000600456 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
SNRPA-208ENST00000600456 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
SNRPA-208ENST00000600456 A0A0D9SG42 100 aa5.62□□□□□ -1.51
SNRPA-208ENST00000600456 CAMK2N1Q7Z7J9 78 aa5.61□□□□□ -1.51
SNRPA-208ENST00000600456 SMIM26A0A096LP01 95 aa5.59□□□□□ -1.51
SNRPA-208ENST00000600456 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
SNRPA-208ENST00000600456 KRTAP12-1P59990 96 aa5.54□□□□□ -1.52
SNRPA-208ENST00000600456 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
SNRPA-208ENST00000600456 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
SNRPA-208ENST00000600456 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
SNRPA-208ENST00000600456 A8MU10 97 aa5.49□□□□□ -1.53
SNRPA-208ENST00000600456 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
SNRPA-208ENST00000600456 KMT2DO14686 5537 aa5.48□□□□□ -1.53
SNRPA-208ENST00000600456 PCP4P48539 62 aa5.47□□□□□ -1.53
SNRPA-208ENST00000600456 V9GYY9 64 aa5.47□□□□□ -1.53
SNRPA-208ENST00000600456 NEBP20929 6669 aa5.47□□□□□ -1.53
SNRPA-208ENST00000600456 UQCR11O14957 56 aa5.46□□□□□ -1.54
SNRPA-208ENST00000600456 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
SNRPA-208ENST00000600456 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
SNRPA-208ENST00000600456 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
SNRPA-208ENST00000600456 Q1T7F1 81 aa5.42□□□□□ -1.54
SNRPA-208ENST00000600456 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
SNRPA-208ENST00000600456 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
SNRPA-208ENST00000600456 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
SNRPA-208ENST00000600456 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
SNRPA-208ENST00000600456 PSPHP1O15172 72 aa5.34□□□□□ -1.55
SNRPA-208ENST00000600456 MIR22HGQ0VDD5 57 aa5.34□□□□□ -1.55
SNRPA-208ENST00000600456 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
SNRPA-208ENST00000600456 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
SNRPA-208ENST00000600456 SPRR2EP22531 72 aa5.29□□□□□ -1.56
SNRPA-208ENST00000600456 SPRR2BP35325 72 aa5.29□□□□□ -1.56
SNRPA-208ENST00000600456 SPRR2AP35326 72 aa5.29□□□□□ -1.56
SNRPA-208ENST00000600456 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
SNRPA-208ENST00000600456 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
SNRPA-208ENST00000600456 TNP1P09430 55 aa5.24□□□□□ -1.57
SNRPA-208ENST00000600456 K7ERS5 55 aa5.23□□□□□ -1.57
SNRPA-208ENST00000600456 A6NED7 52 aa5.2□□□□□ -1.58
SNRPA-208ENST00000600456 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
SNRPA-208ENST00000600456 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms