RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 SSPOA2VEC9 5147 aa8.48□□□□□ -1.05
ZNF558-204ENST00000596172 A8MUN3 132 aa8.48□□□□□ -1.05
ZNF558-204ENST00000596172 SMIM20Q8N5G0 67 aa8.42□□□□□ -1.06
ZNF558-204ENST00000596172 FAM236AA0A1B0GUQ0 79 aa8.39□□□□□ -1.07
ZNF558-204ENST00000596172 FAM236BA0A1B0GV22 79 aa8.39□□□□□ -1.07
ZNF558-204ENST00000596172 TRAV7A0A075B6U4 112 aa8.38□□□□□ -1.07
ZNF558-204ENST00000596172 NDUFC1O43677 76 aa8.38□□□□□ -1.07
ZNF558-204ENST00000596172 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
ZNF558-204ENST00000596172 DMAC1Q96GE9 116 aa8.3□□□□□ -1.08
ZNF558-204ENST00000596172 H0YAA0 97 aa8.28□□□□□ -1.08
ZNF558-204ENST00000596172 FCGBPQ9Y6R7 5405 aaPredicted RBP8.26□□□□□ -1.09
ZNF558-204ENST00000596172 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
ZNF558-204ENST00000596172 KRTAP19-6Q3LI70 58 aa8.25□□□□□ -1.09
ZNF558-204ENST00000596172 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
ZNF558-204ENST00000596172 SERP2Q8N6R1 65 aa8.18□□□□□ -1.1
ZNF558-204ENST00000596172 KRTAP19-8Q3LI54 63 aa8.17□□□□□ -1.1
ZNF558-204ENST00000596172 ACYP2P14621 99 aa8.15□□□□□ -1.1
ZNF558-204ENST00000596172 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
ZNF558-204ENST00000596172 SNURFQ9Y675 71 aa8.13□□□□□ -1.11
ZNF558-204ENST00000596172 Q5VV11 94 aa8.12□□□□□ -1.11
ZNF558-204ENST00000596172 MT1BP07438 61 aa8.11□□□□□ -1.11
ZNF558-204ENST00000596172 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.1□□□□□ -1.11
ZNF558-204ENST00000596172 C20orf197Q8N268 126 aa8.09□□□□□ -1.11
ZNF558-204ENST00000596172 SPANXA2-OT1Q8N9U9 137 aa8.07□□□□□ -1.12
ZNF558-204ENST00000596172 SPTSSBQ8NFR3 76 aa8.01□□□□□ -1.13
ZNF558-204ENST00000596172 P0C880 135 aa7.98□□□□□ -1.13
ZNF558-204ENST00000596172 COX7CP15954 63 aa7.98□□□□□ -1.13
ZNF558-204ENST00000596172 KRTAP3-2Q9BYR7 98 aa7.98□□□□□ -1.13
ZNF558-204ENST00000596172 MACF1Q9UPN3 7388 aaKnown RBP7.96□□□□□ -1.13
ZNF558-204ENST00000596172 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
ZNF558-204ENST00000596172 A6NN06 94 aa7.92□□□□□ -1.14
ZNF558-204ENST00000596172 KRTAP9-7A8MTY7 169 aa7.92□□□□□ -1.14
ZNF558-204ENST00000596172 R4GN34 69 aa7.92□□□□□ -1.14
ZNF558-204ENST00000596172 KRTAP10-5P60370 271 aa7.89□□□□□ -1.15
ZNF558-204ENST00000596172 M0QZ58 72 aa7.85□□□□□ -1.15
ZNF558-204ENST00000596172 H7BZZ5 65 aa7.81□□□□□ -1.16
ZNF558-204ENST00000596172 SYNE2Q8WXH0 6885 aaKnown RBP7.81□□□□□ -1.16
ZNF558-204ENST00000596172 ANAPC13Q9BS18 74 aa7.79□□□□□ -1.16
ZNF558-204ENST00000596172 COA5Q86WW8 74 aa7.78□□□□□ -1.16
ZNF558-204ENST00000596172 PLAC4Q8WY50 150 aa7.78□□□□□ -1.16
ZNF558-204ENST00000596172 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
ZNF558-204ENST00000596172 KRTAP6-3Q3LI67 103 aa7.69□□□□□ -1.18
ZNF558-204ENST00000596172 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
ZNF558-204ENST00000596172 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
ZNF558-204ENST00000596172 MT1XP80297 61 aa7.66□□□□□ -1.18
ZNF558-204ENST00000596172 CCDC179H3BU77 68 aa7.62□□□□□ -1.19
ZNF558-204ENST00000596172 SEC61GP60059 68 aa7.58□□□□□ -1.2
ZNF558-204ENST00000596172 SERP1Q9Y6X1 66 aa7.56□□□□□ -1.2
ZNF558-204ENST00000596172 KRTAP13-4Q3LI77 160 aa7.54□□□□□ -1.2
ZNF558-204ENST00000596172 ATP5EP56381 51 aaPredicted RBP7.51□□□□□ -1.21
ZNF558-204ENST00000596172 KRTAP12-2P59991 146 aa7.47□□□□□ -1.21
ZNF558-204ENST00000596172 KRTAP5-9P26371 169 aa7.44□□□□□ -1.22
ZNF558-204ENST00000596172 A0A1B0GU33 70 aa7.43□□□□□ -1.22
ZNF558-204ENST00000596172 MUC12Q9UKN1 5478 aa7.38□□□□□ -1.23
ZNF558-204ENST00000596172 A0A1B0GU69 56 aa7.38□□□□□ -1.23
ZNF558-204ENST00000596172 TMEM258P61165 79 aa7.38□□□□□ -1.23
ZNF558-204ENST00000596172 KMT2DO14686 5537 aa7.38□□□□□ -1.23
ZNF558-204ENST00000596172 NEBP20929 6669 aa7.35□□□□□ -1.23
ZNF558-204ENST00000596172 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
ZNF558-204ENST00000596172 A0A0D9SG42 100 aa7.3□□□□□ -1.24
ZNF558-204ENST00000596172 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
ZNF558-204ENST00000596172 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
ZNF558-204ENST00000596172 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
ZNF558-204ENST00000596172 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
ZNF558-204ENST00000596172 MDN1Q9NU22 5596 aa7.26□□□□□ -1.25
ZNF558-204ENST00000596172 PRR15LQ9BU68 103 aa7.25□□□□□ -1.25
ZNF558-204ENST00000596172 LINC01558Q9Y6Z2 57 aa7.24□□□□□ -1.25
ZNF558-204ENST00000596172 SMIM26A0A096LP01 95 aa7.23□□□□□ -1.25
ZNF558-204ENST00000596172 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
ZNF558-204ENST00000596172 KRTAP4-8Q9BYQ9 185 aa7.23□□□□□ -1.25
ZNF558-204ENST00000596172 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
ZNF558-204ENST00000596172 SPRR2FQ96RM1 72 aa7.21□□□□□ -1.26
ZNF558-204ENST00000596172 SPINT4Q6UDR6 99 aa7.2□□□□□ -1.26
ZNF558-204ENST00000596172 A8MU10 97 aa7.12□□□□□ -1.27
ZNF558-204ENST00000596172 SPRR2EP22531 72 aa7.05□□□□□ -1.28
ZNF558-204ENST00000596172 SPRR2BP35325 72 aa7.05□□□□□ -1.28
ZNF558-204ENST00000596172 SPRR2AP35326 72 aa7.05□□□□□ -1.28
ZNF558-204ENST00000596172 UQCR11O14957 56 aa7.02□□□□□ -1.29
ZNF558-204ENST00000596172 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
ZNF558-204ENST00000596172 KRTAP20-1Q3LI63 56 aa6.97□□□□□ -1.29
ZNF558-204ENST00000596172 V9GYY9 64 aa6.97□□□□□ -1.29
ZNF558-204ENST00000596172 Q1T7F1 81 aa6.93□□□□□ -1.3
ZNF558-204ENST00000596172 KRTAP2-3P0C7H8 128 aa6.89□□□□□ -1.31
ZNF558-204ENST00000596172 KRTAP2-4Q9BYR9 128 aa6.89□□□□□ -1.31
ZNF558-204ENST00000596172 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
ZNF558-204ENST00000596172 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
ZNF558-204ENST00000596172 PCP4P48539 62 aa6.85□□□□□ -1.31
ZNF558-204ENST00000596172 KRTAP19-7Q3SYF9 63 aa6.85□□□□□ -1.31
ZNF558-204ENST00000596172 PSPHP1O15172 72 aa6.83□□□□□ -1.32
ZNF558-204ENST00000596172 TNP1P09430 55 aa6.82□□□□□ -1.32
ZNF558-204ENST00000596172 SPRR2DP22532 72 aa6.82□□□□□ -1.32
ZNF558-204ENST00000596172 RPS28P62857 69 aaKnown RBP6.79□□□□□ -1.32
ZNF558-204ENST00000596172 MT1EP04732 61 aa6.78□□□□□ -1.32
ZNF558-204ENST00000596172 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
ZNF558-204ENST00000596172 K7ERS5 55 aa6.7□□□□□ -1.34
ZNF558-204ENST00000596172 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
ZNF558-204ENST00000596172 KRTAP19-3Q7Z4W3 81 aa6.68□□□□□ -1.34
ZNF558-204ENST00000596172 KRTAP2-2Q9BYT5 123 aa6.68□□□□□ -1.34
ZNF558-204ENST00000596172 KRTAP2-1Q9BYU5 128 aa6.68□□□□□ -1.34
ZNF558-204ENST00000596172 LCE3AQ5TA76 89 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms