RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 LCA10Q71F78 164 aa5.11□□□□□ -1.59
SHKBP1-206ENST00000595523 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
SHKBP1-206ENST00000595523 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
SHKBP1-206ENST00000595523 S4R3F8 94 aa5.11□□□□□ -1.59
SHKBP1-206ENST00000595523 LOC101927531A0A1B0GV80 90 aa5.1□□□□□ -1.59
SHKBP1-206ENST00000595523 H0Y9P7 68 aa5.08□□□□□ -1.6
SHKBP1-206ENST00000595523 TMEM258P61165 79 aa5.07□□□□□ -1.6
SHKBP1-206ENST00000595523 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
SHKBP1-206ENST00000595523 OCR1Q9BZK8 76 aa5.05□□□□□ -1.6
SHKBP1-206ENST00000595523 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
SHKBP1-206ENST00000595523 CSAG1Q6PB30 78 aa5.04□□□□□ -1.6
SHKBP1-206ENST00000595523 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
SHKBP1-206ENST00000595523 TRAV7A0A075B6U4 112 aa5.02□□□□□ -1.61
SHKBP1-206ENST00000595523 NDUFC1O43677 76 aa5.01□□□□□ -1.61
SHKBP1-206ENST00000595523 KLKP1Q107X0 134 aa5□□□□□ -1.61
SHKBP1-206ENST00000595523 LINC00208Q96KT6 92 aa5□□□□□ -1.61
SHKBP1-206ENST00000595523 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
SHKBP1-206ENST00000595523 ATP5EP56381 51 aaPredicted RBP4.97□□□□□ -1.61
SHKBP1-206ENST00000595523 MP68P56378 58 aa4.95□□□□□ -1.62
SHKBP1-206ENST00000595523 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
SHKBP1-206ENST00000595523 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
SHKBP1-206ENST00000595523 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
SHKBP1-206ENST00000595523 MT1BP07438 61 aa4.93□□□□□ -1.62
SHKBP1-206ENST00000595523 A8MUN3 132 aa4.92□□□□□ -1.62
SHKBP1-206ENST00000595523 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
SHKBP1-206ENST00000595523 H3BPC8 53 aa4.9□□□□□ -1.63
SHKBP1-206ENST00000595523 SERP1Q9Y6X1 66 aa4.9□□□□□ -1.63
SHKBP1-206ENST00000595523 H7BZZ5 65 aa4.89□□□□□ -1.63
SHKBP1-206ENST00000595523 H0YAA0 97 aa4.88□□□□□ -1.63
SHKBP1-206ENST00000595523 C20orf197Q8N268 126 aa4.88□□□□□ -1.63
SHKBP1-206ENST00000595523 Q5VV11 94 aa4.87□□□□□ -1.63
SHKBP1-206ENST00000595523 DMAC1Q96GE9 116 aa4.85□□□□□ -1.63
SHKBP1-206ENST00000595523 CYSTM1Q9H1C7 97 aa4.85□□□□□ -1.63
SHKBP1-206ENST00000595523 SMIM26A0A096LP01 95 aa4.84□□□□□ -1.63
SHKBP1-206ENST00000595523 CRIPTQ9P021 101 aa4.84□□□□□ -1.63
SHKBP1-206ENST00000595523 ADM2Q7Z4H4 148 aa4.82□□□□□ -1.64
SHKBP1-206ENST00000595523 A6NN06 94 aa4.79□□□□□ -1.64
SHKBP1-206ENST00000595523 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
SHKBP1-206ENST00000595523 P0C880 135 aa4.75□□□□□ -1.65
SHKBP1-206ENST00000595523 SNURFQ9Y675 71 aa4.75□□□□□ -1.65
SHKBP1-206ENST00000595523 KRTAP3-2Q9BYR7 98 aa4.74□□□□□ -1.65
SHKBP1-206ENST00000595523 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
SHKBP1-206ENST00000595523 SPANXA2-OT1Q8N9U9 137 aa4.72□□□□□ -1.65
SHKBP1-206ENST00000595523 ACYP2P14621 99 aa4.7□□□□□ -1.66
SHKBP1-206ENST00000595523 PRO0628Q9UI54 55 aa4.7□□□□□ -1.66
SHKBP1-206ENST00000595523 V9GYY9 64 aa4.7□□□□□ -1.66
SHKBP1-206ENST00000595523 Q1T7F1 81 aa4.67□□□□□ -1.66
SHKBP1-206ENST00000595523 R4GN34 69 aa4.67□□□□□ -1.66
SHKBP1-206ENST00000595523 M0QZ58 72 aa4.66□□□□□ -1.66
SHKBP1-206ENST00000595523 MT1XP80297 61 aa4.63□□□□□ -1.67
SHKBP1-206ENST00000595523 MUC12Q9UKN1 5478 aa4.61□□□□□ -1.67
SHKBP1-206ENST00000595523 CHKB-CPT1BH3BT56 60 aa4.6□□□□□ -1.67
SHKBP1-206ENST00000595523 SPTSSBQ8NFR3 76 aa4.6□□□□□ -1.67
SHKBP1-206ENST00000595523 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
SHKBP1-206ENST00000595523 NEBP20929 6669 aa4.59□□□□□ -1.67
SHKBP1-206ENST00000595523 KMT2DO14686 5537 aa4.59□□□□□ -1.68
SHKBP1-206ENST00000595523 LINC01554Q52M75 96 aa4.57□□□□□ -1.68
SHKBP1-206ENST00000595523 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
SHKBP1-206ENST00000595523 PRO2289Q9P1D8 64 aa4.56□□□□□ -1.68
SHKBP1-206ENST00000595523 COA5Q86WW8 74 aa4.51□□□□□ -1.69
SHKBP1-206ENST00000595523 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
SHKBP1-206ENST00000595523 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
SHKBP1-206ENST00000595523 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
SHKBP1-206ENST00000595523 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
SHKBP1-206ENST00000595523 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
SHKBP1-206ENST00000595523 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
SHKBP1-206ENST00000595523 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
SHKBP1-206ENST00000595523 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
SHKBP1-206ENST00000595523 PSPHP1O15172 72 aa4.41□□□□□ -1.7
SHKBP1-206ENST00000595523 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
SHKBP1-206ENST00000595523 KRTAP10-12P60413 245 aa4.4□□□□□ -1.71
SHKBP1-206ENST00000595523 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.71
SHKBP1-206ENST00000595523 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
SHKBP1-206ENST00000595523 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
SHKBP1-206ENST00000595523 CDC42SE1Q9NRR8 79 aa4.38□□□□□ -1.71
SHKBP1-206ENST00000595523 A6NED7 52 aa4.34□□□□□ -1.71
SHKBP1-206ENST00000595523 SEC61GP60059 68 aa4.34□□□□□ -1.71
SHKBP1-206ENST00000595523 SPRR2EP22531 72 aa4.33□□□□□ -1.72
SHKBP1-206ENST00000595523 SPRR2BP35325 72 aa4.33□□□□□ -1.72
SHKBP1-206ENST00000595523 SPRR2AP35326 72 aa4.33□□□□□ -1.72
SHKBP1-206ENST00000595523 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
SHKBP1-206ENST00000595523 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
SHKBP1-206ENST00000595523 A0A1B0GU33 70 aa4.31□□□□□ -1.72
SHKBP1-206ENST00000595523 A0A0D9SG42 100 aa4.3□□□□□ -1.72
SHKBP1-206ENST00000595523 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
SHKBP1-206ENST00000595523 CAMK2N1Q7Z7J9 78 aa4.29□□□□□ -1.72
SHKBP1-206ENST00000595523 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
SHKBP1-206ENST00000595523 A0A1B0GU69 56 aa4.25□□□□□ -1.73
SHKBP1-206ENST00000595523 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
SHKBP1-206ENST00000595523 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
SHKBP1-206ENST00000595523 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
SHKBP1-206ENST00000595523 UQCR11O14957 56 aa4.22□□□□□ -1.73
SHKBP1-206ENST00000595523 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
SHKBP1-206ENST00000595523 A8MU10 97 aa4.19□□□□□ -1.74
SHKBP1-206ENST00000595523 SPRR2DP22532 72 aa4.17□□□□□ -1.74
SHKBP1-206ENST00000595523 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
SHKBP1-206ENST00000595523 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
SHKBP1-206ENST00000595523 MT1EP04732 61 aa4.1□□□□□ -1.75
SHKBP1-206ENST00000595523 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
SHKBP1-206ENST00000595523 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms