RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 PCOTHQ58A44 107 aa5.46□□□□□ -1.54
SMG9-207ENST00000598860 FAM236AA0A1B0GUQ0 79 aa5.45□□□□□ -1.54
SMG9-207ENST00000598860 FAM236BA0A1B0GV22 79 aa5.45□□□□□ -1.54
SMG9-207ENST00000598860 SCGB1A1P11684 91 aa5.45□□□□□ -1.54
SMG9-207ENST00000598860 MUC2Q02817 5179 aa5.45□□□□□ -1.54
SMG9-207ENST00000598860 UQCRQO14949 82 aa5.44□□□□□ -1.54
SMG9-207ENST00000598860 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
SMG9-207ENST00000598860 SMIM20Q8N5G0 67 aa5.43□□□□□ -1.54
SMG9-207ENST00000598860 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
SMG9-207ENST00000598860 TRAV22A0A0B4J277 110 aa5.41□□□□□ -1.54
SMG9-207ENST00000598860 ATOX1O00244 68 aa5.41□□□□□ -1.54
SMG9-207ENST00000598860 Q5W150 140 aa5.38□□□□□ -1.55
SMG9-207ENST00000598860 C5orf47Q569G3 176 aa5.37□□□□□ -1.55
SMG9-207ENST00000598860 TRAV7A0A075B6U4 112 aa5.36□□□□□ -1.55
SMG9-207ENST00000598860 MP68P56378 58 aa5.36□□□□□ -1.55
SMG9-207ENST00000598860 C7orf65Q6ZTY9 151 aa5.36□□□□□ -1.55
SMG9-207ENST00000598860 LOC101927531A0A1B0GV80 90 aa5.35□□□□□ -1.55
SMG9-207ENST00000598860 H0Y9P7 68 aa5.35□□□□□ -1.55
SMG9-207ENST00000598860 H3BPC8 53 aa5.35□□□□□ -1.55
SMG9-207ENST00000598860 SPINK7P58062 85 aa5.34□□□□□ -1.55
SMG9-207ENST00000598860 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
SMG9-207ENST00000598860 SERP2Q8N6R1 65 aa5.32□□□□□ -1.56
SMG9-207ENST00000598860 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
SMG9-207ENST00000598860 C1orf64Q8NEQ6 169 aa5.29□□□□□ -1.56
SMG9-207ENST00000598860 LINC00208Q96KT6 92 aa5.29□□□□□ -1.56
SMG9-207ENST00000598860 CYP4F30PQ9H0H9 118 aa5.28□□□□□ -1.56
SMG9-207ENST00000598860 HRES1P13985 223 aa5.27□□□□□ -1.57
SMG9-207ENST00000598860 KRTAP19-2Q3LHN2 52 aa5.27□□□□□ -1.57
SMG9-207ENST00000598860 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
SMG9-207ENST00000598860 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
SMG9-207ENST00000598860 COX7CP15954 63 aa5.26□□□□□ -1.57
SMG9-207ENST00000598860 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
SMG9-207ENST00000598860 ANAPC13Q9BS18 74 aa5.26□□□□□ -1.57
SMG9-207ENST00000598860 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
SMG9-207ENST00000598860 A8MU10 97 aa5.22□□□□□ -1.57
SMG9-207ENST00000598860 MT1HP80294 61 aa5.22□□□□□ -1.57
SMG9-207ENST00000598860 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
SMG9-207ENST00000598860 FAM236DA0A1B0GTK5 79 aa5.21□□□□□ -1.58
SMG9-207ENST00000598860 FAM236CP0DP71 79 aa5.21□□□□□ -1.58
SMG9-207ENST00000598860 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
SMG9-207ENST00000598860 C20orf197Q8N268 126 aa5.21□□□□□ -1.58
SMG9-207ENST00000598860 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
SMG9-207ENST00000598860 M0R2T5 61 aa5.18□□□□□ -1.58
SMG9-207ENST00000598860 C4orf26Q17RF5 130 aa5.17□□□□□ -1.58
SMG9-207ENST00000598860 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
SMG9-207ENST00000598860 NDUFC1O43677 76 aa5.16□□□□□ -1.58
SMG9-207ENST00000598860 KRTAP4-4Q9BYR3 166 aa5.16□□□□□ -1.58
SMG9-207ENST00000598860 A8MUN3 132 aa5.15□□□□□ -1.59
SMG9-207ENST00000598860 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
SMG9-207ENST00000598860 SPANXA2-OT1Q8N9U9 137 aa5.12□□□□□ -1.59
SMG9-207ENST00000598860 CCDC179H3BU77 68 aa5.1□□□□□ -1.59
SMG9-207ENST00000598860 DMAC1Q96GE9 116 aa5.09□□□□□ -1.59
SMG9-207ENST00000598860 H7BZZ5 65 aa5.08□□□□□ -1.6
SMG9-207ENST00000598860 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
SMG9-207ENST00000598860 CYSTM1Q9H1C7 97 aa5.05□□□□□ -1.6
SMG9-207ENST00000598860 ACYP2P14621 99 aa5.04□□□□□ -1.6
SMG9-207ENST00000598860 S4R3F8 94 aa5.04□□□□□ -1.6
SMG9-207ENST00000598860 ATP5EP56381 51 aaPredicted RBP5.02□□□□□ -1.61
SMG9-207ENST00000598860 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
SMG9-207ENST00000598860 TMEM258P61165 79 aa4.99□□□□□ -1.61
SMG9-207ENST00000598860 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
SMG9-207ENST00000598860 LCA10Q71F78 164 aa4.98□□□□□ -1.61
SMG9-207ENST00000598860 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
SMG9-207ENST00000598860 CHKB-CPT1BH3BT56 60 aa4.96□□□□□ -1.62
SMG9-207ENST00000598860 SPTSSBQ8NFR3 76 aa4.95□□□□□ -1.62
SMG9-207ENST00000598860 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
SMG9-207ENST00000598860 COA5Q86WW8 74 aa4.92□□□□□ -1.62
SMG9-207ENST00000598860 MT2AP02795 61 aa4.89□□□□□ -1.63
SMG9-207ENST00000598860 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
SMG9-207ENST00000598860 H0YAA0 97 aa4.86□□□□□ -1.63
SMG9-207ENST00000598860 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
SMG9-207ENST00000598860 MT1FP04733 61 aa4.84□□□□□ -1.63
SMG9-207ENST00000598860 SMIM26A0A096LP01 95 aa4.83□□□□□ -1.64
SMG9-207ENST00000598860 SERP1Q9Y6X1 66 aa4.83□□□□□ -1.64
SMG9-207ENST00000598860 ADM2Q7Z4H4 148 aa4.76□□□□□ -1.65
SMG9-207ENST00000598860 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
SMG9-207ENST00000598860 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
SMG9-207ENST00000598860 USH2AO75445 5202 aa4.69□□□□□ -1.66
SMG9-207ENST00000598860 A0A1B0GU69 56 aa4.69□□□□□ -1.66
SMG9-207ENST00000598860 LINC01558Q9Y6Z2 57 aa4.69□□□□□ -1.66
SMG9-207ENST00000598860 P0C880 135 aa4.68□□□□□ -1.66
SMG9-207ENST00000598860 PRR15LQ9BU68 103 aa4.68□□□□□ -1.66
SMG9-207ENST00000598860 V9GYY9 64 aa4.68□□□□□ -1.66
SMG9-207ENST00000598860 PSPHP1O15172 72 aa4.64□□□□□ -1.67
SMG9-207ENST00000598860 R4GN34 69 aa4.64□□□□□ -1.67
SMG9-207ENST00000598860 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
SMG9-207ENST00000598860 M0QZ58 72 aa4.63□□□□□ -1.67
SMG9-207ENST00000598860 SPRR2GQ9BYE4 73 aa4.63□□□□□ -1.67
SMG9-207ENST00000598860 Q1T7F1 81 aa4.62□□□□□ -1.67
SMG9-207ENST00000598860 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
SMG9-207ENST00000598860 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
SMG9-207ENST00000598860 A0A1B0GU33 70 aa4.59□□□□□ -1.67
SMG9-207ENST00000598860 Q5VV11 94 aa4.58□□□□□ -1.68
SMG9-207ENST00000598860 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
SMG9-207ENST00000598860 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
SMG9-207ENST00000598860 UQCR11O14957 56 aa4.51□□□□□ -1.69
SMG9-207ENST00000598860 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
SMG9-207ENST00000598860 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
SMG9-207ENST00000598860 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
SMG9-207ENST00000598860 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms